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13 Publications
2025 | Published | Journal Article | IST-REx-ID: 19640 | 
Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks
B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).
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| PubMed | Europe PMC
B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).
2024 | Published | Journal Article | IST-REx-ID: 18481 |
Dynamics of morphogen source formation in a growing tissue
R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).
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R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15297 |
Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
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| arXiv
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15169
kCSD-python, reliable current source density estimation with quality control
C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).
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C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).
2022 | Published | Journal Article | IST-REx-ID: 10939 |
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
2021 | Published | Journal Article | IST-REx-ID: 10535 |
Dynamic maximum entropy provides accurate approximation of structured population dynamics
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
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| arXiv
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
2021 | Published | Journal Article | IST-REx-ID: 9759 |
Ten simple rules to improve academic work- life balance
Bartlett, Michael John, Ten simple rules to improve academic work- life balance. PLoS Computational Biology 17 (7). 2021
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| PubMed | Europe PMC
Bartlett, Michael John, Ten simple rules to improve academic work- life balance. PLoS Computational Biology 17 (7). 2021
2021 | Published | Journal Article | IST-REx-ID: 9381 |
Mistakes can stabilise the dynamics of rock-paper-scissors games
Kleshnina, Maria, Mistakes can stabilise the dynamics of rock-paper-scissors games. PLoS Computational Biology 17 (4). 2021
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Kleshnina, Maria, Mistakes can stabilise the dynamics of rock-paper-scissors games. PLoS Computational Biology 17 (4). 2021
2020 | Published | Journal Article | IST-REx-ID: 8767 |
The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
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K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
2017 | Published | Journal Article | IST-REx-ID: 680 |
Sensory noise predicts divisive reshaping of receptive fields
Chalk, Matthew J, Sensory noise predicts divisive reshaping of receptive fields. PLoS Computational Biology 13 (6). 2017
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Chalk, Matthew J, Sensory noise predicts divisive reshaping of receptive fields. PLoS Computational Biology 13 (6). 2017
2017 | Published | Journal Article | IST-REx-ID: 720 |
Probabilistic models for neural populations that naturally capture global coupling and criticality
Humplik, Jan, Probabilistic models for neural populations that naturally capture global coupling and criticality. PLoS Computational Biology 13 (9). 2017
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Humplik, Jan, Probabilistic models for neural populations that naturally capture global coupling and criticality. PLoS Computational Biology 13 (9). 2017
2017 | Published | Journal Article | IST-REx-ID: 696 |
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
Lukacisinova, Marta, Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology 13 (7). 2017
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Lukacisinova, Marta, Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology 13 (7). 2017
2014 | Published | Journal Article | IST-REx-ID: 2257 |
Searching for collective behavior in a large network of sensory neurons
Tkacik, Gasper, Searching for collective behavior in a large network of sensory neurons. PLoS Computational Biology 10 (1). 2014
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Tkacik, Gasper, Searching for collective behavior in a large network of sensory neurons. PLoS Computational Biology 10 (1). 2014