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144 Publications
2024 | Journal Article | IST-REx-ID: 14826 | 
Kuhn A, Roosjen M, Mutte S, et al. RAF-like protein kinases mediate a deeply conserved, rapid auxin response. Cell. 2024;187(1):130-148.e17. doi:10.1016/j.cell.2023.11.021
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2024 | Journal Article | IST-REx-ID: 15033 |
Adamowski M, Matijevic I, Friml J. Developmental patterning function of GNOM ARF-GEF mediated from the cell periphery. eLife. 2024;13. doi:10.7554/elife.68993
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2024 | Journal Article | IST-REx-ID: 15257 |
Kulich I, Schmid J, Teplova A, Qi L, Friml J. Rapid translocation of NGR proteins driving polarization of PIN-activating D6 protein kinase during root gravitropism. eLife. 2024;12. doi:10.7554/elife.91523.3
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2023 | Journal Article | IST-REx-ID: 12421 |
Fäßler F, Javoor M, Schur FK. Deciphering the molecular mechanisms of actin cytoskeleton regulation in cell migration using cryo-EM. Biochemical Society Transactions. 2023;51(1):87-99. doi:10.1042/bst20220221
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2023 | Journal Article | IST-REx-ID: 13354 |
Wang J, Peled TS, Klajn R. Photocleavable anionic glues for light-responsive nanoparticle aggregates. Journal of the American Chemical Society. 2023;145(7):4098-4108. doi:10.1021/jacs.2c11973
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2023 | Journal Article | IST-REx-ID: 12163 |
Loose M, Auer A, Brognara G, Budiman HR, Kowalski LM, Matijevic I. In vitro reconstitution of small GTPase regulation. FEBS Letters. 2023;597(6):762-777. doi:10.1002/1873-3468.14540
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2023 | Journal Article | IST-REx-ID: 13989 |
Hales J, Bajpai U, Liu T, et al. Witnessing light-driven entanglement using time-resolved resonant inelastic X-ray scattering. Nature Communications. 2023;14. doi:10.1038/s41467-023-38540-3
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2023 | Journal Article | IST-REx-ID: 13216 |
Bunting R, Wodaczek F, Torabi T, Cheng B. Reactivity of single-atom alloy nanoparticles: Modeling the dehydrogenation of propane. Journal of the American Chemical Society. 2023;145(27):14894-14902. doi:10.1021/jacs.3c04030
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2023 | Journal Article | IST-REx-ID: 14683 |
Amberg N, Cheung GT, Hippenmeyer S. Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry. STAR Protocols. 2023;5(1). doi:10.1016/j.xpro.2023.102771
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2023 | Journal Article | IST-REx-ID: 14742 |
Lucek K, Giménez MD, Joron M, et al. The impact of chromosomal rearrangements in speciation: From micro- to macroevolution. Cold Spring Harbor Perspectives in Biology. 2023;15(11). doi:10.1101/cshperspect.a041447
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2023 | Journal Article | IST-REx-ID: 14770
Danzl JG, Velicky P. LIONESS enables 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20(8):1141-1142. doi:10.1038/s41592-023-01937-5
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2023 | Journal Article | IST-REx-ID: 14781 |
Westerich KJ, Tarbashevich K, Schick J, et al. Spatial organization and function of RNA molecules within phase-separated condensates in zebrafish are controlled by Dnd1. Developmental Cell. 2023;58(17):1578-1592.e5. doi:10.1016/j.devcel.2023.06.009
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2023 | Journal Article | IST-REx-ID: 12802 |
Knaus L, Basilico B, Malzl D, et al. Large neutral amino acid levels tune perinatal neuronal excitability and survival. Cell. 2023;186(9):1950-1967.e25. doi:10.1016/j.cell.2023.02.037
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2022 | Journal Article | IST-REx-ID: 11713 |
Nikolic N, Sauert M, Albanese TG, Moll I. Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli. BMC Research Notes. 2022;15. doi:10.1186/s13104-022-06061-9
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2022 | Journal Article | IST-REx-ID: 12156 |
Zoller B, Gregor T, Tkačik G. Eukaryotic gene regulation at equilibrium, or non? Current Opinion in Systems Biology. 2022;31(9). doi:10.1016/j.coisb.2022.100435
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2022 | Journal Article | IST-REx-ID: 12670 |
He S, Feng X. DNA methylation dynamics during germline development. Journal of Integrative Plant Biology. 2022;64(12):2240-2251. doi:10.1111/jipb.13422
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2022 | Journal Article | IST-REx-ID: 13348 |
Wang J, Avram L, Diskin-Posner Y, et al. Altering the properties of spiropyran switches using coordination cages with different symmetries. Journal of the American Chemical Society. 2022;144(46):21244-21254. doi:10.1021/jacs.2c08901
