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5783 Publications
2021 | Journal Article | IST-REx-ID: 15272 | 
Tang LTH, Trivedi M, Freund J, et al. The CATP-8/P5A-type ATPase functions in multiple pathways during neuronal patterning. PLOS Genetics. 2021;17(7). doi:10.1371/journal.pgen.1009475
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2021 | Journal Article | IST-REx-ID: 15269 |
Daguerre L, Medina Ramos RA, Solís M, Torroba G. Aspects of quantum information in finite density field theory. Journal of High Energy Physics. 2021;2021(3). doi:10.1007/jhep03(2021)079
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2021 | Journal Article | IST-REx-ID: 15270 |
Le D, Krasnopeeva E, Sinjab F, Pilizota T, Kim M. Active efflux leads to heterogeneous dissipation of proton motive force by protonophores in bacteria. mBio. 2021;12(4). doi:10.1128/mbio.00676-21
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2021 | Journal Article | IST-REx-ID: 9350 |
Arslan FN, Eckert J, Schmidt T, Heisenberg C-PJ. Holding it together: when cadherin meets cadherin. Biophysical Journal. 2021;120:4182-4192. doi:10.1016/j.bpj.2021.03.025
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2021 | Journal Article | IST-REx-ID: 15266 |
Overdijk EJR, Putker V, Smits J, et al. Phytophthora infestans RXLR effector AVR1 disturbs the growth of Physcomitrium patens without affecting Sec5 localization. PLoS One. 2021;16(4). doi:10.1371/journal.pone.0249637
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2021 | Journal Article | IST-REx-ID: 15267 |
Czumaj A, Davies P. Exploiting spontaneous transmissions for broadcasting and leader election in radio networks. Journal of the ACM. 2021;68(2). doi:10.1145/3446383
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2021 | Conference Paper | IST-REx-ID: 15263 |
Alimisis F, Orvieto A, Becigneul G, Lucchi A. Momentum improves optimization on Riemannian manifolds. In: Proceedings of the 24th International Conference on Artificial Intelligence and Statistics. Vol 130. ML Research Press; 2021:1351-1359.
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2021 | Conference Abstract | IST-REx-ID: 15280 |
Balazs D, Cimada da Silva J, Dunbar T, Ibáñez M, Hanrath T. Controlled reactive assembly of colloidal nanocrystal superlattices: Mechanism and kinetics. In: Proceedings of the Internet NanoGe Conference on Nanocrystals. Fundació Scito; 2021. doi:10.29363/nanoge.incnc.2021.050
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2021 | Conference Paper | IST-REx-ID: 10414 |
Chatterjee K, Goharshady EK, Novotný P, Zárevúcky J, Zikelic D. On lexicographic proof rules for probabilistic termination. In: 24th International Symposium on Formal Methods. Vol 13047. Springer Nature; 2021:619-639. doi:10.1007/978-3-030-90870-6_33
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2021 | Journal Article | IST-REx-ID: 9438 |
Vandael DH, Okamoto Y, Borges Merjane C, Vargas Barroso VM, Suter B, Jonas PM. Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses. Nature Protocols. 2021;16(6):2947–2967. doi:10.1038/s41596-021-00526-0
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2021 | Journal Article | IST-REx-ID: 8966 |
Schauer A, Heisenberg C-PJ. Reassembling gastrulation. Developmental Biology. 2021;474:71-81. doi:10.1016/j.ydbio.2020.12.014
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2021 | Thesis | IST-REx-ID: 9992 |
Hörmayer L. Wound healing in the Arabidopsis root meristem. 2021. doi:10.15479/at:ista:9992
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2021 | Journal Article | IST-REx-ID: 10816 |
Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network. Nature Computational Science. 2021;1(12):830-842. doi:10.1038/s43588-021-00157-1
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2021 | Scientific Software | IST-REx-ID: 10110 |
Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network. 2021. doi:10.15479/AT:ISTA:10110
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2021 | Preprint | IST-REx-ID: 10077 |
Nardin M, Csicsvari JL, Tkačik G, Savin C. The structure of hippocampal CA1 interactions optimizes spatial coding across experience. bioRxiv. doi:10.1101/2021.09.28.460602
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2021 | Journal Article | IST-REx-ID: 9250 |
