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9087 Publications


2013 | Journal Article | IST-REx-ID: 2822 | OA
Topp C, Iyer Pascuzzi A, Anderson J, Lee C, Zurek P, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore B, Harer J, Edelsbrunner H, Mitchell Olds T, Weitz J, Benfey P. 2013. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. PNAS. 110(18), E1695–E1704.
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2013 | Journal Article | IST-REx-ID: 2821 | OA
Remy E, Cabrito T, Baster P, Batista R, Teixeira M, Friml J, Sá Correia I, Duque P. 2013. A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis. Plant Cell. 25(3), 901–926.
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2013 | Journal Article | IST-REx-ID: 2827 | OA
Du Y, Tejos R, Beck M, Himschoot E, Li H, Robatzek S, Vanneste S, Friml J. 2013. Salicylic acid interferes with clathrin-mediated endocytic protein trafficking. PNAS. 110(19), 7946–7951.
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2013 | Journal Article | IST-REx-ID: 2823
Pickup M, Wilson S, Freudenberger D, Nicholls N, Gould L, Hnatiuk S, Delandre J. 2013. Post-fire recovery of revegetated woodland communities in south-eastern Australia. Austral Ecology. 38(3), 300–312.
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2013 | Journal Article | IST-REx-ID: 2824
Chatterjee K, Prabhu V. 2013. Synthesis of memory-efficient, clock-memory free, and non-Zeno safety controllers for timed systems. Information and Computation. 228–229, 83–119.
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2013 | Journal Article | IST-REx-ID: 2832 | OA
Tanaka H, Kitakura S, Rakusová H, Uemura T, Feraru M, De Rycke R, Robert S, Kakimoto T, Friml J. 2013. Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana. PLoS Genetics. 9(5), e1003540.
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2013 | Journal Article | IST-REx-ID: 2828 | OA
Kolmogorov V, Živný S. 2013. The complexity of conservative valued CSPs. Journal of the ACM. 60(2), 10.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2829 | OA
Shi L, Avila M, Hof B. 2013. Scale invariance at the onset of turbulence in couette flow. Physical Review Letters. 110(20), 204502.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2834 | OA
Avila M, Mellibovsky F, Roland N, Hof B. 2013. Streamwise-localized solutions at the onset of turbulence in pipe flow. Physical Review Letters. 110(22), 224502.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2833
Heisenberg C-PJ, Bellaïche Y. 2013. Forces in tissue morphogenesis and patterning. Cell. 153(5), 948–962.
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2013 | Journal Article | IST-REx-ID: 2830
Moussion C, Sixt MK. 2013. A conduit to amplify innate immunity. Immunity. 38(5), 853–854.
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2013 | Journal Article | IST-REx-ID: 2842 | OA
Barton NH, Etheridge A, Kelleher J, Véber A. 2013. Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. Theoretical Population Biology. 87(1), 105–119.
[Submitted Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2838 | OA
Arquè Fuste G, Casanovas A, Dierssen M. 2013. Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome. PLoS One. 8(1), e54285.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2839 | OA
Weber M, Hauschild R, Schwarz J, Moussion C, de Vries I, Legler D, Luther S, Bollenbach MT, Sixt MK. 2013. Interstitial dendritic cell guidance by haptotactic chemokine gradients. Science. 339(6117), 328–332.
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2013 | Journal Article | IST-REx-ID: 2837 | OA
Erdös L, Knowles A, Yau H, Yin J. 2013. The local semicircle law for a general class of random matrices. Electronic Journal of Probability. 18(59), 1–58.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2835 | OA
Yu H, Karampelias M, Robert S, Peer W, Swarup R, Ye S, Ge L, Cohen J, Murphy A, Friml J, Estelle M. 2013. Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis. Plant Physiology. 162(2), 965–976.
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2013 | Journal Article | IST-REx-ID: 2836 | OA
Chatterjee K, Raman V. 2013. Assume-guarantee synthesis for digital contract signing. Formal Aspects of Computing. 26(4), 825–859.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2840
Van Cauter T, Camon J, Alvernhe A, Elduayen C, Sargolini F, Save É. 2013. Distinct roles of medial and lateral entorhinal cortex in spatial cognition. Cerebral Cortex. 23(2), 451–459.
