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43 Publications


2024 | Journal Article | IST-REx-ID: 14834 | OA
Radler, Philipp, and Martin Loose. “A Dynamic Duo: Understanding the Roles of FtsZ and FtsA for Escherichia Coli Cell Division through in Vitro Approaches.” European Journal of Cell Biology. Elsevier, 2024. https://doi.org/10.1016/j.ejcb.2023.151380.
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2024 | Journal Article | IST-REx-ID: 15033 | OA
Adamowski, Maciek, Ivana Matijevic, and Jiří Friml. “Developmental Patterning Function of GNOM ARF-GEF Mediated from the Cell Periphery.” ELife. eLife Sciences Publications, 2024. https://doi.org/10.7554/elife.68993.
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2024 | Journal Article | IST-REx-ID: 15257 | OA
Kulich, Ivan, Julia Schmid, Anastasiia Teplova, Linlin Qi, and Jiří Friml. “Rapid Translocation of NGR Proteins Driving Polarization of PIN-Activating D6 Protein Kinase during Root Gravitropism.” ELife. eLife Sciences Publications, 2024. https://doi.org/10.7554/elife.91523.3.
[Published Version] View | Files available | DOI
 

2023 | Journal Article | IST-REx-ID: 12172
Khatoon, Bushra, Shoaib Kamil, Hitesh Babu, and M. Siraj Alam. “Experimental Analysis of Cascade CSTRs with Step and Pulse Inputs.” Materials Today: Proceedings. Elsevier, 2023. https://doi.org/10.1016/j.matpr.2022.11.037.
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2023 | Journal Article | IST-REx-ID: 14274 | OA
Alanko, Jonna H, Mehmet C Ucar, Nikola Canigova, Julian A Stopp, Jan Schwarz, Jack Merrin, Edouard B Hannezo, and Michael K Sixt. “CCR7 Acts as Both a Sensor and a Sink for CCL19 to Coordinate Collective Leukocyte Migration.” Science Immunology. American Association for the Advancement of Science, 2023. https://doi.org/10.1126/sciimmunol.adc9584.
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2023 | Journal Article | IST-REx-ID: 14776 | OA
Teplova, Anastasiia, Artemii A. Pigidanov, Marina V. Serebryakova, Sergei A. Golyshev, Raisa A. Galiullina, Nina V. Chichkova, and Andrey B. Vartapetian. “Phytaspase Is Capable of Detaching the Endoplasmic Reticulum Retrieval Signal from Tobacco Calreticulin-3.” International Journal of Molecular Sciences. MDPI, 2023. https://doi.org/10.3390/ijms242216527.
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2023 | Journal Article | IST-REx-ID: 14783 | OA
Cheung, Giselle T, Oana Chever, Astrid Rollenhagen, Nicole Quenech’du, Pascal Ezan, Joachim H. R. Lübke, and Nathalie Rouach. “Astroglial Connexin 43 Regulates Synaptic Vesicle Release at Hippocampal Synapses.” Cells. MDPI, 2023. https://doi.org/10.3390/cells12081133.
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2023 | Conference Paper | IST-REx-ID: 14830
Zikelic, Dorde, Mathias Lechner, Thomas A Henzinger, and Krishnendu Chatterjee. “Learning Control Policies for Stochastic Systems with Reach-Avoid Guarantees.” In Proceedings of the 37th AAAI Conference on Artificial Intelligence, 37:11926–35. Association for the Advancement of Artificial Intelligence, 2023. https://doi.org/10.1609/aaai.v37i10.26407.
[Preprint] View | Files available | DOI | arXiv
 

2023 | Journal Article | IST-REx-ID: 14835 | OA
Becker, Lea Marie, Mélanie Berbon, Alicia Vallet, Axelle Grelard, Estelle Morvan, Benjamin Bardiaux, Roman Lichtenecker, Matthias Ernst, Antoine Loquet, and Paul Schanda. “Der starre Kern und die flexible Oberfläche von Amyloidfibrillen – Magic‐Angle‐Spinning NMR Spektroskopie von aromatischen Resten.” Angewandte Chemie. Wiley, 2023. https://doi.org/10.1002/ange.202219314.
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2023 | Journal Article | IST-REx-ID: 14854
Mitrouskas, David Johannes, and Robert Seiringer. “Ubiquity of Bound States for the Strongly Coupled Polaron.” Pure and Applied Analysis. Mathematical Sciences Publishers, 2023. https://doi.org/10.2140/paa.2023.5.973.
