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244 Publications


2022 | Conference Paper | IST-REx-ID: 12452 | OA
VoRF: Volumetric Relightable Faces
P. Rao, M. B R, G. Fox, T. Weyrich, B. Bickel, H.-P. Seidel, H. Pfister, W. Matusik, A. Tewari, C. Theobalt, M. Elgharib, in:, 33rd British Machine Vision Conference, British Machine Vision Association and Society for Pattern Recognition, 2022.
[Published Version] View | Files available | Download Published Version (ext.)
 

2022 | Journal Article | IST-REx-ID: 11478 | OA
A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation
K. Bartalska, V. Hübschmann, M. Korkut, R.J. Cubero, A. Venturino, K. Rössler, T. Czech, S. Siegert, IScience 25 (2022).
[Published Version] View | Files available | DOI | WoS
 

2022 | Thesis | IST-REx-ID: 12401 | OA
Role of microenvironment heterogeneity in cancer cell invasion
S. Tasciyan, Role of Microenvironment Heterogeneity in Cancer Cell Invasion, Institute of Science and Technology Austria, 2022.
[Published Version] View | Files available | DOI
 

2022 | Preprint | IST-REx-ID: 11943 | OA
Saturated reconstruction of living brain tissue
P. Velicky, E. Miguel Villalba, J.M. Michalska, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, BioRxiv (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2022 | Preprint | IST-REx-ID: 11950 | OA
Uncovering brain tissue architecture across scales with super-resolution light microscopy
J.M. Michalska, J. Lyudchik, P. Velicky, H. Korinkova, J. Watson, A. Cenameri, C.M. Sommer, A. Venturino, K. Roessler, T. Czech, S. Siegert, G. Novarino, P.M. Jonas, J.G. Danzl, BioRxiv (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2021 | Journal Article | IST-REx-ID: 11500 | OA
The MUSE Extremely Deep Field: The cosmic web in emission at high redshift
Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely Deep Field: The cosmic web in emission at high redshift. Astronomy & Astrophysics. 647, A107.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11525 | OA
Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations
S.G. Gallego, S. Cantalupo, S. Sarpas, B. Duboeuf, S. Lilly, G. Pezzulli, R.A. Marino, J.J. Matthee, L. Wisotzki, J. Schaye, J. Richard, H. Kusakabe, V. Mauerhofer, Monthly Notices of the Royal Astronomical Society 504 (2021) 16–32.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Conference Paper | IST-REx-ID: 9824
Body centered cubic grid - coordinate system and discrete analytical plane definition
L. Čomić, R. Zrour, G. Largeteau-Skapin, R. Biswas, E. Andres, in:, Discrete Geometry and Mathematical Morphology, Springer Nature, 2021, pp. 152–163.
View | DOI
 