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2022 | Journal Article | IST-REx-ID: 13347 |
Yanshyna O, Białek MJ, Chashchikhin OV, Klajn R. Encapsulation within a coordination cage modulates the reactivity of redox-active dyes. Communications Chemistry. 2022;5. doi:10.1038/s42004-022-00658-8
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2022 | Journal Article | IST-REx-ID: 13351 |
Gemen J, Klajn R. Electron catalysis expands the supramolecular chemist’s toolbox. Chem. 2022;8(5):1183-1186. doi:10.1016/j.chempr.2022.04.022
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2022 | Journal Article | IST-REx-ID: 13350 |
Gemen J, Białek MJ, Kazes M, et al. Ternary host-guest complexes with rapid exchange kinetics and photoswitchable fluorescence. Chem. 2022;8(9):2362-2379. doi:10.1016/j.chempr.2022.05.008
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2022 | Journal Article | IST-REx-ID: 11351 |
Nicolas WJ, Fäßler F, Dutka P, Schur FK, Jensen G, Meyerowitz E. Cryo-electron tomography of the onion cell wall shows bimodally oriented cellulose fibers and reticulated homogalacturonan networks. Current Biology. 2022;32(11):P2375-2389. doi:10.1016/j.cub.2022.04.024
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2022 | Journal Article | IST-REx-ID: 11448 |
Gonzalez Somermeyer L, Fleiss A, Mishin AS, et al. Heterogeneity of the GFP fitness landscape and data-driven protein design. eLife. 2022;11. doi:10.7554/elife.75842
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2022 | Journal Article | IST-REx-ID: 11447 |
Saona Urmeneta RJ, Kondrashov F, Khudiakova K. Relation between the number of peaks and the number of reciprocal sign epistatic interactions. Bulletin of Mathematical Biology. 2022;84(8). doi:10.1007/s11538-022-01029-z
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2022 | Journal Article | IST-REx-ID: 11546 |
Westram AM, Faria R, Johannesson K, Butlin R, Barton NH. Inversions and parallel evolution. Philosophical Transactions of the Royal Society B: Biological Sciences. 2022;377(1856). doi:10.1098/rstb.2021.0203
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2022 | Journal Article | IST-REx-ID: 11951 |
Ben Simon Y, Käfer K, Velicky P, Csicsvari JL, Danzl JG, Jonas PM. A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory. Nature Communications. 2022;13. doi:10.1038/s41467-022-32559-8
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2022 | Journal Article | IST-REx-ID: 12051 |
Daiß JL, Pilsl M, Straub K, et al. The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans. Life Science Alliance. 2022;5(11). doi:10.26508/lsa.202201568
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2022 | Journal Article | IST-REx-ID: 12130 |
Huang J, Zhao L, Malik S, et al. Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis. Nature Communications. 2022;13. doi:10.1038/s41467-022-34723-6
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2022 | Journal Article | IST-REx-ID: 12157 |
Hayward L, Sella G. Polygenic adaptation after a sudden change in environment. eLife. 2022;11. doi:10.7554/elife.66697
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2022 | Journal Article | IST-REx-ID: 12208 |
Prehal C, von Mentlen J-M, Drvarič Talian S, et al. On the nanoscale structural evolution of solid discharge products in lithium-sulfur batteries using operando scattering. Nature Communications. 2022;13. doi:10.1038/s41467-022-33931-4
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2022 | Journal Article | IST-REx-ID: 12217 |
Randriamanantsoa S, Papargyriou A, Maurer HC, et al. Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids. Nature Communications. 2022;13. doi:10.1038/s41467-022-32806-y
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2022 | Journal Article | IST-REx-ID: 12224 |
Muhia MW, YuanXiang P, Sedlacik J, et al. Muskelin regulates actin-dependent synaptic changes and intrinsic brain activity relevant to behavioral and cognitive processes. Communications Biology. 2022;5. doi:10.1038/s42003-022-03446-1
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2022 | Journal Article | IST-REx-ID: 12238
Hino N, Matsuda K, Jikko Y, et al. A feedback loop between lamellipodial extension and HGF-ERK signaling specifies leader cells during collective cell migration. Developmental Cell. 2022;57(19):2290-2304.e7. doi:10.1016/j.devcel.2022.09.003
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2022 | Journal Article | IST-REx-ID: 12261 |
Angermayr A, Pang TY, Chevereau G, Mitosch K, Lercher MJ, Bollenbach MT. Growth‐mediated negative feedback shapes quantitative antibiotic response. Molecular Systems Biology. 2022;18(9). doi:10.15252/msb.202110490
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2022 | Journal Article | IST-REx-ID: 12288 |
