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13 Publications
2025 | Published | Journal Article | IST-REx-ID: 19640 |

Confavreux BJ, Agnes EJ, Zenke F, Sprekeler H, Vogels TP. Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. 2025;21(4). doi:10.1371/journal.pcbi.1012910
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| PubMed | Europe PMC
2024 | Published | Journal Article | IST-REx-ID: 18481 |

Ho RDJG, Kishi K, Majka M, Kicheva A, Zagórski MP. Dynamics of morphogen source formation in a growing tissue. PLoS Computational Biology. 2024;20. doi:10.1371/journal.pcbi.1012508
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| PubMed | Europe PMC
2024 | Published | Journal Article | IST-REx-ID: 15169 |

Chintaluri C, Bejtka M, Sredniawa W, et al. kCSD-python, reliable current source density estimation with quality control. PLoS Computational Biology. 2024;20(3). doi:10.1371/journal.pcbi.1011941
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2024 | Published | Journal Article | IST-REx-ID: 15297 |

Svoboda J, Joshi SS, Tkadlec J, Chatterjee K. Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. 2024;20(3). doi:10.1371/journal.pcbi.1012008
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| arXiv
2022 | Published | Journal Article | IST-REx-ID: 10939 |

Davidović A, Chait RP, Batt G, Ruess J. Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level. PLoS Computational Biology. 2022;18(3). doi:10.1371/journal.pcbi.1009950
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2021 | Published | Journal Article | IST-REx-ID: 10535 |

Bodova K, Szep E, Barton NH. Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. 2021;17(12). doi:10.1371/journal.pcbi.1009661
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| arXiv
2021 | Published | Journal Article | IST-REx-ID: 9381 |

Kleshnina M, Streipert SS, Filar JA, Chatterjee K. Mistakes can stabilise the dynamics of rock-paper-scissors games. PLoS Computational Biology. 2021;17(4). doi:10.1371/journal.pcbi.1008523
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| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 9759 |

Bartlett MJ, Arslan FN, Bankston A, Sarabipour S. Ten simple rules to improve academic work- life balance. PLoS Computational Biology. 2021;17(7). doi:10.1371/journal.pcbi.1009124
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2020 | Published | Journal Article | IST-REx-ID: 8767 |

Kaveh K, McAvoy A, Chatterjee K, Nowak MA. The Moran process on 2-chromatic graphs. PLOS Computational Biology. 2020;16(11). doi:10.1371/journal.pcbi.1008402
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2017 | Published | Journal Article | IST-REx-ID: 680 |

Chalk MJ, Masset P, Gutkin B, Denève S. Sensory noise predicts divisive reshaping of receptive fields. PLoS Computational Biology. 2017;13(6). doi:10.1371/journal.pcbi.1005582
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2017 | Published | Journal Article | IST-REx-ID: 720 |

Humplik J, Tkačik G. Probabilistic models for neural populations that naturally capture global coupling and criticality. PLoS Computational Biology. 2017;13(9). doi:10.1371/journal.pcbi.1005763
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2017 | Published | Journal Article | IST-REx-ID: 696 |

Lukacisinova M, Novak S, Paixao T. Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology. 2017;13(7). doi:10.1371/journal.pcbi.1005609
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2014 | Published | Journal Article | IST-REx-ID: 2257 |

Tkačik G, Marre O, Amodei D, Schneidman E, Bialek W, Berry M. Searching for collective behavior in a large network of sensory neurons. PLoS Computational Biology. 2014;10(1). doi:10.1371/journal.pcbi.1003408
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