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232 Publications
2009 | Journal Article | IST-REx-ID: 2434
Transforming spanning trees: A lower bound
K. Buchin, A. Razen, T. Uno, U. Wagner, Computational Geometry: Theory and Applications 42 (2009) 724–730.
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| DOI
K. Buchin, A. Razen, T. Uno, U. Wagner, Computational Geometry: Theory and Applications 42 (2009) 724–730.
2009 | Conference Paper | IST-REx-ID: 2433 | 
Hardness of embedding simplicial complexes in ℝd
J. Matoušek, M. Tancer, U. Wagner, in:, SIAM, 2009, pp. 855–864.
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J. Matoušek, M. Tancer, U. Wagner, in:, SIAM, 2009, pp. 855–864.
2009 | Journal Article | IST-REx-ID: 2498
Subcellular compartment-specific molecular diversity of pre- and post-synaptic GABAB-activated GIRK channels in Purkinje cells
L. Fernández Alacid, C. Aguado, F. Ciruela, R. Martín, J. Colón, M. Cabañero, M. Gassmann, M. Watanabe, R. Shigemoto, K. Wickman, B. Bettler, J. Sánchez Prieto, R. Luján, Journal of Neurochemistry 110 (2009) 1363–1376.
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L. Fernández Alacid, C. Aguado, F. Ciruela, R. Martín, J. Colón, M. Cabañero, M. Gassmann, M. Watanabe, R. Shigemoto, K. Wickman, B. Bettler, J. Sánchez Prieto, R. Luján, Journal of Neurochemistry 110 (2009) 1363–1376.
2009 | Journal Article | IST-REx-ID: 2500
Input-specific intrasynaptic arrangements of ionotropic glutamate receptors and their impact on postsynaptic responses
E. Tarusawa, K. Matsui, T. Budisantoso, E. Molnár, M. Watanabe, M. Matsui, Y. Fukazawa, R. Shigemoto, Journal of Neuroscience 29 (2009) 12896–12908.
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E. Tarusawa, K. Matsui, T. Budisantoso, E. Molnár, M. Watanabe, M. Matsui, Y. Fukazawa, R. Shigemoto, Journal of Neuroscience 29 (2009) 12896–12908.
2009 | Journal Article | IST-REx-ID: 2499 |
Crosstalk between GABAB and mGlu1a receptors reveals new insight into GPCR signal integration
M. Rives, C. Vol, Y. Fukazawa, N. Tinel, E. Trinquet, M. Ayoub, R. Shigemoto, J. Pin, L. Prezèau, EMBO Journal 28 (2009) 2195–2208.
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| DOI
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M. Rives, C. Vol, Y. Fukazawa, N. Tinel, E. Trinquet, M. Ayoub, R. Shigemoto, J. Pin, L. Prezèau, EMBO Journal 28 (2009) 2195–2208.
2009 | Journal Article | IST-REx-ID: 2502
Tuning of the Zernike phase-plate for visualization of detailed ultrastructure in complex biological specimens
Y. Fukuda, Y. Fukazawa, R. Danev, R. Shigemoto, K. Nagayama, Journal of Structural Biology 168 (2009) 476–484.
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Y. Fukuda, Y. Fukazawa, R. Danev, R. Shigemoto, K. Nagayama, Journal of Structural Biology 168 (2009) 476–484.
2009 | Journal Article | IST-REx-ID: 2501
Fluorescent Arc/Arg3.1 indicator mice: A versatile tool to study brain activity changes in vitro and in vivo
V. Grinevich, A. Kolleker, M. Eliava, N. Takada, H. Takuma, Y. Fukazawa, R. Shigemoto, D. Kuhl, J. Waters, P. Seeburg, P. Osten, Journal of Neuroscience Methods 184 (2009) 25–36.