2021 | Journal Article | IST-REx-ID: 8582 | OA
Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana
H. Li, D. von Wangenheim, X. Zhang, S. Tan, N. Darwish-Miranda, S. Naramoto, K.T. Wabnik, R. de Rycke, W. Kaufmann, D.J. Gütl, R. Tejos, P. Grones, M. Ke, X. Chen, J. Dettmer, J. Friml, New Phytologist 229 (2021) 351–369.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9244 | OA
DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome
S. Hankeova, J. Salplachta, T. Zikmund, M. Kavkova, N. Van Hul, A. Brinek, V. Smekalova, J. Laznovsky, F. Dawit, J. Jaros, V. Bryja, U. Lendahl, E. Ellis, A. Nemeth, B. Fischler, E.B. Hannezo, J. Kaiser, E.R. Andersson, ELife 10 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9241 | OA
Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing
O. Elek, R. Zhang, D. Sumin, K. Myszkowski, B. Bickel, A. Wilkie, J. Křivánek, T. Weyrich, Optics Express 29 (2021) 7568–7588.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9295 | OA
Drawings of complete graphs in the projective plane
A.M. Arroyo Guevara, D. Mcquillan, R.B. Richter, G. Salazar, M. Sullivan, Journal of Graph Theory 97 (2021) 426–440.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 9294 | OA
Engaging the front wheels to drive through fibrous terrain
F.R. Gärtner, M.K. Sixt, Developmental Cell 56 (2021) 723–725.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9376 | OA
Computational design of planar multistable compliant structures
R. Zhang, T. Auzinger, B. Bickel, ACM Transactions on Graphics 40 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9412 | OA
Fluctuation around the circular law for random matrices with real entries
G. Cipolloni, L. Erdös, D.J. Schröder, Electronic Journal of Probability 26 (2021).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 9629 | OA
Cell fate coordinates mechano-osmotic forces in intestinal crypt formation
Q. Yang, S. Xue, C.J. Chan, M. Rempfler, D. Vischi, F. Maurer-Gutierrez, T. Hiiragi, E.B. Hannezo, P. Liberali, Nature Cell Biology 23 (2021) 733–744.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9820 | OA
The effect of shape and illumination on material perception: Model and applications
A. Serrano, B. Chen, C. Wang, M. Piovarci, H.P. Seidel, P. Didyk, K. Myszkowski, ACM Transactions on Graphics 40 (2021).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2021 | Journal Article | IST-REx-ID: 9952 | OA
Three-dimensional geometry controls division symmetry in stem cell colonies
A. Chaigne, M.B. Smith, R.L. Cavestany, E.B. Hannezo, K.J. Chalut, E.K. Paluch, Journal of Cell Science 134 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9547 | OA
Neural acceleration of scattering-aware color 3D printing
T. Rittig, D. Sumin, V. Babaei, P. Didyk, A. Voloboy, A. Wilkie, B. Bickel, K. Myszkowski, T. Weyrich, J. Křivánek, Computer Graphics Forum 40 (2021) 205–219.
[Submitted Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 10178 | OA
Geometric signatures of tissue surface tension in a three-dimensional model of confluent tissue
P. Sahu, J.M. Schwarz, M.L. Manning, New Journal of Physics 23 (2021).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 10323 | OA
How do chaperones bind (partly) unfolded client proteins?
I. Sučec, B. Bersch, P. Schanda, Frontiers in Molecular Biosciences 8 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 10404 | OA
Interactive analysis of CNN robustness
S. Sietzen, M. Lechner, J. Borowski, R. Hasani, M. Waldner, Computer Graphics Forum 40 (2021) 253–264.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 10628 | OA
Shadow surface states in topological Kondo insulators
A. Ghazaryan, E.M. Nica, O. Erten, P. Ghaemi, New Journal of Physics 23 (2021).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 8429 | OA
Probabilistic inference of the genetic architecture underlying functional enrichment of complex traits
M. Patxot, D. Trejo Banos, A. Kousathanas, E.J. Orliac, S.E. Ojavee, G. Moser, J. Sidorenko, Z. Kutalik, R. Magi, P.M. Visscher, L. Ronnegard, M.R. Robinson, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Research Data Reference | IST-REx-ID: 13063 | OA [Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2020 | Journal Article | IST-REx-ID: 7708 | OA
Significant out-of-sample classification from methylation profile scoring for amyotrophic lateral sclerosis
Nabais MF, Lin T, Benyamin B, Williams KL, Garton FC, Vinkhuyzen AAE, Zhang F, Vallerga CL, Restuadi R, Freydenzon A, Zwamborn RAJ, Hop PJ, Robinson MR, Gratten J, Visscher PM, Hannon E, Mill J, Brown MA, Laing NG, Mather KA, Sachdev PS, Ngo ST, Steyn FJ, Wallace L, Henders AK, Needham M, Veldink JH, Mathers S, Nicholson G, Rowe DB, Henderson RD, McCombe PA, Pamphlett R, Yang J, Blair IP, McRae AF, Wray NR. 2020. Significant out-of-sample classification from methylation profile scoring for amyotrophic lateral sclerosis. npj Genomic Medicine. 5, 10.
[Published Version] View | DOI | Download Published Version (ext.)
 

