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9113 Publications


2009 | Preprint | IST-REx-ID: 3732 | OA
Tkačik, G., Schneidman, E., Berry, M., & Bialek, W. (2009). Spin glass models for a network of real neurons. ArXiv. ArXiv.
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2009 | Book Chapter | IST-REx-ID: 3747
Tkačik, G., & Bialek, W. (2009). Cell Biology: Networks, regulation, pathways. In R. Meyers (Ed.), Encyclopedia of Complexity and Systems Science (pp. 719–741). Springer. https://doi.org/10.1007/978-0-387-30440-3_48
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2009 | Journal Article | IST-REx-ID: 3764
Wojtan, C., Thürey, N., Gross, M., & Turk, G. (2009). Deforming meshes that split and merge. ACM Transactions on Graphics. ACM. https://doi.org/10.1145/1531326.1531382
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2009 | Journal Article | IST-REx-ID: 3768
Kupczok, A., & Von Haeseler, A. (2009). Comment on “{A} congruence index for testing topological similarity between trees”. Bioinformatics. Oxford University Press. https://doi.org/4199
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2009 | Journal Article | IST-REx-ID: 3780 | OA
Davison, A., Barton, N. H., & Clarke, B. (2009). The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails. Journal of Evolutionary Biology. Wiley. https://doi.org/10.1111/j.1420-9101.2009.01770.x
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2009 | Journal Article | IST-REx-ID: 3828
Schwenk, J., Harmel, N., Zolles, G., Bildl, W., Kulik, Á., Heimrich, B., … Klocker, N. (2009). Functional proteomics identify cornichon proteins as auxiliary subunits of AMPA receptors. Science. American Association for the Advancement of Science. https://doi.org/10.1126/science.1167852
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2009 | Conference Paper | IST-REx-ID: 3843 | OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2009). Fast adaptive uniformization of the chemical master equation (Vol. 4, pp. 118–127). Presented at the HIBI: High-Performance Computational Systems Biology, Trento, Italy: IEEE. https://doi.org/10.1109/HiBi.2009.23
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2009 | Conference Paper | IST-REx-ID: 3841 | OA
Henzinger, T. A., Jobstmann, B., & Wolf, V. (2009). Formalisms for specifying Markovian population models (Vol. 5797, pp. 3–23). Presented at the RP: Reachability Problems, Palaiseau, France: Springer. https://doi.org/10.1007/978-3-642-04420-5_2
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 3844 | OA
Henzinger, T. A., Kirsch, C., Marques, E., & Sokolova, A. (2009). Distributed, modular HTL (pp. 171–180). Presented at the RTSS: Real-Time Systems Symposium, Washington, DC, United States: IEEE. https://doi.org/10.1109/RTSS.2009.9
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2009 | Conference Paper | IST-REx-ID: 3871 | OA
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2009). Probabilistic weighted automata (Vol. 5710, pp. 244–258). Presented at the CONCUR: Concurrency Theory, Bologna, Italy: Springer. https://doi.org/10.1007/978-3-642-04081-8_17
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2009 | Journal Article | IST-REx-ID: 3870 | OA
Chatterjee, K., Henzinger, T. A., & Horn, F. (2009). Finitary winning in omega-regular games. ACM Transactions on Computational Logic (TOCL). ACM. https://doi.org/10.1145/1614431.1614432
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2009 | Journal Article | IST-REx-ID: 3869
Chatterjee, K., De Alfaro, L., Faella, M., & Legay, A. (2009). Qualitative logics and equivalences for probabilistic systems. Logical Methods in Computer Science. International Federation of Computational Logic. https://doi.org/10.2168/LMCS-5(2:7)2009
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2009 | Journal Article | IST-REx-ID: 3946 | OA
Cremer, S., & Sixt, M. K. (2009). Analogies in the evolution of individual and social immunity. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. Royal Society, The. https://doi.org/10.1098/rstb.2008.0166
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2009 | Journal Article | IST-REx-ID: 3947
Lämmermann, T., Renkawitz, J., Wu, X., Hirsch, K., Brakebusch, C., & Sixt, M. K. (2009). Cdc42-dependent leading edge coordination is essential for interstitial dendritic cell migration (Plenary Paper). Blood. American Society of Hematology. https://doi.org/10.1182/blood-2008-11-191882
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2009 | Journal Article | IST-REx-ID: 3948
Bauer, M., Brakebusch, C., Coisne, C., Sixt, M. K., Wekerle, H., Engelhardt, B., & Fässler, R. (2009). β1 integrins differentially control extravasation of inflammatory cell subsets into the CNS during autoimmunity. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0808909106
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2009 | Journal Article | IST-REx-ID: 3949
