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4193 Publications
2023 | Journal Article | IST-REx-ID: 14613 | 
The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome
C. Lasne, M.N. Elkrewi, M.A. Toups, L.A. Layana Franco, A. Macon, B. Vicoso, Molecular Biology and Evolution 40 (2023).
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C. Lasne, M.N. Elkrewi, M.A. Toups, L.A. Layana Franco, A. Macon, B. Vicoso, Molecular Biology and Evolution 40 (2023).
2023 | Research Data | IST-REx-ID: 14614 |
The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome
C. Lasne, M.N. Elkrewi, (2023).
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C. Lasne, M.N. Elkrewi, (2023).
2023 | Preprint | IST-REx-ID: 14591 |
Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants
N. Gnyliukh, A.J. Johnson, M.-K. Nagel, A. Monzer, A. Hlavata, E. Isono, M. Loose, J. Friml, BioRxiv (n.d.).
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N. Gnyliukh, A.J. Johnson, M.-K. Nagel, A. Monzer, A. Hlavata, E. Isono, M. Loose, J. Friml, BioRxiv (n.d.).
2023 | Thesis | IST-REx-ID: 12491 |
Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography
B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.
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B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12891 |
Mesendoderm formation in zebrafish gastrulation: The role of extraembryonic tissues
A. Schauer, Mesendoderm Formation in Zebrafish Gastrulation: The Role of Extraembryonic Tissues, Institute of Science and Technology Austria, 2023.
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A. Schauer, Mesendoderm Formation in Zebrafish Gastrulation: The Role of Extraembryonic Tissues, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12781 |
Structural and mechanistic study of bacterial complex I and its cyanobacterial ortholog
V. Kravchuk, Structural and Mechanistic Study of Bacterial Complex I and Its Cyanobacterial Ortholog, Institute of Science and Technology Austria, 2023.
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V. Kravchuk, Structural and Mechanistic Study of Bacterial Complex I and Its Cyanobacterial Ortholog, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12809 |
Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning
C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
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C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
2023 | Journal Article | IST-REx-ID: 13201 |
The nitrate transporter NRT2.1 directly antagonizes PIN7-mediated auxin transport for root growth adaptation
Y. Wang, Z. Yuan, J. Wang, H. Xiao, L. Wan, L. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
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Y. Wang, Z. Yuan, J. Wang, H. Xiao, L. Wan, L. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
2023 | Thesis | IST-REx-ID: 14226 |
Generalizing medial axes with homology switches
E.R. Stephenson, Generalizing Medial Axes with Homology Switches, Institute of Science and Technology Austria, 2023.
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E.R. Stephenson, Generalizing Medial Axes with Homology Switches, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12531 |
Panoramic functional gradients across the mouse retina
K. Kirillova, Panoramic Functional Gradients across the Mouse Retina, Institute of Science and Technology Austria, 2023.
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K. Kirillova, Panoramic Functional Gradients across the Mouse Retina, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12800 |
The effect of local population structure on genetic variation at selected loci in the A. majus hybrid zone
M. Julseth, The Effect of Local Population Structure on Genetic Variation at Selected Loci in the A. Majus Hybrid Zone, Institute of Science and Technology Austria, 2023.
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M. Julseth, The Effect of Local Population Structure on Genetic Variation at Selected Loci in the A. Majus Hybrid Zone, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12897 |
Inverse shape design with parametric representations: Kirchhoff Rods and parametric surface models
C. Hafner, Inverse Shape Design with Parametric Representations: Kirchhoff Rods and Parametric Surface Models, Institute of Science and Technology Austria, 2023.
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C. Hafner, Inverse Shape Design with Parametric Representations: Kirchhoff Rods and Parametric Surface Models, Institute of Science and Technology Austria, 2023.
2023 | Journal Article | IST-REx-ID: 13188 |
The design space of Kirchhoff rods
C. Hafner, B. Bickel, ACM Transactions on Graphics 42 (2023).
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C. Hafner, B. Bickel, ACM Transactions on Graphics 42 (2023).
2023 | Thesis | IST-REx-ID: 12470 |
A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy
J.M. Michalska, A Versatile Toolbox for the Comprehensive Analysis of Nervous Tissue Organization with Light Microscopy, Institute of Science and Technology Austria, 2023.
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J.M. Michalska, A Versatile Toolbox for the Comprehensive Analysis of Nervous Tissue Organization with Light Microscopy, Institute of Science and Technology Austria, 2023.