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2022 | Journal Article | IST-REx-ID: 11713 | OA
Nikolic, Nela, Martina Sauert, Tanino G. Albanese, and Isabella Moll. “Quantifying Heterologous Gene Expression during Ectopic MazF Production in Escherichia Coli.” BMC Research Notes. Springer Nature, 2022. https://doi.org/10.1186/s13104-022-06061-9.
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2022 | Journal Article | IST-REx-ID: 12276 | OA
Ljubotina, Marko, Barbara Roos, Dmitry A. Abanin, and Maksym Serbyn. “Optimal Steering of Matrix Product States and Quantum Many-Body Scars.” PRX Quantum. American Physical Society, 2022. https://doi.org/10.1103/prxquantum.3.030343.
[Published Version] View | Files available | DOI | arXiv
 

2022 | Journal Article | IST-REx-ID: 11448 | OA
Gonzalez Somermeyer, Louisa, Aubin Fleiss, Alexander S Mishin, Nina G Bozhanova, Anna A Igolkina, Jens Meiler, Maria-Elisenda Alaball Pujol, Ekaterina V Putintseva, Karen S Sarkisyan, and Fyodor Kondrashov. “Heterogeneity of the GFP Fitness Landscape and Data-Driven Protein Design.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/elife.75842.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12157 | OA
Hayward, Laura, and Guy Sella. “Polygenic Adaptation after a Sudden Change in Environment.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/elife.66697.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12235 | OA
Patxot, Marion, Miloš Stojanov, Sven Erik Ojavee, Rosanna Pescini Gobert, Zoltán Kutalik, Mathilde Gavillet, David Baud, and Matthew Richard Robinson. “Haematological Changes from Conception to Childbirth: An Indicator of Major Pregnancy Complications.” European Journal of Haematology. Wiley, 2022. https://doi.org/10.1111/ejh.13844.
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2022 | Journal Article | IST-REx-ID: 12288 | OA
Sumser, Anton L, Maximilian A Jösch, Peter M Jonas, and Yoav Ben Simon. “Fast, High-Throughput Production of Improved Rabies Viral Vectors for Specific, Efficient and Versatile Transsynaptic Retrograde Labeling.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/elife.79848.
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2022 | Journal Article | IST-REx-ID: 13993 | OA
Gong, Xiaochun, Inga Jordan, Martin Huppert, Saijoscha Heck, Denitsa Rangelova Baykusheva, Denis Jelovina, Axel Schild, and Hans Jakob Wörner. “Attosecond Photoionization Dynamics: From Molecules over Clusters to the Liquid Phase.” Chimia. Swiss Chemical Society, 2022. https://doi.org/10.2533/chimia.2022.520.
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2022 | Journal Article | IST-REx-ID: 12510 | OA
Gruenbacher, Sophie A., Mathias Lechner, Ramin Hasani, Daniela Rus, Thomas A Henzinger, Scott A. Smolka, and Radu Grosu. “GoTube: Scalable Statistical Verification of Continuous-Depth Models.” Proceedings of the AAAI Conference on Artificial Intelligence. Association for the Advancement of Artificial Intelligence, 2022. https://doi.org/10.1609/aaai.v36i6.20631.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 12511 | OA
Lechner, Mathias, Dorde Zikelic, Krishnendu Chatterjee, and Thomas A Henzinger. “Stability Verification in Stochastic Control Systems via Neural Network Supermartingales.” Proceedings of the AAAI Conference on Artificial Intelligence. Association for the Advancement of Artificial Intelligence, 2022. https://doi.org/10.1609/aaai.v36i7.20695.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11471 | OA
Sack, Stefan, Raimel A Medina Ramos, Alexios Michailidis, Richard Kueng, and Maksym Serbyn. “Avoiding Barren Plateaus Using Classical Shadows.” PRX Quantum. American Physical Society, 2022. https://doi.org/10.1103/prxquantum.3.020365.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2021 | Journal Article | IST-REx-ID: 10806 | OA
Calcabrini, Mariano, Dietger Van den Eynden, Sergi Sanchez Ribot, Rohan Pokratath, Jordi Llorca, Jonathan De Roo, and Maria Ibáñez. “Ligand Conversion in Nanocrystal Synthesis: The Oxidation of Alkylamines to Fatty Acids by Nitrate.” JACS Au. American Chemical Society, 2021. https://doi.org/10.1021/jacsau.1c00349.