2020 | Journal Article | IST-REx-ID: 7814 | OA
SCOPES: Sparking curiosity through Open-Source platforms in education and science
R.J. Beattie, S. Hippenmeyer, F. Pauler, Frontiers in Education 5 (2020).
[Published Version] View | Files available | DOI
 

2020 | Journal Article | IST-REx-ID: 9249 | OA
Digital objects in rhombic dodecahedron grid
R. Biswas, G. Largeteau-Skapin, R. Zrour, E. Andres, Mathematical Morphology - Theory and Applications 4 (2020) 143–158.
[Published Version] View | Files available | DOI
 

2020 | Journal Article | IST-REx-ID: 9208
A bending-active twisted-arch plywood structure: Computational design and fabrication of the FlexMaps Pavilion
F. Laccone, L. Malomo, J. Perez Rodriguez, N. Pietroni, F. Ponchio, B. Bickel, P. Cignoni, SN Applied Sciences 2 (2020).
View | DOI
 

2020 | Conference Paper | IST-REx-ID: 8188 | OA
Unsupervised object-centric video generation and decomposition in 3D
P.M. Henderson, C. Lampert, in:, 34th Conference on Neural Information Processing Systems, Curran Associates, 2020, pp. 3106–3117.
[Preprint] View | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 6952 | OA
Learning single-image 3D reconstruction by generative modelling of shape, pose and shading
P.M. Henderson, V. Ferrari, International Journal of Computer Vision 128 (2020) 835–854.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2020 | Journal Article | IST-REx-ID: 7218
Single-stage bone resection and cranioplastic reconstruction: Comparison of a novel software-derived PEEK workflow with the standard reconstructive method
P. Dodier, F. Winter, T. Auzinger, G. Mistelbauer, J.M. Frischer, W.T. Wang, A. Mallouhi, W. Marik, S. Wolfsberger, L. Reissig, F. Hammadi, C. Matula, A. Baumann, G. Bavinzski, International Journal of Oral and Maxillofacial Surgery 49 (2020) P1007-1015.
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2020 | Journal Article | IST-REx-ID: 8568 | OA
Persistent and reversible solid iodine electrodeposition in nanoporous carbons
C. Prehal, H. Fitzek, G. Kothleitner, V. Presser, B. Gollas, S.A. Freunberger, Q. Abbas, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8674 | OA
LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia
Henneberger C, Bard L, Panatier A, Reynolds JP, Kopach O, Medvedev NI, Minge D, Herde MK, Anders S, Kraev I, Heller JP, Rama S, Zheng K, Jensen TP, Sanchez-Romero I, Jackson CJ, Janovjak HL, Ottersen OP, Nagelhus EA, Oliet SHR, Stewart MG, Nägerl UVa, Rusakov DA. 2020. LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia. Neuron. 108(5), P919–936.E11.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 8707
CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction
S. Galan, N.N. Machnik, K. Kruse, N. Díaz, M.A. Marti-Renom, J.M. Vaquerizas, Nature Genetics 52 (2020) 1247–1255.
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2020 | Preprint | IST-REx-ID: 14096 | OA
Successful common envelope ejection and binary neutron star formation in 3D hydrodynamics
J.A.P.L.-S. Jamie A. P. Law-Smith, R.W. Everson, E.R.-R. Enrico Ramirez-Ruiz, S.E. de Mink, L.A.C. van Son, Y.L.L. Götberg, S. Zellmann, A.V.-G. Alejandro Vigna-Gómez, M. Renzo, S. Wu, S.L. Schrøder, R.J. Foley, T.H.-S. Tenley Hutchinson-Smith, ArXiv (n.d.).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 8130 | OA
Derivation of the 2d Gross–Pitaevskii equation for strongly confined 3d Bosons
L. Bossmann, Archive for Rational Mechanics and Analysis 238 (2020) 541–606.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2020 | Thesis | IST-REx-ID: 8386 | OA
Structure-aware computational design and its application to 3D printable volume scattering, mechanism, and multistability
R. Zhang, Structure-Aware Computational Design and Its Application to 3D Printable Volume Scattering, Mechanism, and Multistability, Institute of Science and Technology Austria, 2020.
[Published Version] View | Files available | DOI
 