2022 | Journal Article | IST-REx-ID: 10652 |
Constraints on probing quantum coherence to infer gravitational entanglement
O. Hosten, Physical Review Research 4 (2022).
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O. Hosten, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 10758 |
1H NMR chemical exchange techniques reveal local and global effects of oxidized cytosine derivatives
R.C.A. Dubini, E. Korytiaková, T. Schinkel, P. Heinrichs, T. Carell, P. Rovo, ACS Physical Chemistry Au 2 (2022) 237–246.
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R.C.A. Dubini, E. Korytiaková, T. Schinkel, P. Heinrichs, T. Carell, P. Rovo, ACS Physical Chemistry Au 2 (2022) 237–246.
2022 | Conference Paper | IST-REx-ID: 10774 |
Flavors of sequential information flow
E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
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E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
2022 | Journal Article | IST-REx-ID: 10769 |
Non relativistic quantum field theory: Dynamics and irreversibility
L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
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L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
2022 | Preprint | IST-REx-ID: 10821 |
Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
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F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
2022 | Journal Article | IST-REx-ID: 10845 |
Impurity with a resonance in the vicinity of the Fermi energy
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
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M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 10939 |
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
2022 | Conference Paper | IST-REx-ID: 11184 |
Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 11183 |
Beyond distributed subgraph detection: Induced subgraphs, multicolored problems and graph parameters
A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Journal Article | IST-REx-ID: 11182 |
Quantifying the probing and selection of microenvironmental pores by motile immune cells
J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
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J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
2022 | Conference Paper | IST-REx-ID: 11428 |
A cautionary tale: Burning the medial axis is unstable
E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
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E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
2022 | Journal Article | IST-REx-ID: 11420 |
Mean-field analysis of piecewise linear solutions for wide ReLU networks
A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
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A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
2022 | Book Chapter | IST-REx-ID: 11440 |
The persistent homology of dual digital image constructions
B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
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B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
2022 | Journal Article | IST-REx-ID: 11444 |
From the prefect’s desk: Gerard van Swieten’s library correspondence
C.A. Chlebak, P.H. Reid, Library and Information History 38 (2022) 23–41.
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C.A. Chlebak, P.H. Reid, Library and Information History 38 (2022) 23–41.
2022 | Journal Article | IST-REx-ID: 11553 |
The dynamics of complex box mappings
T. Clark, K. Drach, O. Kozlovski, S.V. Strien, Arnold Mathematical Journal 8 (2022) 319–410.
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T. Clark, K. Drach, O. Kozlovski, S.V. Strien, Arnold Mathematical Journal 8 (2022) 319–410.
2022 | Journal Article | IST-REx-ID: 11638 |
Inferring couplings in networks across order-disorder phase transitions
V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
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V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 11702 |
The "New Synthesis"
N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Journal Article | IST-REx-ID: 11713 |
Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli
N. Nikolic, M. Sauert, T.G. Albanese, I. Moll, BMC Research Notes 15 (2022).
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N. Nikolic, M. Sauert, T.G. Albanese, I. Moll, BMC Research Notes 15 (2022).
2022 | Journal Article | IST-REx-ID: 11916 |
Kac regularity and domination of quadratic forms
M. Wirth, Advances in Operator Theory 7 (2022).
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M. Wirth, Advances in Operator Theory 7 (2022).
2022 | Journal Article | IST-REx-ID: 11991 |
An invitation to the promise constraint satisfaction problem
A. Krokhin, J. Opršal, ACM SIGLOG News 9 (2022) 30–59.
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A. Krokhin, J. Opršal, ACM SIGLOG News 9 (2022) 30–59.
2022 | Conference Paper | IST-REx-ID: 12010 |
Latent imagination facilitates zero-shot transfer in autonomous racing
A. Brunnbauer, L. Berducci, A. Brandstatter, M. Lechner, R. Hasani, D. Rus, R. Grosu, in:, 2022 International Conference on Robotics and Automation, IEEE, 2022, pp. 7513–7520.
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A. Brunnbauer, L. Berducci, A. Brandstatter, M. Lechner, R. Hasani, D. Rus, R. Grosu, in:, 2022 International Conference on Robotics and Automation, IEEE, 2022, pp. 7513–7520.
2022 | Conference Paper | IST-REx-ID: 12011 |
The capacity of causal adversarial channels
Y. Zhang, S. Jaggi, M. Langberg, A.D. Sarwate, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 2523–2528.
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Y. Zhang, S. Jaggi, M. Langberg, A.D. Sarwate, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 2523–2528.
2022 | Conference Paper | IST-REx-ID: 12016 |
Polar coded computing: The role of the scaling exponent
D. Fathollahi, M. Mondelli, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 2154–2159.
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D. Fathollahi, M. Mondelli, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 2154–2159.
