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244 Publications
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- 4 (current)
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2016 | Book Chapter | IST-REx-ID: 5809
On the connectivity and smoothness of discrete spherical circles
R. Biswas, P. Bhowmick, V.E. Brimkov, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2016, pp. 86–100.
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| DOI
R. Biswas, P. Bhowmick, V.E. Brimkov, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2016, pp. 86–100.
2016 | Journal Article | IST-REx-ID: 983 | 
Thermoelectric transport signatures of Dirac composite fermions in the half-filled Landau level
A. Potter, M. Serbyn, A. Vishwanath, Physical Review X 6 (2016).
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A. Potter, M. Serbyn, A. Vishwanath, Physical Review X 6 (2016).
2016 | Journal Article | IST-REx-ID: 1263 |
Efficient microwave to optical photon conversion: An electro-optical realization
A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, Optica 3 (2016) 597–604.
[Published Version]
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A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, Optica 3 (2016) 597–604.
2016 | Journal Article | IST-REx-ID: 14302
Impact of heterogeneity and lattice bond strength on DNA triangle crystal growth
E. Stahl, F.M. Praetorius, C.C. de Oliveira Mann, K.-P. Hopfner, H. Dietz, ACS Nano 10 (2016) 9156–9164.
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| PubMed | Europe PMC
E. Stahl, F.M. Praetorius, C.C. de Oliveira Mann, K.-P. Hopfner, H. Dietz, ACS Nano 10 (2016) 9156–9164.
2016 | Journal Article | IST-REx-ID: 14304
Design of a molecular support for cryo-EM structure determination
T.G. Martin, T.A.M. Bharat, A.C. Joerger, X. Bai, F.M. Praetorius, A.R. Fersht, H. Dietz, S.H.W. Scheres, PNAS 113 (2016) E7456–E7463.
[Published Version]
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| PubMed | Europe PMC
T.G. Martin, T.A.M. Bharat, A.C. Joerger, X. Bai, F.M. Praetorius, A.R. Fersht, H. Dietz, S.H.W. Scheres, PNAS 113 (2016) E7456–E7463.
2015 | Journal Article | IST-REx-ID: 11668 |
On multiple keyword sponsored search auctions with budgets
R. Colini-Baldeschi, S. Leonardi, M.H. Henzinger, M. Starnberger, ACM Transactions on Economics and Computation 4 (2015).
[Submitted Version]
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R. Colini-Baldeschi, S. Leonardi, M.H. Henzinger, M. Starnberger, ACM Transactions on Economics and Computation 4 (2015).
2015 | Conference Paper | IST-REx-ID: 1483 |
A stable multi-scale kernel for topological machine learning
J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748.
[Preprint]
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J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748.
2015 | Book Chapter | IST-REx-ID: 1596 |
Vertical visibility among parallel polygons in three dimensions
R. Fulek, R. Radoičić, in:, Graph Drawing and Network Visualization, Springer Nature, 2015, pp. 373–379.
[Submitted Version]
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R. Fulek, R. Radoičić, in:, Graph Drawing and Network Visualization, Springer Nature, 2015, pp. 373–379.
2015 | Conference Paper | IST-REx-ID: 1625
Detailed spatio-temporal reconstruction of eyelids
A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, M. Gross, in:, ACM, 2015.
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A. Bermano, T. Beeler, Y. Kozlov, D. Bradley, B. Bickel, M. Gross, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1628 |
Microstructures to control elasticity in 3D printing
C. Schumacher, B. Bickel, J. Rys, S. Marschner, C. Daraio, M. Gross, in:, ACM, 2015.
[Published Version]
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C. Schumacher, B. Bickel, J. Rys, S. Marschner, C. Daraio, M. Gross, in:, ACM, 2015.
2015 | Conference Paper | IST-REx-ID: 1630 |
Learning shape placements by example
P. Guerrero, S. Jeschke, M. Wimmer, P. Wonka, in:, ACM, 2015.
[Submitted Version]
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P. Guerrero, S. Jeschke, M. Wimmer, P. Wonka, in:, ACM, 2015.
2015 | Journal Article | IST-REx-ID: 1684 |
Numerous transitions of sex chromosomes in Diptera
B. Vicoso, D. Bachtrog, PLoS Biology 13 (2015).
[Published Version]
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B. Vicoso, D. Bachtrog, PLoS Biology 13 (2015).