2020 | Conference Paper | IST-REx-ID: 8186 | OA
Leveraging 2D data to learn textured 3D mesh generation
P.M. Henderson, V. Tsiminaki, C. Lampert, in:, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, IEEE, 2020, pp. 7498–7507.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | arXiv
 
 

2020 | Journal Article | IST-REx-ID: 7160
Anatomical specializations related to foraging in the visual system of a nocturnal insectivorous bird, the band-winged nightjar (Aves: Caprimulgiformes)
J.E. Salazar, D. Severin, T.A. Vega Zuniga, P. Fernández-Aburto, A. Deichler, M. Sallaberry A., J. Mpodozis, Brain, Behavior and Evolution 94 (2020) 27–36.
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2020 | Journal Article | IST-REx-ID: 8586 | OA
3D printed cell culture grid holders for improved cellular specimen preparation in cryo-electron microscopy
F. Fäßler, B. Zens, R. Hauschild, F.K. Schur, Journal of Structural Biology 212 (2020).
[Published Version] View | Files available | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 10354 | OA
Changes in ESCRT-III filament geometry drive membrane remodelling and fission in silico
L. Harker-Kirschneck, B. Baum, A. Šarić, BMC Biology 17 (2019).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 11059
Coaching from the sidelines: The nuclear periphery in genome regulation
A. Buchwalter, J.M. Kaneshiro, M. Hetzer, Nature Reviews Genetics 20 (2019) 39–50.
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2019 | Book Chapter | IST-REx-ID: 5793
Studying YAP-mediated 3D morphogenesis using fish embryos and human spheroids
Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
View | DOI
 

2019 | Conference Paper | IST-REx-ID: 6163
Rhombic dodecahedron grid—coordinate system and 3D digital object definitions
R. Biswas, G. Largeteau-Skapin, R. Zrour, E. Andres, in:, 21st IAPR International Conference on Discrete Geometry for Computer Imagery, Springer Berlin Heidelberg, Berlin, Heidelberg, 2019, pp. 27–37.
View | DOI
 

2019 | Journal Article | IST-REx-ID: 13471 | OA
Massive runaway and walkaway stars
M. Renzo, E. Zapartas, S.E. de Mink, Y.L.L. Götberg, S. Justham, R.J. Farmer, R.G. Izzard, S. Toonen, H. Sana, Astronomy & Astrophysics 624 (2019).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 6088
Inhibition of ABCB1 and ABCG2 at the mouse blood-brain barrier with marketed drugs to improve brain delivery of the model ABCB1/ABCG2 substrate [11C]erlotinib
A. Traxl, S. Mairinger, T. Filip, M. Sauberer, J. Stanek, S. Poschner, W. Jäger, V. Zoufal, G. Novarino, N. Tournier, M. Bauer, T. Wanek, O. Langer, Molecular Pharmaceutics 16 (2019) 1282–1293.
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2019 | Journal Article | IST-REx-ID: 6343 View | DOI | WoS
 

2019 | Journal Article | IST-REx-ID: 6513 | OA
Tracing the origin of adult intestinal stem cells
J. Guiu, E.B. Hannezo, S. Yui, S. Demharter, S. Ulyanchenko, M. Maimets, A. Jørgensen, S. Perlman, L. Lundvall, L.S. Mamsen, A. Larsen, R.H. Olesen, C.Y. Andersen, L.L. Thuesen, K.J. Hare, T.H. Pers, K. Khodosevich, B.D. Simons, K.B. Jensen, Nature 570 (2019) 107–111.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

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