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9096 Publications
2009 | Journal Article | IST-REx-ID: 4149
The role of the extracellular matrix in Kupffer's vesicle formation in zebrafish
G. Soete, C.-P.J. Heisenberg, Mechanisms of Development 126 (2009) S168–S168.
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| DOI
G. Soete, C.-P.J. Heisenberg, Mechanisms of Development 126 (2009) S168–S168.
2009 | Journal Article | IST-REx-ID: 4165
Quantitative approaches in developmental biology
A. Oates, N. Gorfinkiel, M. Gonzalez Gaitan, C.-P.J. Heisenberg, Nature Reviews Genetics 10 (2009) 517–530.
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| DOI
A. Oates, N. Gorfinkiel, M. Gonzalez Gaitan, C.-P.J. Heisenberg, Nature Reviews Genetics 10 (2009) 517–530.
2009 | Journal Article | IST-REx-ID: 4192
Regulation of planar cell polarity signalling by the prenylation pathway
M. Kai, N. Buchan, C.-P.J. Heisenberg, M. Tada, Mechanisms of Development 126 (2009) S132–S132.
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M. Kai, N. Buchan, C.-P.J. Heisenberg, M. Tada, Mechanisms of Development 126 (2009) S132–S132.
2009 | Journal Article | IST-REx-ID: 4223
Discovery of a Small Molecule that Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus aureus
J. Swoboda, T. Meredith, J. Campbell, S. Brown, T. Suzuki, M.T. Bollenbach, A. Malhowski, R. Kishony, M. Gilmore, S. Walker, ACS Chemical Biology 4 (2009) 875–883.
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J. Swoboda, T. Meredith, J. Campbell, S. Brown, T. Suzuki, M.T. Bollenbach, A. Malhowski, R. Kishony, M. Gilmore, S. Walker, ACS Chemical Biology 4 (2009) 875–883.
2009 | Journal Article | IST-REx-ID: 4228
Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions
T. Bollenbach, S. Quan, R.P. Chait, R. Kishony, Cell 139 (2009) 707–718.
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| DOI
T. Bollenbach, S. Quan, R.P. Chait, R. Kishony, Cell 139 (2009) 707–718.
2009 | Journal Article | IST-REx-ID: 4242 | 
The evolution of strong reproductive isolation
N.H. Barton, M. De Cara, Evolution; International Journal of Organic Evolution 63 (2009) 1171–1190.
[Submitted Version]
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N.H. Barton, M. De Cara, Evolution; International Journal of Organic Evolution 63 (2009) 1171–1190.
2009 | Conference Paper | IST-REx-ID: 4365
Abstraction Refinement for Quantified Array Assertions
M. Seghir, A. Podelski, T. Wies, in:, Springer, 2009, pp. 3–18.
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M. Seghir, A. Podelski, T. Wies, in:, Springer, 2009, pp. 3–18.
2009 | Journal Article | IST-REx-ID: 3047
ABCB19 PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis
B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
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B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
2009 | Journal Article | IST-REx-ID: 3049
Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux
M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
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M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
2009 | Journal Article | IST-REx-ID: 3050
Cytokinin regulates root meristem activity via modulation of the polar auxin transport
K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
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K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
2009 | Journal Article | IST-REx-ID: 3048
Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
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H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
2009 | Journal Article | IST-REx-ID: 3054
Auxin and other signals on the move in plants
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
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| DOI
| PubMed | Europe PMC
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
2009 | Journal Article | IST-REx-ID: 3052 |
Auxin: A trigger for change in plant development
S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
[Published Version]
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| PubMed | Europe PMC
S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
2009 | Journal Article | IST-REx-ID: 3051 |
SnapShot: Auxin signaling and transport
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
[Published Version]
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| PubMed | Europe PMC
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
2009 | Journal Article | IST-REx-ID: 3053
A morphogenetic trigger: Is there an emerging concept in plant developmental biology?
E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
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E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
2009 | Journal Article | IST-REx-ID: 3197 |
An analysis of convex relaxations for MAP estimation of discrete MRFs
M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
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M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
2009 | Conference Paper | IST-REx-ID: 3199
Joint optimization of segmentation and appearance models
S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
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S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
2009 | Journal Article | IST-REx-ID: 3200
New algorithms for convex cost tension problem with application to computer vision
V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
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| DOI
V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
2009 | Journal Article | IST-REx-ID: 3292
A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus
J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
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J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
2009 | Journal Article | IST-REx-ID: 3293
Sensory correlates of imaginal conditioning in Drosophila melanogaster
S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
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| DOI
S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
2009 | Journal Article | IST-REx-ID: 3309
Mastitis in dairy production: Estimation of sensitivity, specificity and disease prevalence in the absence of a gold standard
C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
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C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
2009 | Thesis | IST-REx-ID: 3400
Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus
P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
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P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
2009 | Journal Article | IST-REx-ID: 3398
Quiet gene circuit more fragile than its noisy peer
M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
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M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
2009 | Journal Article | IST-REx-ID: 3547
Activity-dependent control of neuronal output by local and global dendritic spike attenuation
S. Remy, J.L. Csicsvari, H. Beck, Neuron 61 (2009) 906–916.
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S. Remy, J.L. Csicsvari, H. Beck, Neuron 61 (2009) 906–916.