2015 | Journal Article | IST-REx-ID: 1817 |
YAP is essential for tissue tension to ensure vertebrate 3D body shape
Porazinski S, Wang H, Asaoka Y, Behrndt M, Miyamoto T, Morita H, Hata S, Sasaki T, Krens G, Osada Y, Asaka S, Momoi A, Linton S, Miesfeld J, Link B, Senga T, Castillo Morales A, Urrutia A, Shimizu N, Nagase H, Matsuura S, Bagby S, Kondoh H, Nishina H, Heisenberg C-PJ, Furutani Seiki M. 2015. YAP is essential for tissue tension to ensure vertebrate 3D body shape. Nature. 521(7551), 217–221.
[Submitted Version]
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Porazinski S, Wang H, Asaoka Y, Behrndt M, Miyamoto T, Morita H, Hata S, Sasaki T, Krens G, Osada Y, Asaka S, Momoi A, Linton S, Miesfeld J, Link B, Senga T, Castillo Morales A, Urrutia A, Shimizu N, Nagase H, Matsuura S, Bagby S, Kondoh H, Nishina H, Heisenberg C-PJ, Furutani Seiki M. 2015. YAP is essential for tissue tension to ensure vertebrate 3D body shape. Nature. 521(7551), 217–221.
2015 | Journal Article | IST-REx-ID: 1874
A three-plane architectonic atlas of the rat hippocampal region
C.N. Boccara, L. Kjønigsen, I. Hammer, J. Bjaalie, T. Leergaard, M. Witter, Hippocampus 25 (2015) 838–857.
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C.N. Boccara, L. Kjønigsen, I. Hammer, J. Bjaalie, T. Leergaard, M. Witter, Hippocampus 25 (2015) 838–857.
2015 | Journal Article | IST-REx-ID: 1879 |
Developing 3D SEM in a broad biological context
Kremer A, Lippens S, Bartunkova S, Asselbergh B, Blanpain C, Fendrych M, Goossens A, Holt M, Janssens S, Krols M, Larsimont J, Mc Guire C, Nowack M, Saelens X, Schertel A, Schepens B, Slezak M, Timmerman V, Theunis C, Van Brempt R, Visser Y, Guérin C. 2015. Developing 3D SEM in a broad biological context. Journal of Microscopy. 259(2), 80–96.
[Published Version]
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Kremer A, Lippens S, Bartunkova S, Asselbergh B, Blanpain C, Fendrych M, Goossens A, Holt M, Janssens S, Krols M, Larsimont J, Mc Guire C, Nowack M, Saelens X, Schertel A, Schepens B, Slezak M, Timmerman V, Theunis C, Van Brempt R, Visser Y, Guérin C. 2015. Developing 3D SEM in a broad biological context. Journal of Microscopy. 259(2), 80–96.
2015 | Journal Article | IST-REx-ID: 7456
Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals
D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, G. Caruntu, Nanoscale 7 (2015) 12955–12969.
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| PubMed | Europe PMC
D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, G. Caruntu, Nanoscale 7 (2015) 12955–12969.
2015 | Journal Article | IST-REx-ID: 1793 |
DynamicRoots: A software platform for the reconstruction and analysis of growing plant roots
O. Symonova, C. Topp, H. Edelsbrunner, PLoS One 10 (2015).
[Published Version]
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O. Symonova, C. Topp, H. Edelsbrunner, PLoS One 10 (2015).
2015 | Journal Article | IST-REx-ID: 1537 |
Cortical contractility triggers a stochastic switch to fast amoeboid cell motility
V. Ruprecht, S. Wieser, A. Callan Jones, M. Smutny, H. Morita, K. Sako, V. Barone, M. Ritsch Marte, M.K. Sixt, R. Voituriez, C.-P.J. Heisenberg, Cell 160 (2015) 673–685.
[Published Version]
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V. Ruprecht, S. Wieser, A. Callan Jones, M. Smutny, H. Morita, K. Sako, V. Barone, M. Ritsch Marte, M.K. Sixt, R. Voituriez, C.-P.J. Heisenberg, Cell 160 (2015) 673–685.
2014 | Book Chapter | IST-REx-ID: 10893
Toward the extraction of saddle periodic orbits
J. Kasten, J. Reininghaus, W. Reich, G. Scheuermann, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III , Springer, Cham, 2014, pp. 55–69.
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J. Kasten, J. Reininghaus, W. Reich, G. Scheuermann, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III , Springer, Cham, 2014, pp. 55–69.