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2013 | Journal Article | IST-REx-ID: 2841
Morita H, Heisenberg C-PJ. 2013. Holding on and letting go: Cadherin turnover in cell intercalation. Developmental Cell. 24(6), 567–569.
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2013 | Journal Article | IST-REx-ID: 2846 | OA
El Masri L, Schulte R, Timmermeyer N, Thanisch S, Crummenerl L, Jansen G, Michiels N, Schulenburg H. 2013. Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution. Ecology Letters. 16(4), 461–468.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2844
Rosquete M, von Wangenheim D, Marhavý P, Barbez E, Stelzer E, Benková E, Maizel A, Kleine Vehn J. 2013. An auxin transport mechanism restricts positive orthogravitropism in lateral roots. Current Biology. 23(9), 817–822.
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2013 | Conference Paper | IST-REx-ID: 2843
Edelsbrunner H, Pausinger F. 2013. Stable length estimates of tube-like shapes. 17th IAPR International Conference on Discrete Geometry for Computer Imagery. DGCI: Discrete Geometry for Computer Imagery, LNCS, vol. 7749, XV–XIX.
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2013 | Journal Article | IST-REx-ID: 2845
Rose T, Schönenberger P, Jezek K, Oertner T. 2013. Developmental refinement of vesicle cycling at Schaffer collateral synapses. Neuron. 77(6), 1109–1121.
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2013 | Journal Article | IST-REx-ID: 2854 | OA
Chatterjee K, De Alfaro L, Henzinger TA. 2013. Strategy improvement for concurrent reachability and turn based stochastic safety games. Journal of Computer and System Sciences. 79(5), 640–657.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2850 | OA
Tkačik G, Marre O, Mora T, Amodei D, Berry M, Bialek W. 2013. The simplest maximum entropy model for collective behavior in a neural network. Journal of Statistical Mechanics Theory and Experiment. 2013(3), P03011.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2851
Berry M, Tkačik G, Dubuis J, Marre O, Da Silveira R. 2013. A simple method for estimating the entropy of neural activity. Journal of Statistical Mechanics Theory and Experiment. 2013(3), P03015.
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2013 | Journal Article | IST-REx-ID: 2857 | OA
Szobota S, Mckenzie C, Janovjak HL. 2013. Optical control of ligand-gated ion channels. Methods in Molecular Biology. 998, 417–435.
[Submitted Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2860 | OA
Dupret D, O’Neill J, Csicsvari JL. 2013. Dynamic reconfiguration of hippocampal interneuron circuits during spatial learning. Neuron. 78(1), 166–180.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2855 | OA
Hippenmeyer S, Johnson R, Luo L. 2013. Mosaic analysis with double markers reveals cell type specific paternal growth dominance. Cell Reports. 3(3), 960–967.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2856 | OA
Levitz J, Pantoja C, Gaub B, Janovjak HL, Reiner A, Hoagland A, Schoppik D, Kane B, Stawski P, Schier A, Trauner D, Isacoff E. 2013. Optical control of metabotropic glutamate receptors. Nature Neuroscience. 16, 507–516.
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2013 | Journal Article | IST-REx-ID: 2859 | OA
Bendich P, Edelsbrunner H, Morozov D, Patel A. 2013. Homology and robustness of level and interlevel sets. Homology, Homotopy and Applications. 15(1), 51–72.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2863 | OA
Granot Atedgi E, Tkačik G, Segev R, Schneidman E. 2013. Stimulus-dependent maximum entropy models of neural population codes. PLoS Computational Biology. 9(3), e1002922.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2862 | OA
Tay H, Schulze S, Compagnon J, Foley F, Heisenberg C-PJ, Yost HJ, Abdelilah Seyfried S, Amack J. 2013. Lethal giant larvae 2 regulates development of the ciliated organ Kupffer’s vesicle. Development. 140(7), 1550–1559.
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2013 | Journal Article | IST-REx-ID: 2861
Botella Soler V, Oteo J, Ros J, Glendinning P. 2013. Lyapunov exponent and topological entropy plateaus in piecewise linear maps. Journal of Physics A: Mathematical and Theoretical. 46(12), 125101.
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2013 | Journal Article | IST-REx-ID: 2877
Vandenbussche F, Callebert P, Žádníková P, Benková E, Van Der Straeten D. 2013. Brassinosteroid control of shoot gravitropism interacts with ethylene and depends on auxin signaling components. American Journal of Botany. 100(1), 215–225.