Quast, T., Tappertzhofen, B., Schild, C., Grell, J., Czeloth, N., Förster, R., … Kolanus, W. (2009). Cytohesin-1 controls the activation of RhoA and modulates integrin-dependent adhesion and migration of dendritic cells. Blood. American Society of Hematology. https://doi.org/10.1182/blood-2008-08-176123
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2009 | Journal Article | IST-REx-ID: 4136 | OA
Polechova, J., Barton, N. H., & Marion, G. (2009). Species’ range: Adaptation in space and time. American Naturalist. University of Chicago Press. https://doi.org/10.1086/605958
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2009 | Journal Article | IST-REx-ID: 4149
Soete, G., & Heisenberg, C.-P. J. (2009). The role of the extracellular matrix in Kupffer’s vesicle formation in zebrafish. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.391
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2009 | Journal Article | IST-REx-ID: 4165
Oates, A., Gorfinkiel, N., Gonzalez Gaitan, M., & Heisenberg, C.-P. J. (2009). Quantitative approaches in developmental biology. Nature Reviews Genetics. Nature Publishing Group. https://doi.org/10.1038/nrg2548
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2009 | Journal Article | IST-REx-ID: 4192
Kai, M., Buchan, N., Heisenberg, C.-P. J., & Tada, M. (2009). Regulation of planar cell polarity signalling by the prenylation pathway. Mechanisms of Development. Elsevier. https://doi.org/10.1016/j.mod.2009.06.269
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2009 | Journal Article | IST-REx-ID: 4223
Swoboda, J., Meredith, T., Campbell, J., Brown, S., Suzuki, T., Bollenbach, M. T., … Walker, S. (2009). Discovery of a Small Molecule that Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus aureus. ACS Chemical Biology. American Chemical Society. https://doi.org/10.1021/cb900151k
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2009 | Journal Article | IST-REx-ID: 4228
Bollenbach, T., Quan, S., Chait, R. P., & Kishony, R. (2009). Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.10.025
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2009 | Journal Article | IST-REx-ID: 4242 | OA
Barton, N. H., & De Cara, M. (2009). The evolution of strong reproductive isolation. Evolution; International Journal of Organic Evolution. Wiley. https://doi.org/10.1111/j.1558-5646.2009.00622.x
[Submitted Version] View | Files available | DOI
 

2009 | Conference Paper | IST-REx-ID: 4365
Seghir, M., Podelski, A., & Wies, T. (2009). Abstraction Refinement for Quantified Array Assertions (pp. 3–18). Presented at the SAS: Static Analysis Symposium, Springer. https://doi.org/1556
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2009 | Journal Article | IST-REx-ID: 3047
Titapiwatanakun, B., Blakeslee, J., Bandyopadhyay, A., Yang, H., Mravec, J., Sauer, M., … Murphy, A. (2009). ABCB19 PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis. Plant Journal. Wiley-Blackwell. https://doi.org/10.1111/j.1365-313X.2008.03668.x
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2009 | Journal Article | IST-REx-ID: 3049
Pernisová, M., Klíma, P., Horák, J., Válková, M., Malbeck, J., Souček, P., … Hejátko, J. (2009). Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0811539106
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2009 | Journal Article | IST-REx-ID: 3050
Růžička, K., Šimášková, M., Duclercq, J., Petrášek, J., Zažímalová, E., Simon, S., … Benková, E. (2009). Cytokinin regulates root meristem activity via modulation of the polar auxin transport. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0900060106
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2009 | Journal Article | IST-REx-ID: 3048
Tanaka, H., Kitakura, S., De Rycke, R., De Groodt, R., & Friml, J. (2009). Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2009.01.057
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2009 | Journal Article | IST-REx-ID: 3054
Robert, H., & Friml, J. (2009). Auxin and other signals on the move in plants. Nature Chemical Biology. Nature Publishing Group. https://doi.org/10.1038/nchembio.170
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2009 | Journal Article | IST-REx-ID: 3052 | OA
Vanneste, S., & Friml, J. (2009). Auxin: A trigger for change in plant development. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.03.001
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2009 | Journal Article | IST-REx-ID: 3051 | OA
Weijers, D., & Friml, J. (2009). SnapShot: Auxin signaling and transport. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.03.009
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2009 | Journal Article | IST-REx-ID: 3053
Benková, E., Ivanchenko, M., Friml, J., Shishkova, S., & Dubrovsky, J. (2009). A morphogenetic trigger: Is there an emerging concept in plant developmental biology? Trends in Plant Science. Cell Press. https://doi.org/10.1016/j.tplants.2009.01.006
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2009 | Journal Article | IST-REx-ID: 3197 | OA
Kumar, M. P., Kolmogorov, V., & Torr, P. (2009). An analysis of convex relaxations for MAP estimation of discrete MRFs. Journal of Machine Learning Research. Microtome Publishing.