2014 | Journal Article | IST-REx-ID: 1930
Fast and memory-efficient topological denoising of 2D and 3D scalar fields
D. Günther, A. Jacobson, J. Reininghaus, H. Seidel, O. Sorkine Hornung, T. Weinkauf, IEEE Transactions on Visualization and Computer Graphics 20 (2014) 2585–2594.
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D. Günther, A. Jacobson, J. Reininghaus, H. Seidel, O. Sorkine Hornung, T. Weinkauf, IEEE Transactions on Visualization and Computer Graphics 20 (2014) 2585–2594.
2014 | Conference Paper | IST-REx-ID: 2058 |
Blending liquids
K. Raveendran, C. Wojtan, N. Thuerey, G. Türk, in:, ACM Transactions on Graphics, ACM, 2014.
[Submitted Version]
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K. Raveendran, C. Wojtan, N. Thuerey, G. Türk, in:, ACM Transactions on Graphics, ACM, 2014.
2014 | Conference Paper | IST-REx-ID: 2081
Designing inflatable structures
M. Skouras, B. Thomaszewski, P. Kaufmann, A. Garg, B. Bickel, E. Grinspun, M. Gross, in:, ACM, 2014.
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M. Skouras, B. Thomaszewski, P. Kaufmann, A. Garg, B. Bickel, E. Grinspun, M. Gross, in:, ACM, 2014.
2014 | Conference Paper | IST-REx-ID: 2080
Spin-It: Optimizing moment of inertia for spinnable objects
M. Bac̈Her, E. Whiting, B. Bickel, O. Sorkine Hornung, in:, ACM, 2014.
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M. Bac̈Her, E. Whiting, B. Bickel, O. Sorkine Hornung, in:, ACM, 2014.
2014 | Journal Article | IST-REx-ID: 2261 |
DICE, an efficient system for iterative genomic editing in human pluripotent stem cells
F. Zhu, M. Gamboa, A. Farruggio, S. Hippenmeyer, B. Tasic, B. Schüle, Y. Chen Tsai, M. Calos, Nucleic Acids Research 42 (2014).
[Preprint]
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F. Zhu, M. Gamboa, A. Farruggio, S. Hippenmeyer, B. Tasic, B. Schüle, Y. Chen Tsai, M. Calos, Nucleic Acids Research 42 (2014).
2014 | Conference Paper | IST-REx-ID: 5810
On Finding Spherical Geodesic Paths and Circles in ℤ3
R. Biswas, P. Bhowmick, 8668 (2014) 396–409.
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R. Biswas, P. Bhowmick, 8668 (2014) 396–409.
2014 | Journal Article | IST-REx-ID: 927
Theory of epithelial sheet morphology in three dimensions
E.B. Hannezo, J. Prost, J. Joanny, PNAS 111 (2014) 27–32.
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E.B. Hannezo, J. Prost, J. Joanny, PNAS 111 (2014) 27–32.
2013 | Journal Article | IST-REx-ID: 11520 |
The dynamics of z=0.8 H-alpha-selected star-forming galaxies from KMOS/CF-HiZELS
D. Sobral, A.M. Swinbank, J.P. Stott, J.J. Matthee, R.G. Bower, I. Smail, P. Best, J.E. Geach, R.M. Sharples, The Astrophysical Journal 779 (2013).
[Preprint]
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| arXiv
D. Sobral, A.M. Swinbank, J.P. Stott, J.J. Matthee, R.G. Bower, I. Smail, P. Best, J.E. Geach, R.M. Sharples, The Astrophysical Journal 779 (2013).
2013 | Journal Article | IST-REx-ID: 2108
Computational design of mechanical characters
S. Coros, B. Thomaszewski, G. Noris, S. Sueda, M. Forberg, R. Sumner, W. Matusik, B. Bickel, ACM Transactions on Graphics 32 (2013).
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S. Coros, B. Thomaszewski, G. Noris, S. Sueda, M. Forberg, R. Sumner, W. Matusik, B. Bickel, ACM Transactions on Graphics 32 (2013).
2013 | Journal Article | IST-REx-ID: 2113
3D printing spatially varying BRDFs
O. Rouiller, B. Bickel, J. Kautz, W. Matusik, M. Alexa, IEEE Computer Graphics and Applications 33 (2013) 48–57.
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O. Rouiller, B. Bickel, J. Kautz, W. Matusik, M. Alexa, IEEE Computer Graphics and Applications 33 (2013) 48–57.