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2013 | Journal Article | IST-REx-ID: 2883 | OA
Wang B, Bailly A, Zwiewk M, Henrichs S, Azzarello E, Mancuso S, Maeshima M, Friml J, Schulz A, Geisler M. 2013. Arabidopsis TWISTED DWARF1 functionally interacts with auxin exporter ABCB1 on the root plasma membrane. Plant Cell. 25(1), 202–214.
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2013 | Journal Article | IST-REx-ID: 2880 | OA
Marhavý P, Vanstraelen M, De Rybel B, Zhaojun D, Bennett M, Beeckman T, Benková E. 2013. Auxin reflux between the endodermis and pericycle promotes lateral root initiation. EMBO Journal. 32(1), 149–158.
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2013 | Journal Article | IST-REx-ID: 2882 | OA
Löfke C, Zwiewka M, Heilmann I, Van Montagu M, Teichmann T, Friml J. 2013. Asymmetric gibberellin signaling regulates vacuolar trafficking of PIN auxin transporters during root gravitropism. PNAS. 110(9), 3627–3632.
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2013 | Conference (Editor) | IST-REx-ID: 2885
Kucera A, Henzinger TA, Nesetril J, Vojnar T, Antos D eds. 2013. Mathematical and Engineering Methods in Computer Science, Springer,p.
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2013 | Journal Article | IST-REx-ID: 2881 | OA
Li H, Xu T, Lin D, Wen M, Xie M, Duclercq J, Bielach A, Kim J, Reddy GV, Zuo J, Benková E, Friml J, Guo H, Yang Z. 2013. Cytokinin signaling regulates pavement cell morphogenesis in Arabidopsis. Cell Research. 23(2), 290–299.
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2013 | Journal Article | IST-REx-ID: 2884
Maître J-L, Berthoumieux H, Krens G, Salbreux G, Julicher F, Paluch E, Heisenberg C-PJ. 2013. Cell adhesion mechanics of zebrafish gastrulation. Medecine Sciences. 29(2), 147–150.
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2013 | Conference Paper | IST-REx-ID: 2886 | OA
Chmelik M, Řehák V. 2013. Controllable-choice message sequence graphs. 7721, 118–130.
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2013 | Journal Article | IST-REx-ID: 2887 | OA
Fang S, Clark R, Zheng Y, Iyer Pascuzzi A, Weitz J, Kochian L, Edelsbrunner H, Liao H, Benfey P. 2013. Genotypic recognition and spatial responses by rice roots. PNAS. 110(7), 2670–2675.
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2013 | Conference Paper | IST-REx-ID: 2901 | OA
Chen C, Kolmogorov V, Yan Z, Metaxas D, Lampert C. 2013. Computing the M most probable modes of a graphical model. AISTATS: Conference on Uncertainty in Artificial Intelligence, JMLR: W&CP, vol. 31, 161–169.
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2013 | Journal Article | IST-REx-ID: 2900
Azevedo R, Lohaus R, Paixao T. 2013. Networking networks. Evolution & Development. 10(5), 514–515.
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2013 | Conference Paper | IST-REx-ID: 2906 | OA
Kerber M, Edelsbrunner H. 2013. 3D kinetic alpha complexes and their implementation. 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments. ALENEX: Algorithm Engineering and Experiments, ALENEX, , 70–77.
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2013 | Journal Article | IST-REx-ID: 2910 | OA
Kelleher J, Barton NH, Etheridge A. 2013. Coalescent simulation in continuous space. Bioinformatics. 29(7), 955–956.
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2013 | Journal Article | IST-REx-ID: 2909 | OA
Barton NH, Etheridge A, Véber A. 2013. Modelling evolution in a spatial continuum. Journal of Statistical Mechanics Theory and Experiment. 2013(1).
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2013 | Journal Article | IST-REx-ID: 2908 | OA
Barton NH. 2013. Does hybridisation influence speciation?  . Journal of Evolutionary Biology. 26(2), 267–269.
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2013 | Book Chapter | IST-REx-ID: 2907 | OA
Barton NH. 2013.Recombination and sex. In: The Princeton Guide to Evolution. , 328–333.
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