Petit YK, Mourad E, Prehal C, et al. Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation. Nature Chemistry. 2021;13(5):465-471. doi:10.1038/s41557-021-00643-z
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2021 | Thesis | IST-REx-ID: 9623 |
Caballero Mancebo S. Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes. 2021. doi:10.15479/at:ista:9623
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2021 | Journal Article | IST-REx-ID: 9006 |
Shamipour S, Caballero Mancebo S, Heisenberg C-PJ. Cytoplasm’s got moves. Developmental Cell. 2021;56(2):P213-226. doi:10.1016/j.devcel.2020.12.002
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2021 | Journal Article | IST-REx-ID: 9429 |
Morandell J, Schwarz LA, Basilico B, et al. Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development. Nature Communications. 2021;12(1). doi:10.1038/s41467-021-23123-x
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2021 | Thesis | IST-REx-ID: 10058 |
Jirovec D. Singlet-Triplet qubits and spin-orbit interaction in 2-dimensional Ge hole gases. 2021. doi:10.15479/at:ista:10058
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2021 | Journal Article | IST-REx-ID: 8909 |
Jirovec D, Hofmann AC, Ballabio A, et al. A singlet triplet hole spin qubit in planar Ge. Nature Materials. 2021;20(8):1106–1112. doi:10.1038/s41563-021-01022-2
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2021 | Thesis | IST-REx-ID: 9397 |
Huljev K. Coordinated spatiotemporal reorganization of interstitial fluid is required for axial mesendoderm migration in zebrafish gastrulation. 2021. doi:10.15479/at:ista:9397
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2021 | Preprint | IST-REx-ID: 10066 |
Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Kruijf M de, Carballido MJ, Svab S, Kuhlmann AV, Braakman FR, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. arXiv, 2107.12975.
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2021 | Journal Article | IST-REx-ID: 9437 |
Bhandari P, Vandael DH, Fernández-Fernández D, et al. GABAB receptor auxiliary subunits modulate Cav2.3-mediated release from medial habenula terminals. eLife. 2021;10. doi:10.7554/ELIFE.68274
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2021 | Thesis | IST-REx-ID: 9562 |
Kleindienst D. 2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning. 2021. doi:10.15479/at:ista:9562
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2021 | Thesis | IST-REx-ID: 8934 |
Goharshady AK. Parameterized and algebro-geometric advances in static program analysis. 2021. doi:10.15479/AT:ISTA:8934
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2021 | Thesis | IST-REx-ID: 10307 |
Tomasek K. Pathogenic Escherichia coli hijack the host immune response. 2021. doi:10.15479/at:ista:10307
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2021 | Preprint | IST-REx-ID: 10316 |
Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. bioRxiv. doi:10.1101/2021.10.18.464770
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2021 | Journal Article | IST-REx-ID: 9010 |
Ötvös K, Marconi M, Vega A, et al. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport. EMBO Journal. 2021;40(3). doi:10.15252/embj.2020106862
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2021 | Journal Article | IST-REx-ID: 9913 |
Vega A, Fredes I, O’Brien J, et al. Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture. EMBO Reports. 2021;22(9). doi:10.15252/embr.202051813
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2021 | Thesis | IST-REx-ID: 10303 |
Abualia R. Role of hormones in nitrate regulated growth. 2021. doi:10.15479/at:ista:10303
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2021 | Thesis | IST-REx-ID: 9962 |
Hansen AH. Cell-autonomous gene function and non-cell-autonomous effects in radial projection neuron migration. 2021. doi:10.15479/at:ista:9962
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2021 | Journal Article | IST-REx-ID: 9428 |
Serbyn M, Abanin DA, Papić Z. Quantum many-body scars and weak breaking of ergodicity. Nature Physics. 2021;17(6):675–685. doi:10.1038/s41567-021-01230-2
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2021 | Journal Article | IST-REx-ID: 8931 |