2013 | Journal Article | IST-REx-ID: 2114
Computational aspects of fabrication: Modeling, design and 3d printing
B. Bickel, M. Alexa, IEEE Computer Graphics and Applications 33 (2013) 24–25.
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B. Bickel, M. Alexa, IEEE Computer Graphics and Applications 33 (2013) 24–25.
2013 | Journal Article | IST-REx-ID: 2269
Analytic Visibility on the GPU
T. Auzinger, M. Wimmer, S. Jeschke, Computer Graphics Forum 32 (2013) 409–418.
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T. Auzinger, M. Wimmer, S. Jeschke, Computer Graphics Forum 32 (2013) 409–418.
2013 | Journal Article | IST-REx-ID: 2471 |
Mechanism of protein kinetic stabilization by engineered disulfide crosslinks
I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
[Published Version]
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I. Sanchez-Romero, A. Ariza, K. Wilson, M. Skjøt, J. Vind, L. De Maria, L. Skov, J. Sánchez Ruiz, PLoS One 8 (2013).
2013 | Journal Article | IST-REx-ID: 2822 |
3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) E1695–E1704.
[Submitted Version]
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| PubMed | Europe PMC
C. Topp, A. Iyer Pascuzzi, J. Anderson, C. Lee, P. Zurek, O. Symonova, Y. Zheng, A. Bucksch, Y. Mileyko, T. Galkovskyi, B. Moore, J. Harer, H. Edelsbrunner, T. Mitchell Olds, J. Weitz, P. Benfey, PNAS 110 (2013) E1695–E1704.
2013 | Conference Paper | IST-REx-ID: 2906 |
3D kinetic alpha complexes and their implementation
M. Kerber, H. Edelsbrunner, in:, 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments, Society of Industrial and Applied Mathematics, 2013, pp. 70–77.
[Submitted Version]
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M. Kerber, H. Edelsbrunner, in:, 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments, Society of Industrial and Applied Mathematics, 2013, pp. 70–77.
2013 | Journal Article | IST-REx-ID: 6128 |
Cross-modulation of homeostatic responses to temperature, oxygen and carbon dioxide in C. elegans
E. Kodama-Namba, L.A. Fenk, A.J. Bretscher, E. Gross, K.E. Busch, M. de Bono, PLoS Genetics 9 (2013).
[Published Version]
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E. Kodama-Namba, L.A. Fenk, A.J. Bretscher, E. Gross, K.E. Busch, M. de Bono, PLoS Genetics 9 (2013).
2013 | Book Chapter | IST-REx-ID: 10900
Live Cell Imaging of Chemotactic Dendritic Cell Migration in Explanted Mouse Ear Preparations
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
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| PubMed | Europe PMC
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
2012 | Conference Paper | IST-REx-ID: 11795
On multiple keyword sponsored search auctions with budgets
R. Colini-Baldeschi, M.H. Henzinger, S. Leonardi, M. Starnberger, in:, 39th International Colloquium on Automata, Languages, and Programming, Springer Nature, 2012, pp. 1–12.
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| DOI
R. Colini-Baldeschi, M.H. Henzinger, S. Leonardi, M. Starnberger, in:, 39th International Colloquium on Automata, Languages, and Programming, Springer Nature, 2012, pp. 1–12.
2012 | Journal Article | IST-REx-ID: 2079
crdbrd: Shape fabrication by sliding planar slices
K. Hildebrand, B. Bickel, M. Alexa, Computer Graphics Forum 31 (2012) 583–592.
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K. Hildebrand, B. Bickel, M. Alexa, Computer Graphics Forum 31 (2012) 583–592.
2012 | Journal Article | IST-REx-ID: 2103
Coupled 3D reconstruction of sparse facial hair and skin
T. Beeler, B. Bickel, G. Noris, P. Beardsley, S. Marschner, R. Sumner, M. Groß, ACM Transactions on Graphics 31 (2012).
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T. Beeler, B. Bickel, G. Noris, P. Beardsley, S. Marschner, R. Sumner, M. Groß, ACM Transactions on Graphics 31 (2012).
2012 | Journal Article | IST-REx-ID: 2101
Fabricating articulated characters from skinned meshes
M. Bac̈Her, B. Bickel, D. James, H. Pfister, ACM Transactions on Graphics 31 (2012).
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M. Bac̈Her, B. Bickel, D. James, H. Pfister, ACM Transactions on Graphics 31 (2012).