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2021 | Journal Article | IST-REx-ID: 9387 | OA
Khudiakova, Kseniia, Tatiana Yu. Neretina, and Alexey S. Kondrashov. “Two Linked Loci under Mutation-Selection Balance and Muller’s Ratchet.” Journal of Theoretical Biology. Elsevier , 2021. https://doi.org/10.1016/j.jtbi.2021.110729.
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2021 | Journal Article | IST-REx-ID: 10301 | OA
Conde-Dusman, María J, Partha N Dey, Óscar Elía-Zudaire, Luis E Garcia Rabaneda, Carmen García-Lira, Teddy Grand, Victor Briz, et al. “Control of Protein Synthesis and Memory by GluN3A-NMDA Receptors through Inhibition of GIT1/MTORC1 Assembly.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.71575.
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2021 | Journal Article | IST-REx-ID: 15278 | OA
Cordella, Federica, Caterina Sanchini, Maria Rosito, Laura Ferrucci, Natalia Pediconi, Barbara Cortese, Francesca Guerrieri, et al. “Antibiotics Treatment Modulates Microglia–Synapses Interaction.” Cells. MDPI, 2021. https://doi.org/10.3390/cells10102648.
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2021 | Journal Article | IST-REx-ID: 15285 | OA
Rubel, Paul, Jocelyne Fayn, Peter W. Macfarlane, Danilo Pani, Alois Schlögl, and Alpo Värri. “The History and Challenges of SCP-ECG: The Standard Communication Protocol for Computer-Assisted Electrocardiography.” Hearts. MDPI, 2021. https://doi.org/10.3390/hearts2030031.
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2021 | Journal Article | IST-REx-ID: 15273 | OA
Balmer, Timothy S, Carolina Borges Merjane, and Laurence O Trussell. “Incomplete Removal of Extracellular Glutamate Controls Synaptic Transmission and Integration at a Cerebellar Synapse.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.63819.
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2021 | Journal Article | IST-REx-ID: 10816 | OA
Guzmán, José, Alois Schlögl, Claudia Espinoza Martinez, Xiaomin Zhang, Benjamin Suter, and Peter M Jonas. “How Connectivity Rules and Synaptic Properties Shape the Efficacy of Pattern Separation in the Entorhinal Cortex–Dentate Gyrus–CA3 Network.” Nature Computational Science. Springer Nature, 2021. https://doi.org/10.1038/s43588-021-00157-1.
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2021 | Journal Article | IST-REx-ID: 8931 | OA
Gelová, Zuzana, Michelle C Gallei, Markéta Pernisová, Géraldine Brunoud, Xixi Zhang, Matous Glanc, Lanxin Li, et al. “Developmental Roles of Auxin Binding Protein 1 in Arabidopsis Thaliana.” Plant Science. Elsevier, 2021. https://doi.org/10.1016/j.plantsci.2020.110750.
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2020 | Journal Article | IST-REx-ID: 11055 | OA
Bersini, Simone, Roberta Schulte, Ling Huang, Hannah Tsai, and Martin Hetzer. “Direct Reprogramming of Human Smooth Muscle and Vascular Endothelial Cells Reveals Defects Associated with Aging and Hutchinson-Gilford Progeria Syndrome.” ELife. eLife Sciences Publications, 2020. https://doi.org/10.7554/elife.54383.
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2020 | Journal Article | IST-REx-ID: 13361 | OA
Grommet, Angela B., Lucia M. Lee, and Rafal Klajn. “Molecular Photoswitching in Confined Spaces.” Accounts of Chemical Research. American Chemical Society, 2020. https://doi.org/10.1021/acs.accounts.0c00434.
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2020 | Journal Article | IST-REx-ID: 15055 | OA
Brázdil, Tomáš, Krishnendu Chatterjee, Petr Novotný, and Jiří Vahala. “Reinforcement Learning of Risk-Constrained Policies in Markov Decision Processes.” Proceedings of the 34th AAAI Conference on Artificial Intelligence. Association for the Advancement of Artificial Intelligence, 2020. https://doi.org/10.1609/aaai.v34i06.6531.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 15063 | OA
Cipolloni, Giorgio, László Erdös, and Dominik J Schröder. “Optimal Lower Bound on the Least Singular Value of the Shifted Ginibre Ensemble.” Probability and Mathematical Physics. Mathematical Sciences Publishers, 2020. https://doi.org/10.2140/pmp.2020.1.101.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 15153 | OA
Fribourgh, Jennifer L, Ashutosh Srivastava, Colby R Sandate, Alicia K. Michael, Peter L Hsu, Christin Rakers, Leslee T Nguyen, et al. “Dynamics at the Serine Loop Underlie Differential Affinity of Cryptochromes for CLOCK:BMAL1 to Control Circadian Timing.” ELife. eLife Sciences Publications, 2020. https://doi.org/10.7554/elife.55275.
