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244 Publications


2019 | Journal Article | IST-REx-ID: 6660 | OA
Geometry-aware scattering compensation for 3D printing
D. Sumin, T. Weyrich, T. Rittig, V. Babaei, T. Nindel, A. Wilkie, P. Didyk, B. Bickel, J. Křivánek, K. Myszkowski, ACM Transactions on Graphics 38 (2019).
[Submitted Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 6896
Modeling cell-cell interactions in the brain using cerebral organoids
B. Oliveira, A.Ç. Yahya, G. Novarino, Brain Research 1724 (2019).
View | DOI | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 7009
Mechanisms of 3D cell migration
K. Yamada, M.K. Sixt, Nature Reviews Molecular Cell Biology 20 (2019) 738–752.
View | DOI | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 7156 | OA
Electro-optic entanglement source for microwave to telecom quantum state transfer
A.R. Rueda Sanchez, W.J. Hease, S. Barzanjeh, J.M. Fink, Npj Quantum Information 5 (2019).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 7422 | OA
eGFRD in all dimensions
T.R. Sokolowski, J. Paijmans, L. Bossen, T. Miedema, M. Wehrens, N.B. Becker, K. Kaizu, K. Takahashi, M. Dogterom, P.R. ten Wolde, The Journal of Chemical Physics 150 (2019).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Conference Paper | IST-REx-ID: 9261
FlexMaps Pavilion: A twisted arc made of mesostructured flat flexible panels
F. Laccone, L. Malomo, J. Perez Rodriguez, N. Pietroni, F. Ponchio, B. Bickel, P. Cignoni, in:, IASS Symposium 2019 - 60th Anniversary Symposium of the International Association for Shell and Spatial Structures; Structural Membranes 2019 - 9th International Conference on Textile Composites and Inflatable Structures, FORM and FORCE, International Center for Numerical Methods in Engineering, 2019, pp. 509–515.
View | WoS
 

2019 | Conference Paper | IST-REx-ID: 14190 | OA
On the transfer of inductive bias from simulation to the real world: a new disentanglement dataset
M.W. Gondal, M. Wüthrich, Đ. Miladinović, F. Locatello, M. Breidt, V. Volchkov, J. Akpo, O. Bachem, B. Schölkopf, S. Bauer, in:, Advances in Neural Information Processing Systems, 2019.
[Preprint] View | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 14299 | OA
Custom-size, functional, and durable DNA origami with design-specific scaffolds
E. FAS, F.M. Praetorius, C. Wachauf, G. Brüggenthies, F. Kohler, B. Kick, K. Kadletz, P. Pham, K. Behler, T. Gerling, H. Dietz, ACS Nano 13 (2019) 5015–5027.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Thesis | IST-REx-ID: 6947 | OA
Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking
F.P. Assen, Lymph Node Mechanics: Deciphering the Interplay between Stroma Contractility, Morphology and Lymphocyte Trafficking, Institute of Science and Technology Austria, 2019.
[Published Version] View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 6486 | OA
Relaminarization of pipe flow by means of 3D-printed shaped honeycombs
J. Kühnen, D. Scarselli, B. Hof, Journal of Fluids Engineering 141 (2019).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2019 | Journal Article | IST-REx-ID: 7117 | OA
X-CAD: Optimizing CAD Models with Extended Finite Elements
C. Hafner, C. Schumacher, E. Knoop, T. Auzinger, B. Bickel, M. Bächer, ACM Transactions on Graphics 38 (2019).
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 11508 | OA
Confirmation of double peaked Lyα emission at z = 6.593: Witnessing a galaxy directly contributing to the reionisation of the universe
J.J. Matthee, D. Sobral, M. Gronke, A. Paulino-Afonso, M. Stefanon, H. Röttgering, Astronomy & Astrophysics 619 (2018).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11584 | OA
Star-forming galaxies are predicted to lie on a fundamental plane of mass, star formation rate, and α-enhancement
J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society: Letters 479 (2018) L34–L39.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Conference Paper | IST-REx-ID: 6164
Sphere construction on the FCC grid interpreted as layered hexagonal grids in 3D
G. Koshti, R. Biswas, G. Largeteau-Skapin, R. Zrour, E. Andres, P. Bhowmick, in:, 19th International Workshop, Springer, Cham, 2018, pp. 82–96.
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2018 | Journal Article | IST-REx-ID: 7722
Signatures of negative selection in the genetic architecture of human complex traits
J. Zeng, R. de Vlaming, Y. Wu, M.R. Robinson, L.R. Lloyd-Jones, L. Yengo, C.X. Yap, A. Xue, J. Sidorenko, A.F. McRae, J.E. Powell, G.W. Montgomery, A. Metspalu, T. Esko, G. Gibson, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 50 (2018) 746–753.
View | DOI
 

2018 | Journal Article | IST-REx-ID: 12607 | OA
Aspect controls the survival of ice cliffs on debris-covered glaciers
P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
[Published Version] View | DOI | Download Published Version (ext.)
 