2012 | Journal Article | IST-REx-ID: 2102
Physical face cloning
B. Bickel, P. Kaufmann, M. Skouras, B. Thomaszewski, D. Bradley, T. Beeler, P. Jackson, S. Marschner, W. Matusik, M. Groß, ACM Transactions on Graphics 31 (2012).
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B. Bickel, P. Kaufmann, M. Skouras, B. Thomaszewski, D. Bradley, T. Beeler, P. Jackson, S. Marschner, W. Matusik, M. Groß, ACM Transactions on Graphics 31 (2012).
2012 | Conference Paper | IST-REx-ID: 2106
Data-driven estimation of cloth simulation models
E. Miguel, D. Bradley, B. Thomaszewski, B. Bickel, W. Matusik, M. Otaduy, S. Marschner, in:, Wiley-Blackwell, 2012, pp. 519–528.
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E. Miguel, D. Bradley, B. Thomaszewski, B. Bickel, W. Matusik, M. Otaduy, S. Marschner, in:, Wiley-Blackwell, 2012, pp. 519–528.
2012 | Conference Paper | IST-REx-ID: 2268 |
Analytic anti-aliasing of linear functions on polytopes
T. Auzinger, M. Guthe, S. Jeschke, in:, Wiley-Blackwell, 2012, pp. 335–344.
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T. Auzinger, M. Guthe, S. Jeschke, in:, Wiley-Blackwell, 2012, pp. 335–344.
2012 | Journal Article | IST-REx-ID: 2514
Mechanisms underlying signal filtering at a multisynapse contact
T. Budisantoso, K. Matsui, N. Kamasawa, Y. Fukazawa, R. Shigemoto, Journal of Neuroscience 32 (2012) 2357–2376.
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T. Budisantoso, K. Matsui, N. Kamasawa, Y. Fukazawa, R. Shigemoto, Journal of Neuroscience 32 (2012) 2357–2376.
2012 | Journal Article | IST-REx-ID: 3248 |
Real-time detection of colored objects in multiple camera streams with off-the-shelf hardware components
C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
[Submitted Version]
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C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
2012 | Journal Article | IST-REx-ID: 3274
A 2.5D-Fourier-BEM model for vibrations in a tunnel running through layered anisotropic soil
G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
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G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
2012 | Journal Article | IST-REx-ID: 8466
Real-time NMR characterization of structure and dynamics in a transiently populated protein folding intermediate
E. Rennella, T. Cutuil, P. Schanda, I. Ayala, V. Forge, B. Brutscher, Journal of the American Chemical Society 134 (2012) 8066–8069.
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E. Rennella, T. Cutuil, P. Schanda, I. Ayala, V. Forge, B. Brutscher, Journal of the American Chemical Society 134 (2012) 8066–8069.
2011 | Journal Article | IST-REx-ID: 3505 |
In vitro analysis of chemotactic leukocyte migration in 3D environments
M.K. Sixt, T. Lämmermann, Cell Migration 769 (2011) 149–165.
[Published Version]
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M.K. Sixt, T. Lämmermann, Cell Migration 769 (2011) 149–165.
2011 | Book Chapter | IST-REx-ID: 3271
Efficient computation of persistent homology for cubical data
H. Wagner, C. Chen, E. Vuçini, in:, R. Peikert, H. Hauser, H. Carr, R. Fuchs (Eds.), Topological Methods in Data Analysis and Visualization II, Springer, 2011, pp. 91–106.
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| DOI
H. Wagner, C. Chen, E. Vuçini, in:, R. Peikert, H. Hauser, H. Carr, R. Fuchs (Eds.), Topological Methods in Data Analysis and Visualization II, Springer, 2011, pp. 91–106.
2011 | Conference Poster | IST-REx-ID: 3312 |
Detailed reconstruction of 3D plant root shape
Y. Zheng, S. Gu, H. Edelsbrunner, C. Tomasi, P. Benfey, Detailed Reconstruction of 3D Plant Root Shape, IEEE, 2011.
[Submitted Version]
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| Files available
| DOI
Y. Zheng, S. Gu, H. Edelsbrunner, C. Tomasi, P. Benfey, Detailed Reconstruction of 3D Plant Root Shape, IEEE, 2011.
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