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V. Grinevich, A. Kolleker, M. Eliava, N. Takada, H. Takuma, Y. Fukazawa, R. Shigemoto, D. Kuhl, J. Waters, P. Seeburg, P. Osten, Journal of Neuroscience Methods 184 (2009) 25–36.
2009 | Journal Article | IST-REx-ID: 2684
Large-conductance calcium-activated potassium channels in Purkinje cell plasma membranes are clustered at sites of hypolemmal microdomains
W. Kaufmann, F. Ferraguti, Y. Fukazawa, Y. Kasugai, R. Shigemoto, P. Laake, J. Sexton, P. Ruth, G. Wietzorrek, H. Knaus, J. Storm, O. Ottersen, Journal of Comparative Neurology 515 (2009) 215–230.
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| DOI
W. Kaufmann, F. Ferraguti, Y. Fukazawa, Y. Kasugai, R. Shigemoto, P. Laake, J. Sexton, P. Ruth, G. Wietzorrek, H. Knaus, J. Storm, O. Ottersen, Journal of Comparative Neurology 515 (2009) 215–230.
2009 | Journal Article | IST-REx-ID: 2680
The GABA B1a isoform mediates heterosynaptic depression at hippocampal mossy fiber synapses
N. Guetg, R. Seddik, R. Vigot, R. Tureček, M. Gassmann, K. Vogt, H. Bräuner Osborne, R. Shigemoto, O. Kretz, M. Frotscher, Á. Kulik, B. Bettler, Journal of Neuroscience 29 (2009) 1414–1423.
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N. Guetg, R. Seddik, R. Vigot, R. Tureček, M. Gassmann, K. Vogt, H. Bräuner Osborne, R. Shigemoto, O. Kretz, M. Frotscher, Á. Kulik, B. Bettler, Journal of Neuroscience 29 (2009) 1414–1423.
2009 | Journal Article | IST-REx-ID: 2683
Selective gating of glutamatergic inputs to excitatory neurons of amygdala by presynaptic GABAb receptor
B. Pan, Y. Dong, W. Ito, Y. Yanagawa, R. Shigemoto, A. Morozov, Neuron 61 (2009) 917–929.
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B. Pan, Y. Dong, W. Ito, Y. Yanagawa, R. Shigemoto, A. Morozov, Neuron 61 (2009) 917–929.
2009 | Journal Article | IST-REx-ID: 2682
Bioimaging with two-photon-induced luminescence from triangular nanoplates and nanoparticle aggregates of gold
Y. Jiang, N. Horimoto, K. Imura, K. Matsui, R. Shigemoto, Advanced Materials 21 (2009) 2309–2313.
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Y. Jiang, N. Horimoto, K. Imura, K. Matsui, R. Shigemoto, Advanced Materials 21 (2009) 2309–2313.
2009 | Journal Article | IST-REx-ID: 2685
Mice with altered myelin proteolipid protein gene expression display cognitive deficits accompanied by abnormal neuron-glia interactions and decreased conduction velocities
H. Tanaka, J. Ma, K. Tanaka, K. Takao, M. Komada, K. Tanda, A. Suzuki, T. Ishibashi, H. Baba, T. Isa, R. Shigemoto, K. Ono, T. Miyakawa, K. Ikenaka, Journal of Neuroscience 29 (2009) 8363–8371.
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H. Tanaka, J. Ma, K. Tanaka, K. Takao, M. Komada, K. Tanda, A. Suzuki, T. Ishibashi, H. Baba, T. Isa, R. Shigemoto, K. Ono, T. Miyakawa, K. Ikenaka, Journal of Neuroscience 29 (2009) 8363–8371.
2009 | Journal Article | IST-REx-ID: 2686
Visual properties of transgenic rats harboring the channelrhodopsin-2 gene regulated by the thy-1.2 promoter
H. Tomita, E. Sugano, Y. Fukazawa, H. Isago, Y. Sugiyama, T. Hiroi, T. Ishizuka, H. Mushiake, M. Kato, M. Hirabayashi, R. Shigemoto, H. Yawo, M. Tamai, PLoS One 4 (2009).