2018 | Thesis | IST-REx-ID: 201 | OA
Multiple covers with balls
M. Iglesias Ham, Multiple Covers with Balls, Institute of Science and Technology Austria, 2018.
[Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 410 | OA
A micro-CT-based method for quantitative brain lesion characterization and electrode localization
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Scientific Reports 8 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 399 | OA
Calculation of the critical temperature of a dilute Bose gas in the Bogoliubov approximation
M.M. Napiórkowski, R. Reuvers, J. Solovej, EPL 121 (2018).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2018 | Journal Article | IST-REx-ID: 13 | OA
Metamolds: Computational design of silicone molds
T. Alderighi, L. Malomo, D. Giorgi, N. Pietroni, B. Bickel, P. Cignoni, ACM Trans. Graph. 37 (2018).
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Book Chapter | IST-REx-ID: 153
Micro-engineered “pillar forests” to study cell migration in complex but controlled 3D environments
J. Renkawitz, A. Reversat, A.F. Leithner, J. Merrin, M.K. Sixt, in:, Methods in Cell Biology, Academic Press, 2018, pp. 79–91.
View | DOI | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 276 | OA
Nano-scale microfluidics to study 3D chemotaxis at the single cell level
C. Frick, P. Dettinger, J. Renkawitz, A. Jauch, C. Berger, M. Recher, T. Schroeder, M. Mehling, PLoS One 13 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 14 | OA
Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation
S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 326 | OA
Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices
K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 5976 | OA
FlexMaps: Computational design of flat flexible shells for shaping 3D objects
L. Malomo, J. Perez Rodriguez, E. Iarussi, N. Pietroni, E. Miguel, P. Cignoni, B. Bickel, ACM Transactions on Graphics 37 (2018).
[Published Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 6003 | OA
State of the art on stylized fabrication
B. Bickel, P. Cignoni, L. Malomo, N. Pietroni, Computer Graphics Forum 37 (2018) 325–342.
[Submitted Version] View | Files available | DOI | WoS
 

2018 | Journal Article | IST-REx-ID: 163 | OA
Agitation modules: Flexible means to accelerate automated freeze substitution
S. Reipert, H. Goldammer, C. Richardson, M. Goldberg, T. Hawkins, E. Saeckl, W. Kaufmann, S. Antreich, Y. Stierhof, Journal of Histochemistry and Cytochemistry 66 (2018) 903–921.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 6
A micro-CT-based method for characterising lesions and locating electrodes in small animal brains
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Journal of Visualized Experiments 141 (2018).
View | DOI | WoS
 

2017 | Journal Article | IST-REx-ID: 11567 | OA
A 1.4 deg2 blind survey for C II], C III] and C IV at z ∼ 0.7–1.5 – II. Luminosity functions and cosmic average line ratios
A. Stroe, D. Sobral, J.J. Matthee, J. Calhau, I. Oteo, Monthly Notices of the Royal Astronomical Society 471 (2017) 2575–2586.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2017 | Journal Article | IST-REx-ID: 452
Spin it: Optimizing moment of inertia for spinnable objects
M. Bächer, B. Bickel, E. Whiting, O. Sorkine Hornung, Communications of the ACM 60 (2017) 92–99.
View | DOI
 

2017 | Journal Article | IST-REx-ID: 484 | OA
Bogoliubov correction to the mean-field dynamics of interacting bosons
P. Nam, M.M. Napiórkowski, Advances in Theoretical and Mathematical Physics 21 (2017) 683–738.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 

2017 | Journal Article | IST-REx-ID: 5800
On the functionality and usefulness of Quadraginta octants of naive sphere
R. Biswas, P. Bhowmick, Journal of Mathematical Imaging and Vision 59 (2017) 69–83.
View | DOI
 

2017 | Journal Article | IST-REx-ID: 5799
On the polyhedra of graceful spheres and circular geodesics
R. Biswas, P. Bhowmick, V.E. Brimkov, Discrete Applied Mathematics 216 (2017) 362–375.
View | DOI
 