2009 | Book Chapter | IST-REx-ID: 3578
Stability and computation of medial axes: a state-of-the-art report
D. Attali, J. Boissonnat, H. Edelsbrunner, in:, Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer, 2009, pp. 109–125.
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D. Attali, J. Boissonnat, H. Edelsbrunner, in:, Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer, 2009, pp. 109–125.
2009 | Book Chapter | IST-REx-ID: 3675
Why sex and recombination?
N.H. Barton, in:, Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
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N.H. Barton, in:, Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
2009 | Journal Article | IST-REx-ID: 3696
Structured prediction by joint kernel support estimation
C. Lampert, M. Blaschko, Machine Learning 77 (2009) 249–269.
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C. Lampert, M. Blaschko, Machine Learning 77 (2009) 249–269.
2009 | Conference Paper | IST-REx-ID: 3690
Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
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P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
2009 | Journal Article | IST-REx-ID: 3710
Efficient subwindow search: A branch and bound framework for object localization
C. Lampert, M. Blaschko, T. Hofmann, IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (2009) 2129–2142.
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C. Lampert, M. Blaschko, T. Hofmann, IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (2009) 2129–2142.
2009 | Conference Paper | IST-REx-ID: 3711
Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
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P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
2009 | Book | IST-REx-ID: 3707
Kernel Methods in Computer Vision
C. Lampert, Kernel Methods in Computer Vision, now publishers, 2009.
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| DOI
C. Lampert, Kernel Methods in Computer Vision, now publishers, 2009.
2009 | Conference Paper | IST-REx-ID: 3708
Global connectivity potentials for random field models
S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 818–825.
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| DOI
S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 818–825.
2009 | Conference Paper | IST-REx-ID: 3709
Detecting objects in large image collections and videos by efficient subimage retrieval
C. Lampert, in:, IEEE, 2009, pp. 987–994.
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| DOI
C. Lampert, in:, IEEE, 2009, pp. 987–994.
2009 | Journal Article | IST-REx-ID: 3745
Diffusion, dimensionality, and noise in transcriptional regulation
G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 79 (2009).
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G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 79 (2009).
2009 | Journal Article | IST-REx-ID: 3775 |
On the application of statistical physics to evolutionary biology
N.H. Barton, J. Coe, Journal of Theoretical Biology 259 (2009) 317–324.
[Submitted Version]
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N.H. Barton, J. Coe, Journal of Theoretical Biology 259 (2009) 317–324.
2009 | Conference Paper | IST-REx-ID: 3837 |
On relational interfaces
S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, in:, EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software, ACM, 2009, pp. 67–76.
[Submitted Version]
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S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, in:, EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software, ACM, 2009, pp. 67–76.
2009 | Conference Paper | IST-REx-ID: 3835
Synthesizing robust systems
R. Bloem, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, Springer, 2009, pp. 85–92.
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R. Bloem, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, Springer, 2009, pp. 85–92.
2009 | Journal Article | IST-REx-ID: 3954
Adaptive force transmission in amoeboid cell migration
J. Renkawitz, K. Schumann, M. Weber, T. Lämmermann, H. Pflicke, M. Piel, J. Polleux, J. Spatz, M.K. Sixt, Nature Cell Biology 11 (2009) 1438–1443.
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J. Renkawitz, K. Schumann, M. Weber, T. Lämmermann, H. Pflicke, M. Piel, J. Polleux, J. Spatz, M.K. Sixt, Nature Cell Biology 11 (2009) 1438–1443.
2009 | Journal Article | IST-REx-ID: 3952
A fundamental role of mAbp1 in neutrophils: impact on β(2) integrin-mediated phagocytosis and adhesion in vivo
J. Schymeinsky, R. Gerstl, I. Mannigel, K. Niedung, D. Frommhold, K. Panthel, J. Heesemann, M.K. Sixt, T. Quast, W. Kolanus, A. Mocsai, J. Wienands, M. Sperandio, B. Walzog, Blood 114 (2009) 4209–4220.
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| DOI
J. Schymeinsky, R. Gerstl, I. Mannigel, K. Niedung, D. Frommhold, K. Panthel, J. Heesemann, M.K. Sixt, T. Quast, W. Kolanus, A. Mocsai, J. Wienands, M. Sperandio, B. Walzog, Blood 114 (2009) 4209–4220.