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| DOI
H. Tomita, E. Sugano, Y. Fukazawa, H. Isago, Y. Sugiyama, T. Hiroi, T. Ishizuka, H. Mushiake, M. Kato, M. Hirabayashi, R. Shigemoto, H. Yawo, M. Tamai, PLoS One 4 (2009).
2009 | Journal Article | IST-REx-ID: 2703
Semicircle law on short scales and delocalization of eigenvectors for Wigner random matrices
L. Erdös, B. Schlein, H. Yau, Annals of Probability 37 (2009) 815–852.
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L. Erdös, B. Schlein, H. Yau, Annals of Probability 37 (2009) 815–852.
2009 | Journal Article | IST-REx-ID: 2759
Dynamical formation of correlations in a Bose-Einstein condensate
L. Erdös, A. Michelangeli, B. Schlein, Communications in Mathematical Physics 289 (2009) 1171–1210.
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L. Erdös, A. Michelangeli, B. Schlein, Communications in Mathematical Physics 289 (2009) 1171–1210.
2009 | Journal Article | IST-REx-ID: 2758
Local semicircle law and complete delocalization for Wigner random matrices
L. Erdös, B. Schlein, H. Yau, Communications in Mathematical Physics 287 (2009) 641–655.
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| DOI
L. Erdös, B. Schlein, H. Yau, Communications in Mathematical Physics 287 (2009) 641–655.
2009 | Journal Article | IST-REx-ID: 2757
Quantum dynamics with mean field interactions: A new approach
L. Erdös, B. Schlein, Journal of Statistical Physics 134 (2009) 859–870.
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| DOI
L. Erdös, B. Schlein, Journal of Statistical Physics 134 (2009) 859–870.
2009 | Journal Article | IST-REx-ID: 2760
Rigorous derivation of the gross-pitaevskii equation with a large interaction potential
L. Erdös, B. Schlein, H. Yau, Journal of the American Mathematical Society 22 (2009) 1099–1156.
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L. Erdös, B. Schlein, H. Yau, Journal of the American Mathematical Society 22 (2009) 1099–1156.
2009 | Conference Paper | IST-REx-ID: 2797
Quantitative measurement of the life time of turbulence in pipe flow
D. Kuik, C. Poelma, B. Hof, J. Westerweel, in:, Springer, 2009, pp. 145–148.
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D. Kuik, C. Poelma, B. Hof, J. Westerweel, in:, Springer, 2009, pp. 145–148.
2009 | Journal Article | IST-REx-ID: 2796
An experimental study of the decay of turbulent puffs in pipe flow
A. De Lózar, B. Hof, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 367 (2009) 589–599.
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A. De Lózar, B. Hof, Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences 367 (2009) 589–599.
2009 | Journal Article | IST-REx-ID: 2868
Hormone interactions at the root apical meristem
E. Benková, J. Hejátko, Plant Molecular Biology 69 (2009) 383–396.
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E. Benková, J. Hejátko, Plant Molecular Biology 69 (2009) 383–396.
2009 | Journal Article | IST-REx-ID: 2869
Arabidopsis lateral root development: an emerging story
B. Péret, B. De Rybel, I. Casimiro, E. Benková, R. Swarup, L. Laplaze, T. Beeckman, M. Bennett, Trends in Plant Science 14 (2009) 399–408.
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B. Péret, B. De Rybel, I. Casimiro, E. Benková, R. Swarup, L. Laplaze, T. Beeckman, M. Bennett, Trends in Plant Science 14 (2009) 399–408.