2022 | Conference Paper | IST-REx-ID: 12012 |
Heterogeneous differential privacy via graphs
S. Torkamani, J.B. Ebrahimi, P. Sadeghi, R.G.L. D’Oliveira, M. Médard, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 1623–1628.
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S. Torkamani, J.B. Ebrahimi, P. Sadeghi, R.G.L. D’Oliveira, M. Médard, in:, 2022 IEEE International Symposium on Information Theory, IEEE, 2022, pp. 1623–1628.
2022 | Thesis | IST-REx-ID: 12072 |
Existence and density problems in Diophantine geometry: From norm forms to Campana points
A.L. Shute, Existence and Density Problems in Diophantine Geometry: From Norm Forms to Campana Points, Institute of Science and Technology Austria, 2022.
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A.L. Shute, Existence and Density Problems in Diophantine Geometry: From Norm Forms to Campana Points, Institute of Science and Technology Austria, 2022.
2022 | Conference Paper | IST-REx-ID: 12102 |
Algorithms and hardness results for computing cores of Markov chains
A. Ahmadi, K. Chatterjee, A.K. Goharshady, T. Meggendorfer, R. Safavi Hemami, D. Zikelic, in:, 42nd IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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A. Ahmadi, K. Chatterjee, A.K. Goharshady, T. Meggendorfer, R. Safavi Hemami, D. Zikelic, in:, 42nd IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 12101 |
Complexity of spatial games
K. Chatterjee, R. Ibsen-Jensen, I.R. Jecker, J. Svoboda, in:, 42nd IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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K. Chatterjee, R. Ibsen-Jensen, I.R. Jecker, J. Svoboda, in:, 42nd IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Journal Article | IST-REx-ID: 12111 |
Entanglement-based observables for quantum impurities
L. Stocker, S. Sack, M.S. Ferguson, O. Zilberberg, Physical Review Research 4 (2022).
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L. Stocker, S. Sack, M.S. Ferguson, O. Zilberberg, Physical Review Research 4 (2022).
2022 | Conference Paper | IST-REx-ID: 12135 |
Gloss management for consistent reproduction of real and virtual objects
B. Chen, M. Piovarci, C. Wang, H.-P. Seidel, P. Didyk, K. Myszkowski, A. Serrano, in:, SIGGRAPH Asia 2022 Conference Papers, Association for Computing Machinery, 2022.
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B. Chen, M. Piovarci, C. Wang, H.-P. Seidel, P. Didyk, K. Myszkowski, A. Serrano, in:, SIGGRAPH Asia 2022 Conference Papers, Association for Computing Machinery, 2022.
2022 | Journal Article | IST-REx-ID: 12134 |
Explosive transitions in epidemic dynamics
G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
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G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
2022 | Journal Article | IST-REx-ID: 12156 |
Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
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B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
2022 | Conference Paper | IST-REx-ID: 12171 |
Synthesis of parametric hybrid automata from time series
M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2022, pp. 337–353.
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M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2022, pp. 337–353.
2022 | Conference Paper | IST-REx-ID: 12182 |
Brief announcement: Temporal locality in online algorithms
M. Pacut, M. Parham, J. Rybicki, S. Schmid, J. Suomela, A. Tereshchenko, in:, 36th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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M. Pacut, M. Parham, J. Rybicki, S. Schmid, J. Suomela, A. Tereshchenko, in:, 36th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Journal Article | IST-REx-ID: 12177 |
Effective contraction of Skinning maps
T. Cremaschi, L. Dello Schiavo, Proceedings of the American Mathematical Society, Series B 9 (2022) 445–459.
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T. Cremaschi, L. Dello Schiavo, Proceedings of the American Mathematical Society, Series B 9 (2022) 445–459.
2022 | Journal Article | IST-REx-ID: 12179 |
On the condition number of the shifted real Ginibre ensemble
G. Cipolloni, L. Erdös, D.J. Schröder, SIAM Journal on Matrix Analysis and Applications 43 (2022) 1469–1487.
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G. Cipolloni, L. Erdös, D.J. Schröder, SIAM Journal on Matrix Analysis and Applications 43 (2022) 1469–1487.
2022 | Conference Paper | IST-REx-ID: 12229 |
Bullshark: DAG BFT protocols made practical
A. Spiegelman, N. Giridharan, A. Sonnino, E. Kokoris Kogias, in:, Proceedings of the 2022 ACM SIGSAC Conference on Computer and Communications Security, Association for Computing Machinery, 2022, pp. 2705–2718.
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A. Spiegelman, N. Giridharan, A. Sonnino, E. Kokoris Kogias, in:, Proceedings of the 2022 ACM SIGSAC Conference on Computer and Communications Security, Association for Computing Machinery, 2022, pp. 2705–2718.