2017 | Conference Paper | IST-REx-ID: 5801
Fast and Efficient Incremental Algorithms for Circular and Spherical Propagation in Integer Space
S. Dwivedi, A. Gupta, S. Roy, R. Biswas, P. Bhowmick, in:, 20th IAPR International Conference, Springer Nature, Cham, 2017, pp. 347–359.
View | DOI
 

2017 | Book Chapter | IST-REx-ID: 5803
Construction of persistent Voronoi diagram on 3D digital plane
R. Biswas, P. Bhowmick, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2017, pp. 93–104.
View | DOI
 

2017 | Journal Article | IST-REx-ID: 698 | OA
Orientation and repositioning of chromosomes correlate with cell geometry dependent gene expression
Y. Wang, M. Nagarajan, C. Uhler, G. Shivashankar, Molecular Biology of the Cell 28 (2017) 1997–2009.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 722 | OA
Shaping 3D root system architecture
E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T. Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K. Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
[Submitted Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 7757
Designing allostery-inspired response in mechanical networks
J.W. Rocks, N. Pashine, I. Bischofberger, C.P. Goodrich, A.J. Liu, S.R. Nagel, Proceedings of the National Academy of Sciences 114 (2017) 2520–2525.
View | DOI
 

2017 | Journal Article | IST-REx-ID: 817 | OA
Efficient 3D-CTF correction for cryo-electron tomography using NovaCTF improves subtomogram averaging resolution to 3.4Å
B. Turoňová, F.K. Schur, W. Wan, J. Briggs, Journal of Structural Biology 199 (2017) 187–195.
[Published Version] View | Files available | DOI
 

2017 | Journal Article | IST-REx-ID: 8240 | OA
Long term storage in liquid nitrogen leads to only minor phenotypic and gene expression changes in the mammary carcinoma model cell line BT474
J. Singer, T.W. Grunt, E. Jensen-Jarolim, J. Singer, Oncotarget 8 (2017) 35076–35087.
[Published Version] View | DOI | Download Published Version (ext.)
 

2017 | Journal Article | IST-REx-ID: 8446
Solid‐state NMR H–N–(C)–H and H–N–C–C 3D/4D correlation experiments for resonance assignment of large proteins
H. Fraga, C. Arnaud, D.F. Gauto, M. Audin, V. Kurauskas, P. Macek, C. Krichel, J. Guan, J. Boisbouvier, R. Sprangers, C. Breyton, P. Schanda, ChemPhysChem 18 (2017) 2697–2703.
View | DOI
 

2017 | Journal Article | IST-REx-ID: 486 | OA
Scattering-aware texture reproduction for 3D printing
O. Elek, D. Sumin, R. Zhang, T. Weyrich, K. Myszkowski, B. Bickel, A. Wilkie, J. Krivanek, ACM Transactions on Graphics 36 (2017).
[Submitted Version] View | Files available | DOI
 

2017 | Conference Paper | IST-REx-ID: 1002 | OA
Functionality-aware retargeting of mechanisms to 3D shapes
R. Zhang, T. Auzinger, D. Ceylan, W. Li, B. Bickel, in:, ACM, 2017.
[Submitted Version] View | Files available | DOI | WoS
 

2017 | Conference Paper | IST-REx-ID: 1001 | OA
CurveUps: Shaping objects from flat plates with tension-actuated curvature
R. Guseinov, E. Miguel, B. Bickel, in:, ACM, 2017.
[Submitted Version] View | Files available | DOI | WoS
 

2017 | Journal Article | IST-REx-ID: 994 | OA
Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules
I. Cherepanov, M. Lemeshko, Physical Review Materials 1 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2016 | Journal Article | IST-REx-ID: 1088
Geometric control and modeling of genome reprogramming
C. Uhler, G.V. Shivashankar, BioArchitecture 6 (2016) 76–84.
View | DOI
 

2016 | Conference Paper | IST-REx-ID: 1099 | OA
FlexMolds: Automatic design of flexible shells for molding
L. Malomo, N. Pietroni, B. Bickel, P. Cignoni, in:, ACM, 2016.
[Submitted Version] View | Files available | DOI
 

2016 | Conference Paper | IST-REx-ID: 1115 | OA
Efficient single sideband microwave to optical conversion using a LiNbO₃ WGM-resonator
A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, in:, IEEE, 2016.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2016 | Conference Paper | IST-REx-ID: 1319
DefSense: computational design of customized deformable input devices
M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.
View | DOI
 

2016 | Conference Paper | IST-REx-ID: 5806
On functionality of quadraginta octants of naive sphere with application to circle drawing
R. Biswas, P. Bhowmick, in:, Discrete Geometry for Computer Imagery, Springer Nature, Cham, 2016, pp. 256–267.
View | DOI
 

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