2009 | Journal Article | IST-REx-ID: 2932
Blossom V: A new implementation of a minimum cost perfect matching algorithm
V. Kolmogorov, Mathematical Programming Computation 1 (2009) 43–67.
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| DOI
V. Kolmogorov, Mathematical Programming Computation 1 (2009) 43–67.
2009 | Journal Article | IST-REx-ID: 3046
Parasitic nematodes modulate PIN mediated auxin transport to facilitate infection
W. Grunewald, B. Cannoot, J. Friml, G. Gheysen, PLoS Pathogens 5 (2009).
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| DOI
W. Grunewald, B. Cannoot, J. Friml, G. Gheysen, PLoS Pathogens 5 (2009).
2009 | Journal Article | IST-REx-ID: 3061 |
The PIN-FORMED (PIN) protein family of auxin transporters
P. Křeček, P. Skůpa, J. Libus, S. Naramoto, R. Tejos, J. Friml, E. Zažímalová, Genome Biology 10 (2009).
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| PubMed | Europe PMC
P. Křeček, P. Skůpa, J. Libus, S. Naramoto, R. Tejos, J. Friml, E. Zažímalová, Genome Biology 10 (2009).
2009 | Journal Article | IST-REx-ID: 3058
Subcellular homeostasis of phytohormone auxin is mediated by the ER localized PIN5 transporter
J. Mravec, P. Skůpa, A. Bailly, K. Hoyerová, P. Křeček, A. Bielach, J. Petrášek, J. Zhang, V. Gaykova, Y. Stierhof, P. Dobrev, K. Schwarzerová, J. Rolčík, D. Seifertová, C. Luschnig, E. Benková, E. Zažímalová, M. Geisler, J. Friml, Nature 459 (2009) 1136–1140.
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J. Mravec, P. Skůpa, A. Bailly, K. Hoyerová, P. Křeček, A. Bielach, J. Petrášek, J. Zhang, V. Gaykova, Y. Stierhof, P. Dobrev, K. Schwarzerová, J. Rolčík, D. Seifertová, C. Luschnig, E. Benková, E. Zažímalová, M. Geisler, J. Friml, Nature 459 (2009) 1136–1140.
2009 | Journal Article | IST-REx-ID: 3055
Phosphoinositide-dependent regulation of VAN3 ARF-GAP localization and activity essential for vascular tissue continuity in plants
S. Naramoto, S. Sawa, K. Koizumi, T. Uemura, T. Ueda, J. Friml, A. Nakano, H. Fukuda, Development 136 (2009) 1529–1538.
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S. Naramoto, S. Sawa, K. Koizumi, T. Uemura, T. Ueda, J. Friml, A. Nakano, H. Fukuda, Development 136 (2009) 1529–1538.
2009 | Journal Article | IST-REx-ID: 3059
PIN auxin efflux carrier polarity is regulated by PINOID kinase mediated recruitment into GNOM independent trafficking in arabidopsis
J. Kleine Vehn, F. Huang, S. Naramoto, J. Zhang, M. Michniewicz, R. Offringa, J. Friml, Plant Cell 21 (2009) 3839–3849.
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J. Kleine Vehn, F. Huang, S. Naramoto, J. Zhang, M. Michniewicz, R. Offringa, J. Friml, Plant Cell 21 (2009) 3839–3849.
2009 | Journal Article | IST-REx-ID: 3056
A regulated auxin minimum is required for seed dispersal in Arabidopsis
K. Sorefan, T. Girin, S. Liljegren, K. Ljung, P. Robles, C. Galván Ampudia, R. Offringa, J. Friml, M. Yanofsky, L. Østergaard, Nature 459 (2009) 583–586.
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| DOI
K. Sorefan, T. Girin, S. Liljegren, K. Ljung, P. Robles, C. Galván Ampudia, R. Offringa, J. Friml, M. Yanofsky, L. Østergaard, Nature 459 (2009) 583–586.
