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5939 Publications
2024 | Published | Conference Paper | IST-REx-ID: 17469 |

Kögler, K., Shevchenko, A., Hassani, H., & Mondelli, M. (2024). Compression of structured data with autoencoders: Provable benefit of nonlinearities and depth. In Proceedings of the 41st International Conference on Machine Learning (Vol. 235, pp. 24964–25015). Vienna, Austria: ML Research Press.
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2024 | Published | Thesis | IST-REx-ID: 17346 |

Bollmann, L. (2024). Stability and change in the memory system during rest. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:17346
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2024 | Published | Thesis | IST-REx-ID: 14821 |

Chiossi, H. S. C. (2024). Adaptive hierarchical representations in the hippocampus. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:14821
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2024 | Published | Thesis | IST-REx-ID: 18661 |

Santana de Freitas Amaral, M. (2024). Archaeal membranes : In silico modelling and design. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18661
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2024 | Published | Thesis | IST-REx-ID: 18642 |

Machnik, N. N. (2024). Algorithms for causal learning and comparative analysis for genomic data. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18642
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2024 | Published | Preprint | IST-REx-ID: 18648 |

Machnik, N. N., Mahmoudi, S. M., Borczyk, M., Krätschmer, I., Bauer, M. J., & Robinson, M. R. (2024). Causal inference for multiple risk factors and diseases from genomics data. bioRxiv. https://doi.org/10.1101/2023.12.06.570392
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2024 | Draft | Preprint | IST-REx-ID: 18670 |

Santana de Freitas Amaral, M., Frey, F. F., Jiang, X., Baum, B., & Šarić, A. (n.d.). Stability vs flexibility: Reshaping archaeal membranes in silico. bioRxiv. https://doi.org/10.1101/2024.10.18.619072
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2024 | Published | Thesis | IST-REx-ID: 17119 |

Kelemen, R. K. (2024). Characterizing the sequence and expression evolution of the t-haplotype, a model meiotic driver. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:17119
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2024 | Published | Thesis | IST-REx-ID: 18531 |

Mrnjavac, A. (2024). Early stages of sex chromosome evolution. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18531
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2024 | Draft | Preprint | IST-REx-ID: 18549 |

Mrnjavac, A., & Vicoso, B. (n.d.). Evidence of a Slower-Z effect in Schistosoma japonicum. bioRxiv. https://doi.org/10.1101/2024.07.02.601697
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2024 | Published | Journal Article | IST-REx-ID: 18063 |

Peng, Y., Ji, K., Mao, Y., Wang, Y., Korbei, B., Luschnig, C., … Tan, S. (2024). Polarly localized Bro1 domain proteins regulate PIN-FORMED abundance and root gravitropic growth in Arabidopsis. Communications Biology. Springer Nature. https://doi.org/10.1038/s42003-024-06747-9
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| PubMed | Europe PMC
2024 | Published | Journal Article | IST-REx-ID: 15297 |

Svoboda, J., Joshi, S. S., Tkadlec, J., & Chatterjee, K. (2024). Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012008
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| arXiv
2024 | Published | Journal Article | IST-REx-ID: 18703 |

Svoboda, J., & Chatterjee, K. (2024). Density amplifiers of cooperation for spatial games. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2405605121
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2023 | Published | Journal Article | IST-REx-ID: 13128 |

Mohammadi, A., Pham, T., & Wang, Y. (2023). An energy decomposition theorem for matrices and related questions. Canadian Mathematical Bulletin. Cambridge University Press. https://doi.org/10.4153/S000843952300036X
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2023 | Published | Journal Article | IST-REx-ID: 13138 |

Orlov, P., Tiutiakina, A., Sharipov, R., Petrova, E., Gritsev, V., & Kurlov, D. V. (2023). Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain. Physical Review B. American Physical Society. https://doi.org/10.1103/PhysRevB.107.184312
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| arXiv
2023 | Published | Conference Paper | IST-REx-ID: 13139 |

Meggendorfer, T. (2023). Correct approximation of stationary distributions. In TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems (Vol. 13993, pp. 489–507). Paris, France: Springer Nature. https://doi.org/10.1007/978-3-031-30823-9_25
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2023 | Published | Conference Paper | IST-REx-ID: 13141 |

Anand, A., Mallik, K., Nayak, S. P., & Schmuck, A. K. (2023). Computing adequately permissive assumptions for synthesis. In TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems (Vol. 13994, pp. 211–228). Paris, France: Springer Nature. https://doi.org/10.1007/978-3-031-30820-8_15
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2023 | Published | Conference Paper | IST-REx-ID: 13143 |

Hoffmann, C., Hubáček, P., Kamath, C., & Pietrzak, K. Z. (2023). Certifying giant nonprimes. In Public-Key Cryptography - PKC 2023 (Vol. 13940, pp. 530–553). Atlanta, GA, United States: Springer Nature. https://doi.org/10.1007/978-3-031-31368-4_19
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2023 | Published | Conference Abstract | IST-REx-ID: 13161 |

Schlögl, A., Elefante, S., & Hodirnau, V.-V. (2023). Running Windows-applications on a Linux HPC cluster using WINE. In ASHPC23 - Austrian-Slovenian HPC Meeting 2023 (pp. 59–59). Maribor, Slovenia: EuroCC.
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2023 | Published | Conference Abstract | IST-REx-ID: 13162 |

Elefante, S., Stadlbauer, S., Alexander, M. F., & Schlögl, A. (2023). Cryo-EM software packages: A sys-admins point of view. In ASHPC23 - Austrian-Slovenian HPC Meeting 2023 (pp. 42–42). Maribor, Slovenia: EuroCC.
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