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9113 Publications


2009 | Preprint | IST-REx-ID: 3732 | OA
Tkačik, Gašper, Elad Schneidman, Michael Berry, and William Bialek. “Spin Glass Models for a Network of Real Neurons.” ArXiv. ArXiv, 2009.
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2009 | Book Chapter | IST-REx-ID: 3747
Tkačik, Gašper, and William Bialek. “Cell Biology: Networks, Regulation, Pathways.” In Encyclopedia of Complexity and Systems Science, edited by R. Meyers, 719–41. Springer, 2009. https://doi.org/10.1007/978-0-387-30440-3_48.
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2009 | Journal Article | IST-REx-ID: 3764
Wojtan, Chris, Nils Thürey, Markus Gross, and Greg Turk. “Deforming Meshes That Split and Merge.” ACM Transactions on Graphics. ACM, 2009. https://doi.org/10.1145/1531326.1531382.
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2009 | Journal Article | IST-REx-ID: 3768
Kupczok, Anne, and Arndt Von Haeseler. “Comment on ‘{A} Congruence Index for Testing Topological Similarity between Trees’.” Bioinformatics. Oxford University Press, 2009. https://doi.org/4199.
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2009 | Journal Article | IST-REx-ID: 3780 | OA
Davison, Angus, Nicholas H Barton, and Bryan Clarke. “The Effect of Chirality Phenotype and Genotype on the Fecundity and Viability of Partula Suturalis and Lymnaea Stagnalis: Implications for the Evolution of Sinistral Snails.” Journal of Evolutionary Biology. Wiley, 2009. https://doi.org/10.1111/j.1420-9101.2009.01770.x.
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2009 | Journal Article | IST-REx-ID: 3828
Schwenk, Jochen, Nadine Harmel, Gerd Zolles, Wolfgang Bildl, Ákos Kulik, Bernd Heimrich, Osamu Chisaka, et al. “Functional Proteomics Identify Cornichon Proteins as Auxiliary Subunits of AMPA Receptors.” Science. American Association for the Advancement of Science, 2009. https://doi.org/10.1126/science.1167852.
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2009 | Conference Paper | IST-REx-ID: 3843 | OA
Didier, Frédéric, Thomas A Henzinger, Maria Mateescu, and Verena Wolf. “Fast Adaptive Uniformization of the Chemical Master Equation,” 4:118–27. IEEE, 2009. https://doi.org/10.1109/HiBi.2009.23.
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 3841 | OA
Henzinger, Thomas A, Barbara Jobstmann, and Verena Wolf. “Formalisms for Specifying Markovian Population Models,” 5797:3–23. Springer, 2009. https://doi.org/10.1007/978-3-642-04420-5_2.
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 3844 | OA
Henzinger, Thomas A, Christoph Kirsch, Eduardo Marques, and Ana Sokolova. “Distributed, Modular HTL,” 171–80. IEEE, 2009. https://doi.org/10.1109/RTSS.2009.9.
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 3871 | OA
Chatterjee, Krishnendu, Laurent Doyen, and Thomas A Henzinger. “Probabilistic Weighted Automata,” 5710:244–58. Springer, 2009. https://doi.org/10.1007/978-3-642-04081-8_17.
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2009 | Journal Article | IST-REx-ID: 3870 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, and Florian Horn. “Finitary Winning in Omega-Regular Games.” ACM Transactions on Computational Logic (TOCL). ACM, 2009. https://doi.org/10.1145/1614431.1614432.
[Submitted Version] View | Files available | DOI
 

2009 | Journal Article | IST-REx-ID: 3869
Chatterjee, Krishnendu, Luca De Alfaro, Marco Faella, and Axel Legay. “Qualitative Logics and Equivalences for Probabilistic Systems.” Logical Methods in Computer Science. International Federation of Computational Logic, 2009. https://doi.org/10.2168/LMCS-5(2:7)2009.
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2009 | Journal Article | IST-REx-ID: 3946 | OA
Cremer, Sylvia, and Michael K Sixt. “Analogies in the Evolution of Individual and Social Immunity.” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. Royal Society, The, 2009. https://doi.org/10.1098/rstb.2008.0166.