2009 | Journal Article | IST-REx-ID: 3057 |
Auxin transport routes in plant development
J. Petrášek, J. Friml, Development 136 (2009) 2675–2688.
[Published Version]
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| PubMed | Europe PMC
J. Petrášek, J. Friml, Development 136 (2009) 2675–2688.
2009 | Journal Article | IST-REx-ID: 3060
Cell biology
K. Schumacher, J. Friml, Current Opinion in Plant Biology 12 (2009) 651–652.
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K. Schumacher, J. Friml, Current Opinion in Plant Biology 12 (2009) 651–652.
2009 | Conference Paper | IST-REx-ID: 3203
A global perspective on MAP inference for low level vision
O. Woodford, C. Rother, V. Kolmogorov, in:, IEEE, 2009, pp. 2319–2326.
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| DOI
O. Woodford, C. Rother, V. Kolmogorov, in:, IEEE, 2009, pp. 2319–2326.
2009 | Conference Paper | IST-REx-ID: 3230
A new randomness extraction paradigm for hybrid encryption
E. Kiltz, K.Z. Pietrzak, M. Stam, M. Yung, in:, Springer, 2009, pp. 590–609.
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| DOI
E. Kiltz, K.Z. Pietrzak, M. Stam, M. Yung, in:, Springer, 2009, pp. 590–609.
2009 | Conference Paper | IST-REx-ID: 3231
On the security of padding based encryption schemes Why We cannot prove OAEP secure in the standard model
E. Kiltz, K.Z. Pietrzak, in:, Springer, 2009, pp. 389–406.
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| DOI
E. Kiltz, K.Z. Pietrzak, in:, Springer, 2009, pp. 389–406.
2009 | Conference Paper | IST-REx-ID: 3232
A leakage resilient mode of operation
K.Z. Pietrzak, in:, Springer, 2009, pp. 462–482.
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| DOI
K.Z. Pietrzak, in:, Springer, 2009, pp. 462–482.
2009 | Journal Article | IST-REx-ID: 3304
The rate at which asexual populations cross fitness valleys
D. Weissman, M. Desai, D. Fisher, M. Feldman, Theoretical Population Biology 75 (2009) 286–300.
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D. Weissman, M. Desai, D. Fisher, M. Feldman, Theoretical Population Biology 75 (2009) 286–300.
2009 | Journal Article | IST-REx-ID: 337
Reaction regimes on the synthesis of hollow particles by the Kirkendall effect
A. Cabot, M. Ibáñez, P. Guardia, P. Alivisatos, Journal of the American Chemical Society 131 (2009) 11326–11328.
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| DOI
A. Cabot, M. Ibáñez, P. Guardia, P. Alivisatos, Journal of the American Chemical Society 131 (2009) 11326–11328.
2009 | Journal Article | IST-REx-ID: 3408
Periodic forces trigger a complex mechanical response in ubiquitin
P. Szymczak, H.L. Janovjak, Journal of Molecular Biology 390 (2009) 443–456.
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P. Szymczak, H.L. Janovjak, Journal of Molecular Biology 390 (2009) 443–456.
2009 | Journal Article | IST-REx-ID: 3428
Hydroxyurea triggers cellular responses that actively cause bacterial cell death
M.T. Bollenbach, R. Kishony, Molecular Cell 36 (2009) 728–729.
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M.T. Bollenbach, R. Kishony, Molecular Cell 36 (2009) 728–729.
2009 | Conference Paper | IST-REx-ID: 3503 |
Probabilistic systems with limsup and liminf objectives
K. Chatterjee, T.A. Henzinger, in:, Springer, 2009, pp. 32–45.
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K. Chatterjee, T.A. Henzinger, in:, Springer, 2009, pp. 32–45.
2009 | Conference Poster | IST-REx-ID: 3699
Semi-supervised analysis of human fMRI data
M. Blaschko, C. Lampert, A. Bartels, Semi-Supervised Analysis of Human FMRI Data, Berlin Institute of Technology, 2009.
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M. Blaschko, C. Lampert, A. Bartels, Semi-Supervised Analysis of Human FMRI Data, Berlin Institute of Technology, 2009.