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2009 | Conference Paper | IST-REx-ID: 3199
Vicente, S., Kolmogorov, V., & Rother, C. (2009). Joint optimization of segmentation and appearance models (pp. 755–762). Presented at the ICCV: International Conference on Computer Vision, IEEE. https://doi.org/10.1109/ICCV.2009.5459287
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2009 | Journal Article | IST-REx-ID: 3200
Kolmogorov, V., & Shioura, A. (2009). New algorithms for convex cost tension problem with application to computer vision. Discrete Optimization. Elsevier. https://doi.org/10.1016/j.disopt.2009.04.006
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2009 | Journal Article | IST-REx-ID: 3292
Engel, J., Schmalhorst, P. S., Dörk Bousset, T., Ferrières, V., & Routier, F. (2009). A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus. Journal of Biological Chemistry. American Society for Biochemistry and Molecular Biology. https://doi.org/10.1074/jbc.M109.070219
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2009 | Journal Article | IST-REx-ID: 3293
Chakraborty Tuhin, S., Goswami, S., & Siddiqi, O. (2009). Sensory correlates of imaginal conditioning in Drosophila melanogaster. Journal of Neurogenetics. Informa Healthcare. https://doi.org/10.1080/01677060802491559
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2009 | Journal Article | IST-REx-ID: 3309
Uhler, C. (2009). Mastitis in dairy production: Estimation of sensitivity, specificity and disease prevalence in the absence of a gold standard. Journal of Agricultural Biological and Environmental Statistics. Springer. https://doi.org/10.1198/jabes.2009.0005
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2009 | Thesis | IST-REx-ID: 3400
Schmalhorst, P. S. (2009). Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus. Gottfried Wilhelm Leibniz Universität Hannover.
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2009 | Journal Article | IST-REx-ID: 3398
Bollenbach, M. T., & Kishony, R. (2009). Quiet gene circuit more fragile than its noisy peer. Cell. Cell Press. https://doi.org/10.1016/j.cell.2009.10.005
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2009 | Journal Article | IST-REx-ID: 3547
Remy, S., Csicsvari, J. L., & Beck, H. (2009). Activity-dependent control of neuronal output by local and global dendritic spike attenuation. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2009.01.032
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2009 | Book Chapter | IST-REx-ID: 3578
Attali, D., Boissonnat, J., & Edelsbrunner, H. (2009). Stability and computation of medial axes: a state-of-the-art report. In Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration (pp. 109–125). Springer. https://doi.org/10.1007/b106657_6
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2009 | Book Chapter | IST-REx-ID: 3675
Barton, N. H. (2009). Why sex and recombination? . In Cold Spring Harbor Symposia on Quantitative Biology (Vol. 74, pp. 187–195). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/sqb.2009.74.030
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2009 | Journal Article | IST-REx-ID: 3696
Lampert, C., & Blaschko, M. (2009). Structured prediction by joint kernel support estimation. Machine Learning. Springer. https://doi.org/10.1007/s10994-009-5111-0
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2009 | Conference Paper | IST-REx-ID: 3690
Dhillon, P., Nowozin, S., & Lampert, C. (2009). Combining appearance and motion for human action classification in videos (pp. 22–29). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPRW.2009.5204237
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2009 | Journal Article | IST-REx-ID: 3710
Lampert, C., Blaschko, M., & Hofmann, T. (2009). Efficient subwindow search: A branch and bound framework for object localization. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. https://doi.org/10.1109/TPAMI.2009.144
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2009 | Conference Paper | IST-REx-ID: 3711
Dhillon, P., Nowozin, S., & Lampert, C. (2009). Combining appearance and motion for human action classification in videos (pp. 22–29). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPRW.2009.5204237
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2009 | Book | IST-REx-ID: 3707
Lampert, C. (2009). Kernel Methods in Computer Vision (Vol. 4). now publishers. https://doi.org/10.1561/0600000027
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2009 | Conference Paper | IST-REx-ID: 3708
Nowozin, S., & Lampert, C. (2009). Global connectivity potentials for random field models (pp. 818–825). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2009.5206567
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2009 | Conference Paper | IST-REx-ID: 3709
Lampert, C. (2009). Detecting objects in large image collections and videos by efficient subimage retrieval (pp. 987–994). Presented at the ICCV: International Conference on Computer Vision, IEEE. https://doi.org/10.1109/ICCV.2009.5459359
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