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2019 | Journal Article | IST-REx-ID: 12192 | OA
He, Shengbo, Martin Vickers, Jingyi Zhang, and Xiaoqi Feng. “Natural Depletion of Histone H1 in Sex Cells Causes DNA Demethylation, Heterochromatin Decondensation and Transposon Activation.” ELife. eLife Sciences Publications, Ltd, 2019. https://doi.org/10.7554/elife.42530.
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2019 | Journal Article | IST-REx-ID: 11060 | OA
Buchwalter, Abigail, Roberta Schulte, Hsiao Tsai, Juliana Capitanio, and Martin Hetzer. “Selective Clearance of the Inner Nuclear Membrane Protein Emerin by Vesicular Transport during ER Stress.” ELife. eLife Sciences Publications, 2019. https://doi.org/10.7554/elife.49796.
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2018 | Journal Article | IST-REx-ID: 8439
Laguri, Cedric, Alba Silipo, Alessandra M. Martorana, Paul Schanda, Roberta Marchetti, Alessandra Polissi, Antonio Molinaro, and Jean-Pierre Simorre. “Solid State NMR Studies of Intact Lipopolysaccharide Endotoxin.” ACS Chemical Biology. American Chemical Society, 2018. https://doi.org/10.1021/acschembio.8b00271.
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2018 | Journal Article | IST-REx-ID: 10880 | OA
Yuuta, Moriyama, and Kazuko Koshiba-Takeuchi. “Significance of Whole-Genome Duplications on the Emergence of Evolutionary Novelties.” Briefings in Functional Genomics. Oxford University Press, 2018. https://doi.org/10.1093/bfgp/ely007.
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2017 | Journal Article | IST-REx-ID: 10370 | OA
Helle, Sebastian Carsten Johannes, Qian Feng, Mathias J Aebersold, Luca Hirt, Raphael R Grüter, Afshin Vahid, Andrea Sirianni, et al. “Mechanical Force Induces Mitochondrial Fission.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/elife.30292.
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2017 | Journal Article | IST-REx-ID: 15158 | OA
Michael, Alicia K., Jennifer L. Fribourgh, Russell N. Van Gelder, and Carrie L. Partch. “Animal Cryptochromes: Divergent Roles in Light Perception, Circadian Timekeeping and Beyond.” Photochemistry and Photobiology. Wiley, 2017. https://doi.org/10.1111/php.12677.
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2017 | Journal Article | IST-REx-ID: 15154 | OA
Fong, Jiunn CN, Andrew Rogers, Alicia K. Michael, Nicole C Parsley, William-Cole Cornell, Yu-Cheng Lin, Praveen K Singh, et al. “Structural Dynamics of RbmA Governs Plasticity of Vibrio Cholerae Biofilms.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/elife.26163.
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2015 | Journal Article | IST-REx-ID: 12196
Johnson, Kaeli C.M., Shitou Xia, Xiaoqi Feng, and Xin Li. “The Chromatin Remodeler SPLAYED Negatively Regulates SNC1-Mediated Immunity.” Plant and Cell Physiology. Oxford University Press, 2015. https://doi.org/10.1093/pcp/pcv087.
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2014 | Journal Article | IST-REx-ID: 10815 | OA
Hashimoto, Masakazu, Hitoshi Morita, and Naoto Ueno. “Molecular and Cellular Mechanisms of Development Underlying Congenital Diseases.” Congenital Anomalies. Wiley, 2014. https://doi.org/10.1111/cga.12039.
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2014 | Journal Article | IST-REx-ID: 10814
Seiringer, Robert. “The Excitation Spectrum for Bose Fluids with Weak Interactions.” Jahresbericht Der Deutschen Mathematiker-Vereinigung. Springer Nature, 2014. https://doi.org/10.1365/s13291-014-0083-9.
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