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2009 | Journal Article | IST-REx-ID: 3947
Lämmermann, Tim, Jörg Renkawitz, Xunwei Wu, Karin Hirsch, Cord Brakebusch, and Michael K Sixt. “Cdc42-Dependent Leading Edge Coordination Is Essential for Interstitial Dendritic Cell Migration (Plenary Paper).” Blood. American Society of Hematology, 2009. https://doi.org/10.1182/blood-2008-11-191882.
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2009 | Journal Article | IST-REx-ID: 3948
Bauer, Martina, Cord Brakebusch, Caroline Coisne, Michael K Sixt, Hartmut Wekerle, Britta Engelhardt, and Reinhard Fässler. “Β1 Integrins Differentially Control Extravasation of Inflammatory Cell Subsets into the CNS during Autoimmunity.” PNAS. National Academy of Sciences, 2009. https://doi.org/10.1073/pnas.0808909106.
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2009 | Journal Article | IST-REx-ID: 3949
Quast, Thomas, Barbara Tappertzhofen, Cora Schild, Jessica Grell, Niklas Czeloth, Reinhold Förster, Ronen Alon, et al. “Cytohesin-1 Controls the Activation of RhoA and Modulates Integrin-Dependent Adhesion and Migration of Dendritic Cells.” Blood. American Society of Hematology, 2009. https://doi.org/10.1182/blood-2008-08-176123.
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2009 | Journal Article | IST-REx-ID: 4136 | OA
Polechova, Jitka, Nicholas H Barton, and Glenn Marion. “Species’ Range: Adaptation in Space and Time.” American Naturalist. University of Chicago Press, 2009. https://doi.org/10.1086/605958.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2009 | Journal Article | IST-REx-ID: 4149
Soete, Gwen, and Carl-Philipp J Heisenberg. “The Role of the Extracellular Matrix in Kupffer’s Vesicle Formation in Zebrafish.” Mechanisms of Development. Elsevier, 2009. https://doi.org/10.1016/j.mod.2009.06.391.
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2009 | Journal Article | IST-REx-ID: 4165
Oates, Andrew, Nicole Gorfinkiel, Marcos Gonzalez Gaitan, and Carl-Philipp J Heisenberg. “Quantitative Approaches in Developmental Biology.” Nature Reviews Genetics. Nature Publishing Group, 2009. https://doi.org/10.1038/nrg2548.
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2009 | Journal Article | IST-REx-ID: 4192
Kai, Masatake, Nina Buchan, Carl-Philipp J Heisenberg, and Masazumi Tada. “Regulation of Planar Cell Polarity Signalling by the Prenylation Pathway.” Mechanisms of Development. Elsevier, 2009. https://doi.org/10.1016/j.mod.2009.06.269.
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2009 | Journal Article | IST-REx-ID: 4223
Swoboda, Jonathan, Timothy Meredith, Jennifer Campbell, Stephanie Brown, Takashi Suzuki, Mark Tobias Bollenbach, Amy Malhowski, Roy Kishony, Michael Gilmore, and Suzanne Walker. “Discovery of a Small Molecule That Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus Aureus.” ACS Chemical Biology. American Chemical Society, 2009. https://doi.org/10.1021/cb900151k.
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2009 | Journal Article | IST-REx-ID: 4228
Bollenbach, Tobias, Selwyn Quan, Remy P Chait, and Roy Kishony. “Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions.” Cell. Cell Press, 2009. https://doi.org/10.1016/j.cell.2009.10.025.
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2009 | Journal Article | IST-REx-ID: 4242 | OA
Barton, Nicholas H, and Maria De Cara. “The Evolution of Strong Reproductive Isolation.” Evolution; International Journal of Organic Evolution. Wiley, 2009. https://doi.org/10.1111/j.1558-5646.2009.00622.x.
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 4365
Seghir, Mohamed, Andreas Podelski, and Thomas Wies. “Abstraction Refinement for Quantified Array Assertions,” 3–18. Springer, 2009. https://doi.org/1556.