Sumser AL, Jösch MA, Jonas PM, Ben Simon Y. Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling. eLife. 2022;11. doi:10.7554/elife.79848
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2022 | Journal Article | IST-REx-ID: 12275 |
Rahman M, Ramirez N, Diaz‐Balzac CA, Bülow HE. Specific N-glycans regulate an extracellular adhesion complex during somatosensory dendrite patterning. EMBO Reports. 2022;23(7). doi:10.15252/embr.202154163
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2022 | Journal Article | IST-REx-ID: 12120
Xiao H, Hu Y, Wang Y, et al. Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth. Developmental Cell. 2022;57(23):2638-2651.e6. doi:10.1016/j.devcel.2022.11.006
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2022 | Journal Article | IST-REx-ID: 10813 |
Cao D, Shen X, Wang A, et al. Threshold potentials for fast kinetics during mediated redox catalysis of insulators in Li–O2 and Li–S batteries. Nature Catalysis. 2022;5:193-201. doi:10.1038/s41929-022-00752-z
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2022 | Journal Article | IST-REx-ID: 12117 |
Hübschmann V, Korkut M, Siegert S. Assessing human iPSC-derived microglia identity and function by immunostaining, phagocytosis, calcium activity, and inflammation assay. STAR Protocols. 2022;3(4). doi:10.1016/j.xpro.2022.101866
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2022 | Journal Article | IST-REx-ID: 11373 |
Radler P, Baranova NS, Dos Santos Caldas PR, et al. In vitro reconstitution of Escherichia coli divisome activation. Nature Communications. 2022;13. doi:10.1038/s41467-022-30301-y
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2022 | Journal Article | IST-REx-ID: 10787 |
Barton NH, Olusanya OO. The response of a metapopulation to a changing environment. Philosophical Transactions of the Royal Society B: Biological Sciences. 2022;377(1848). doi:10.1098/rstb.2021.0009
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2022 | Journal Article | IST-REx-ID: 15268 |
Gisonno RA, Masson T, Ramella NA, Barrera EE, Romanowski V, Tricerri MA. Evolutionary and structural constraints influencing apolipoprotein A‐I amyloid behavior. Proteins: Structure, Function, and Bioinformatics. 2022;90(1):258-269. doi:10.1002/prot.26217
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2022 | Journal Article | IST-REx-ID: 11160 |
Villa CE, Cheroni C, Dotter C, et al. CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Reports. 2022;39(1). doi:10.1016/j.celrep.2022.110615
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2021 | Journal Article | IST-REx-ID: 11052
Krishna S, Arrojo e Drigo R, Capitanio JS, Ramachandra R, Ellisman M, Hetzer M. Identification of long-lived proteins in the mitochondria reveals increased stability of the electron transport chain. Developmental Cell. 2021;56(21):P2952-2965.e9. doi:10.1016/j.devcel.2021.10.008
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2021 | Journal Article | IST-REx-ID: 12585 |
Miles E, McCarthy M, Dehecq A, Kneib M, Fugger S, Pellicciotti F. Health and sustainability of glaciers in High Mountain Asia. Nature Communications. 2021;12. doi:10.1038/s41467-021-23073-4
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2021 | Journal Article | IST-REx-ID: 13356 |
Bian T, Klajn R. Morphology control in crystalline nanoparticle–polymer aggregates. Annals of the New York Academy of Sciences. 2021;1505(1):191-201. doi:10.1111/nyas.14674
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2021 | Journal Article | IST-REx-ID: 13359 |
Weißenfels M, Gemen J, Klajn R. Dissipative self-assembly: Fueling with chemicals versus light. Chem. 2021;7(1):23-37. doi:10.1016/j.chempr.2020.11.025
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2021 | Journal Article | IST-REx-ID: 9387 |
Khudiakova K, Neretina TY, Kondrashov AS. Two linked loci under mutation-selection balance and Muller’s ratchet. Journal of Theoretical Biology. 2021;524. doi:10.1016/j.jtbi.2021.110729
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2021 | Journal Article | IST-REx-ID: 9431 |
Obr M, Ricana CL, Nikulin N, et al. Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer. Nature Communications. 2021;12(1). doi:10.1038/s41467-021-23506-0
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2021 | Journal Article | IST-REx-ID: 9540 |
Prattes M, Grishkovskaya I, Hodirnau V-V, et al. Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine. Nature Communications. 2021;12(1). doi:10.1038/s41467-021-23854-x
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2021 | Journal Article | IST-REx-ID: 9778 |
Vandael DH, Okamoto Y, Jonas PM. Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses. Nature Communications. 2021;12(1). doi:10.1038/s41467-021-23153-5
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