2009 | Journal Article | IST-REx-ID: 3953
The sphingosine 1-phosphate receptor agonist FTY720 potently inhibits regulatory T cell proliferation in vitro and in vivo
A. Wolf, K. Eller, R. Zeiser, C. Dürr, U. Gerlach, M.K. Sixt, L. Markut, G. Gastl, A. Rosenkranz, D. Wolf, Journal of Immunology 183 (2009) 3751–3760.
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A. Wolf, K. Eller, R. Zeiser, C. Dürr, U. Gerlach, M.K. Sixt, L. Markut, G. Gastl, A. Rosenkranz, D. Wolf, Journal of Immunology 183 (2009) 3751–3760.
2009 | Journal Article | IST-REx-ID: 3955
Preformed portals facilitate dendritic cell entry into afferent lymphatic vessels
H. Pflicke, M.K. Sixt, The Journal of Experimental Medicine 206 (2009) 2925–2935.
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H. Pflicke, M.K. Sixt, The Journal of Experimental Medicine 206 (2009) 2925–2935.
2009 | Journal Article | IST-REx-ID: 3950
Kindlin-3 is required for β2 integrin-mediated leukocyte adhesion to endothelial cells
M. Moser, M. Bauer, S. Schmid, R. Ruppert, S. Schmidt, M.K. Sixt, H. Wang, M. Sperandio, R. Fässler, Nature Medicine 15 (2009) 300–305.
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M. Moser, M. Bauer, S. Schmid, R. Ruppert, S. Schmidt, M.K. Sixt, H. Wang, M. Sperandio, R. Fässler, Nature Medicine 15 (2009) 300–305.
2009 | Journal Article | IST-REx-ID: 3951
Mechanical modes of 'amoeboid' cell migration
T. Lämmermann, M.K. Sixt, Current Opinion in Cell Biology 21 (2009) 636–644.
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T. Lämmermann, M.K. Sixt, Current Opinion in Cell Biology 21 (2009) 636–644.
2009 | Conference Paper | IST-REx-ID: 3968 |
The persistent Morse complex segmentation of a 3-manifold
H. Edelsbrunner, J. Harer, in:, Springer, 2009, pp. 36–50.
[Submitted Version]
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H. Edelsbrunner, J. Harer, in:, Springer, 2009, pp. 36–50.
2009 | Journal Article | IST-REx-ID: 3966
Extending persistence using Poincare and Lefschetz duality
D. Cohen Steiner, H. Edelsbrunner, J. Harer, Foundations of Computational Mathematics 9 (2009) 79–103.
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D. Cohen Steiner, H. Edelsbrunner, J. Harer, Foundations of Computational Mathematics 9 (2009) 79–103.
2009 | Conference Paper | IST-REx-ID: 3967
Persistent homology for kernels, images, and cokernels
D. Cohen Steiner, H. Edelsbrunner, J. Harer, D. Morozov, in:, SIAM, 2009, pp. 1011–1020.
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D. Cohen Steiner, H. Edelsbrunner, J. Harer, D. Morozov, in:, SIAM, 2009, pp. 1011–1020.
2009 | Journal Article | IST-REx-ID: 4143
Trafficking and cell migration
F. Ulrich, C.-P.J. Heisenberg, Traffic 10 (2009) 811–818.
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| DOI
F. Ulrich, C.-P.J. Heisenberg, Traffic 10 (2009) 811–818.
2009 | Journal Article | IST-REx-ID: 4160
Linking organ formation to left-right patterning in the embryonic zebrafish
P. Oteíza, C. Lemus, M. Köppen, K. Palma, M. Krieg, C. Melo, C. Farias, E. Pulgar, S. Preibisch, S. Hartel, C.-P.J. Heisenberg, M. Concha, Mechanisms of Development 126 (2009) S11–S11.
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| DOI
P. Oteíza, C. Lemus, M. Köppen, K. Palma, M. Krieg, C. Melo, C. Farias, E. Pulgar, S. Preibisch, S. Hartel, C.-P.J. Heisenberg, M. Concha, Mechanisms of Development 126 (2009) S11–S11.
2009 | Journal Article | IST-REx-ID: 4162
Wnt11/Pk1a-mediated planar cell polarity signalling orchestrates epithelial organ morphogenesis by regulating N-cadherin dependent cell adhesion forces
P. Oteíza, M. Köppen, M. Krieg, S. Preibisch, S. Haertel, D. Müller, C.-P.J. Heisenberg, M. Concha, Mechanisms of Development 126 (2009) S80–S80.
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P. Oteíza, M. Köppen, M. Krieg, S. Preibisch, S. Haertel, D. Müller, C.-P.J. Heisenberg, M. Concha, Mechanisms of Development 126 (2009) S80–S80.
2009 | Journal Article | IST-REx-ID: 4158
Biology and physics of cell shape changes in development
E. Paluch, C.-P.J. Heisenberg, Current Biology 19 (2009) R790–R799.
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| DOI
E. Paluch, C.-P.J. Heisenberg, Current Biology 19 (2009) R790–R799.