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2009 | Journal Article | IST-REx-ID: 3047
Titapiwatanakun, Boosaree, Joshua Blakeslee, Anindita Bandyopadhyay, Haibing Yang, Jozef Mravec, Michael Sauer, Yan Cheng, et al. “ABCB19 PGP19 Stabilises PIN1 in Membrane Microdomains in Arabidopsis.” Plant Journal. Wiley-Blackwell, 2009. https://doi.org/10.1111/j.1365-313X.2008.03668.x.
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2009 | Journal Article | IST-REx-ID: 3049
Pernisová, Markéta, Petr Klíma, Jakub Horák, Martina Válková, Jiří Malbeck, Přemysl Souček, Pavel Reichman, et al. “Cytokinins Modulate Auxin Induced Organogenesis in Plants via Regulation of the Auxin Efflux.” PNAS. National Academy of Sciences, 2009. https://doi.org/10.1073/pnas.0811539106.
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2009 | Journal Article | IST-REx-ID: 3050
Růžička, Kamil, Mária Šimášková, Jérôme Duclercq, Jan Petrášek, Eva Zažímalová, Sibu Simon, Jiří Friml, Marc Van Montagu, and Eva Benková. “Cytokinin Regulates Root Meristem Activity via Modulation of the Polar Auxin Transport.” PNAS. National Academy of Sciences, 2009. https://doi.org/10.1073/pnas.0900060106.
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2009 | Journal Article | IST-REx-ID: 3048
Tanaka, Hirokazu, Saeko Kitakura, Riet De Rycke, Ruth De Groodt, and Jiří Friml. “Fluorescence Imaging Based Screen Identifies ARF GEF Component of Early Endosomal Trafficking.” Current Biology. Cell Press, 2009. https://doi.org/10.1016/j.cub.2009.01.057.
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2009 | Journal Article | IST-REx-ID: 3054
Robert, Hélène, and Jiří Friml. “Auxin and Other Signals on the Move in Plants.” Nature Chemical Biology. Nature Publishing Group, 2009. https://doi.org/10.1038/nchembio.170.
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2009 | Journal Article | IST-REx-ID: 3052 | OA
Vanneste, Steffen, and Jiří Friml. “Auxin: A Trigger for Change in Plant Development.” Cell. Cell Press, 2009. https://doi.org/10.1016/j.cell.2009.03.001.
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2009 | Journal Article | IST-REx-ID: 3051 | OA
Weijers, Dolf, and Jiří Friml. “SnapShot: Auxin Signaling and Transport.” Cell. Cell Press, 2009. https://doi.org/10.1016/j.cell.2009.03.009.
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2009 | Journal Article | IST-REx-ID: 3053
Benková, Eva, Maria Ivanchenko, Jiří Friml, Svetlana Shishkova, and Joseph Dubrovsky. “A Morphogenetic Trigger: Is There an Emerging Concept in Plant Developmental Biology?” Trends in Plant Science. Cell Press, 2009. https://doi.org/10.1016/j.tplants.2009.01.006.
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2009 | Journal Article | IST-REx-ID: 3197 | OA
Kumar, M Pawan, Vladimir Kolmogorov, and Philip Torr. “An Analysis of Convex Relaxations for MAP Estimation of Discrete MRFs.” Journal of Machine Learning Research. Microtome Publishing, 2009.
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2009 | Conference Paper | IST-REx-ID: 3199
Vicente, Sara, Vladimir Kolmogorov, and Carsten Rother. “Joint Optimization of Segmentation and Appearance Models,” 755–62. IEEE, 2009. https://doi.org/10.1109/ICCV.2009.5459287.
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2009 | Journal Article | IST-REx-ID: 3200
Kolmogorov, Vladimir, and Akiyoshi Shioura. “New Algorithms for Convex Cost Tension Problem with Application to Computer Vision.” Discrete Optimization. Elsevier, 2009. https://doi.org/10.1016/j.disopt.2009.04.006.
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2009 | Journal Article | IST-REx-ID: 3292
Engel, Jakob, Philipp S Schmalhorst, Thilo Dörk Bousset, Vincent Ferrières, and Françoise Routier. “A Single UDP Galactofuranose Transporter Is Required for Galactofuranosylation in Aspergillus Fumigatus.” Journal of Biological Chemistry. American Society for Biochemistry and Molecular Biology, 2009. https://doi.org/10.1074/jbc.M109.070219 .