Gelová Z, Gallei MC, Pernisová M, et al. Developmental roles of auxin binding protein 1 in Arabidopsis thaliana. Plant Science. 2021;303. doi:10.1016/j.plantsci.2020.110750
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2021 | Journal Article | IST-REx-ID: 9287 |
Narasimhan M, Gallei MC, Tan S, et al. Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking. Plant Physiology. 2021;186(2):1122–1142. doi:10.1093/plphys/kiab134
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2021 | Thesis | IST-REx-ID: 10083 |
Li L. Rapid cell growth regulation in Arabidopsis. 2021. doi:10.15479/at:ista:10083
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2021 | Journal Article | IST-REx-ID: 10015 |
Nikonorova N, Murphy E, Fonseca de Lima C, et al. The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators. Cells. 2021;10. doi:10.3390/cells10071665
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2021 | Preprint | IST-REx-ID: 10095 |
Li L, Verstraeten I, Roosjen M, et al. Cell surface and intracellular auxin signalling for H+-fluxes in root growth. Research Square. doi:10.21203/rs.3.rs-266395/v3
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2021 | Thesis | IST-REx-ID: 10293 |
Schmid L. Evolution of cooperation via (in)direct reciprocity under imperfect information. 2021. doi:10.15479/at:ista:10293
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2021 | Journal Article | IST-REx-ID: 9997 |
Schmid L, Shati P, Hilbe C, Chatterjee K. The evolution of indirect reciprocity under action and assessment generosity. Scientific Reports. 2021;11(1). doi:10.1038/s41598-021-96932-1
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2021 | Journal Article | IST-REx-ID: 9402 |
Schmid L, Chatterjee K, Hilbe C, Nowak MA. A unified framework of direct and indirect reciprocity. Nature Human Behaviour. 2021;5(10):1292–1302. doi:10.1038/s41562-021-01114-8
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2021 | Journal Article | IST-REx-ID: 9817 |
Hafner C, Bickel B. The design space of plane elastic curves. ACM Transactions on Graphics. 2021;40(4). doi:10.1145/3450626.3459800
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2021 | Thesis | IST-REx-ID: 10135 |
Semerádová H. Molecular mechanisms of the cytokinin-regulated endomembrane trafficking to coordinate plant organogenesis. 2021. doi:10.15479/at:ista:10135
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2021 | Thesis | IST-REx-ID: 9728 |
Agrawal N. Transition to turbulence and drag reduction in particle-laden pipe flows. 2021. doi:10.15479/at:ista:9728
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2020 | Journal Article | IST-REx-ID: 10336 |
Krausser J, Knowles TPJ, Šarić A. Physical mechanisms of amyloid nucleation on fluid membranes. Proceedings of the National Academy of Sciences. 2020;117(52):33090-33098. doi:10.1073/pnas.2007694117
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2020 | Journal Article | IST-REx-ID: 10342 |
Tian X, Leite DM, Scarpa E, et al. On the shuttling across the blood-brain barrier via tubule formation: Mechanism and cargo avidity bias. Science Advances. 2020;6(48). doi:10.1126/sciadv.abc4397
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2020 | Journal Article | IST-REx-ID: 10344 |
Forster JC, Krausser J, Vuyyuru MR, Baum B, Šarić A. Exploring the design rules for efficient membrane-reshaping nanostructures. Physical Review Letters. 2020;125(22). doi:10.1103/physrevlett.125.228101
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2020 | Journal Article | IST-REx-ID: 10341 |
Debets VE, Janssen LMC, Šarić A. Characterising the diffusion of biological nanoparticles on fluid and cross-linked membranes. Soft Matter. 2020;16(47):10628-10639. doi:10.1039/d0sm00712a
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2020 | Journal Article | IST-REx-ID: 10346 |
Hafner AE, Gyori NG, Bench CA, Davis LK, Šarić A. Modeling fibrillogenesis of collagen-mimetic molecules. Biophysical Journal. 2020;119(9):1791-1799. doi:10.1016/j.bpj.2020.09.013
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2020 | Journal Article | IST-REx-ID: 10350 |
Dear AJ, Meisl G, Šarić A, et al. Identification of on- and off-pathway oligomers in amyloid fibril formation. Chemical Science. 2020;11(24):6236-6247. doi:10.1039/c9sc06501f
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