2009 | Conference Paper | IST-REx-ID: 3703
Object localization with global and local context kernels
M. Blaschko, C. Lampert, in:, BMVA Press, 2009, pp. 1–11.
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M. Blaschko, C. Lampert, in:, BMVA Press, 2009, pp. 1–11.
2009 | Conference Paper | IST-REx-ID: 3704
Learning to detect unseen object classes by between-class attribute transfer
C. Lampert, H. Nickisch, S. Harmeling, in:, IEEE, 2009, pp. 951–958.
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| DOI
C. Lampert, H. Nickisch, S. Harmeling, in:, IEEE, 2009, pp. 951–958.
2009 | Conference Paper | IST-REx-ID: 3715
Active structured learning for high-speed object detection
C. Lampert, J. Peters, in:, Springer, 2009, pp. 221–231.
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| DOI
C. Lampert, J. Peters, in:, Springer, 2009, pp. 221–231.
2009 | Conference Poster | IST-REx-ID: 3717
A high-speed object tracker from off-the-shelf components
C. Lampert, J. Peters, A High-Speed Object Tracker from off-the-Shelf Components, IEEE, 2009.
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C. Lampert, J. Peters, A High-Speed Object Tracker from off-the-Shelf Components, IEEE, 2009.
2009 | Journal Article | IST-REx-ID: 3737
Optimizing information flow in small genetic networks
G. Tkačik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 80 (2009).
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G. Tkačik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 80 (2009).
2009 | Journal Article | IST-REx-ID: 3733
The dynamics of adaptation on correlated fitness landscapes
S. Kryazhimskiy, G. Tkačik, J. Plotkin, PNAS 106 (2009) 18638–18643.
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S. Kryazhimskiy, G. Tkačik, J. Plotkin, PNAS 106 (2009) 18638–18643.
2009 | Preprint | IST-REx-ID: 3732 |
Spin glass models for a network of real neurons
G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv q-NC (2009).
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G. Tkačik, E. Schneidman, M. Berry, W. Bialek, ArXiv q-NC (2009).
2009 | Book Chapter | IST-REx-ID: 3747
Cell Biology: Networks, regulation, pathways
G. Tkačik, W. Bialek, in:, R. Meyers (Ed.), Encyclopedia of Complexity and Systems Science, Springer, 2009, pp. 719–741.
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G. Tkačik, W. Bialek, in:, R. Meyers (Ed.), Encyclopedia of Complexity and Systems Science, Springer, 2009, pp. 719–741.
2009 | Journal Article | IST-REx-ID: 3764
Deforming meshes that split and merge
C. Wojtan, N. Thürey, M. Gross, G. Turk, ACM Transactions on Graphics 28 (2009).
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C. Wojtan, N. Thürey, M. Gross, G. Turk, ACM Transactions on Graphics 28 (2009).
2009 | Journal Article | IST-REx-ID: 3768
Comment on '{A} congruence index for testing topological similarity between trees'.
A. Kupczok, A. Von Haeseler, Bioinformatics 25 (2009) 147–149.
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A. Kupczok, A. Von Haeseler, Bioinformatics 25 (2009) 147–149.
2009 | Journal Article | IST-REx-ID: 3780 |
The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails
A. Davison, N.H. Barton, B. Clarke, Journal of Evolutionary Biology 22 (2009) 1624–1635.
[Submitted Version]
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A. Davison, N.H. Barton, B. Clarke, Journal of Evolutionary Biology 22 (2009) 1624–1635.
2009 | Journal Article | IST-REx-ID: 3828
Functional proteomics identify cornichon proteins as auxiliary subunits of AMPA receptors
J. Schwenk, N. Harmel, G. Zolles, W. Bildl, Á. Kulik, B. Heimrich, O. Chisaka, P.M. Jonas, U. Schulte, B. Fakler, N. Klocker, Science 323 (2009) 1313–9.