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2009 | Journal Article | IST-REx-ID: 3293
Chakraborty Tuhin, Subhra, Sarit Goswami, and Obaid Siddiqi. “Sensory Correlates of Imaginal Conditioning in Drosophila Melanogaster.” Journal of Neurogenetics. Informa Healthcare, 2009. https://doi.org/10.1080/01677060802491559 .
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2009 | Journal Article | IST-REx-ID: 3309
Uhler, Caroline. “Mastitis in Dairy Production: Estimation of Sensitivity, Specificity and Disease Prevalence in the Absence of a Gold Standard.” Journal of Agricultural Biological and Environmental Statistics. Springer, 2009. https://doi.org/10.1198/jabes.2009.0005.
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2009 | Thesis | IST-REx-ID: 3400
Schmalhorst, Philipp S. “Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus.” Gottfried Wilhelm Leibniz Universität Hannover, 2009.
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2009 | Journal Article | IST-REx-ID: 3398
Bollenbach, Mark Tobias, and Roy Kishony. “Quiet Gene Circuit More Fragile than Its Noisy Peer.” Cell. Cell Press, 2009. https://doi.org/10.1016/j.cell.2009.10.005.
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2009 | Journal Article | IST-REx-ID: 3547
Remy, Stefan, Jozsef L Csicsvari, and Heinz Beck. “Activity-Dependent Control of Neuronal Output by Local and Global Dendritic Spike Attenuation.” Neuron. Elsevier, 2009. https://doi.org/10.1016/j.neuron.2009.01.032.
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2009 | Book Chapter | IST-REx-ID: 3578
Attali, Dominique, Jean Boissonnat, and Herbert Edelsbrunner. “Stability and Computation of Medial Axes: A State-of-the-Art Report.” In Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, 109–25. Springer, 2009. https://doi.org/10.1007/b106657_6.
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2009 | Book Chapter | IST-REx-ID: 3675
Barton, Nicholas H. “Why Sex and Recombination? .” In Cold Spring Harbor Symposia on Quantitative Biology, 74:187–95. Cold Spring Harbor Laboratory Press, 2009. https://doi.org/10.1101/sqb.2009.74.030.
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2009 | Journal Article | IST-REx-ID: 3696
Lampert, Christoph, and Matthew Blaschko. “Structured Prediction by Joint Kernel Support Estimation.” Machine Learning. Springer, 2009. https://doi.org/10.1007/s10994-009-5111-0.
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2009 | Conference Paper | IST-REx-ID: 3690
Dhillon, Paramveer, Sebastian Nowozin, and Christoph Lampert. “Combining Appearance and Motion for Human Action Classification in Videos,” 22–29. IEEE, 2009. https://doi.org/10.1109/CVPRW.2009.5204237.
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2009 | Journal Article | IST-REx-ID: 3710
Lampert, Christoph, Matthew Blaschko, and Thomas Hofmann. “Efficient Subwindow Search: A Branch and Bound Framework for Object Localization.” IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE, 2009. https://doi.org/10.1109/TPAMI.2009.144.
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2009 | Conference Paper | IST-REx-ID: 3711
Dhillon, Paramveer, Sebastian Nowozin, and Christoph Lampert. “Combining Appearance and Motion for Human Action Classification in Videos,” 22–29. IEEE, 2009. https://doi.org/10.1109/CVPRW.2009.5204237.
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2009 | Book | IST-REx-ID: 3707
Lampert, Christoph. Kernel Methods in Computer Vision. Vol. 4. now publishers, 2009. https://doi.org/10.1561/0600000027.
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2009 | Conference Paper | IST-REx-ID: 3708
Nowozin, Sebastian, and Christoph Lampert. “Global Connectivity Potentials for Random Field Models,” 818–25. IEEE, 2009. https://doi.org/10.1109/CVPR.2009.5206567.
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2009 | Conference Paper | IST-REx-ID: 3709
Lampert, Christoph. “Detecting Objects in Large Image Collections and Videos by Efficient Subimage Retrieval,” 987–94. IEEE, 2009. https://doi.org/10.1109/ICCV.2009.5459359.
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