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J. Schwenk, N. Harmel, G. Zolles, W. Bildl, Á. Kulik, B. Heimrich, O. Chisaka, P.M. Jonas, U. Schulte, B. Fakler, N. Klocker, Science 323 (2009) 1313–9.
2009 | Conference Paper | IST-REx-ID: 3843 |
Fast adaptive uniformization of the chemical master equation
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, IEEE, 2009, pp. 118–127.
[Submitted Version]
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F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, in:, IEEE, 2009, pp. 118–127.
2009 | Conference Paper | IST-REx-ID: 3841 |
Formalisms for specifying Markovian population models
T.A. Henzinger, B. Jobstmann, V. Wolf, in:, Springer, 2009, pp. 3–23.
[Submitted Version]
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| DOI
T.A. Henzinger, B. Jobstmann, V. Wolf, in:, Springer, 2009, pp. 3–23.
2009 | Conference Paper | IST-REx-ID: 3844 |
Distributed, modular HTL
T.A. Henzinger, C. Kirsch, E. Marques, A. Sokolova, in:, IEEE, 2009, pp. 171–180.
[Submitted Version]
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| DOI
T.A. Henzinger, C. Kirsch, E. Marques, A. Sokolova, in:, IEEE, 2009, pp. 171–180.
2009 | Conference Paper | IST-REx-ID: 3871 |
Probabilistic weighted automata
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 244–258.
[Submitted Version]
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| DOI
K. Chatterjee, L. Doyen, T.A. Henzinger, in:, Springer, 2009, pp. 244–258.
2009 | Journal Article | IST-REx-ID: 3870 |
Finitary winning in omega-regular games
K. Chatterjee, T.A. Henzinger, F. Horn, ACM Transactions on Computational Logic (TOCL) 11 (2009).
[Submitted Version]
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K. Chatterjee, T.A. Henzinger, F. Horn, ACM Transactions on Computational Logic (TOCL) 11 (2009).
2009 | Journal Article | IST-REx-ID: 3869
Qualitative logics and equivalences for probabilistic systems
K. Chatterjee, L. De Alfaro, M. Faella, A. Legay, Logical Methods in Computer Science 5 (2009).
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| DOI
K. Chatterjee, L. De Alfaro, M. Faella, A. Legay, Logical Methods in Computer Science 5 (2009).
2009 | Journal Article | IST-REx-ID: 3946 |
Analogies in the evolution of individual and social immunity
S. Cremer, M.K. Sixt, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 364 (2009) 129–142.
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S. Cremer, M.K. Sixt, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 364 (2009) 129–142.
2009 | Journal Article | IST-REx-ID: 3947
Cdc42-dependent leading edge coordination is essential for interstitial dendritic cell migration (Plenary Paper)
T. Lämmermann, J. Renkawitz, X. Wu, K. Hirsch, C. Brakebusch, M.K. Sixt, Blood 113 (2009) 5703–5710.
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T. Lämmermann, J. Renkawitz, X. Wu, K. Hirsch, C. Brakebusch, M.K. Sixt, Blood 113 (2009) 5703–5710.
2009 | Journal Article | IST-REx-ID: 3948
β1 integrins differentially control extravasation of inflammatory cell subsets into the CNS during autoimmunity
M. Bauer, C. Brakebusch, C. Coisne, M.K. Sixt, H. Wekerle, B. Engelhardt, R. Fässler, PNAS 106 (2009) 1920–1925.
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M. Bauer, C. Brakebusch, C. Coisne, M.K. Sixt, H. Wekerle, B. Engelhardt, R. Fässler, PNAS 106 (2009) 1920–1925.
2009 | Journal Article | IST-REx-ID: 3949
Cytohesin-1 controls the activation of RhoA and modulates integrin-dependent adhesion and migration of dendritic cells
T. Quast, B. Tappertzhofen, C. Schild, J. Grell, N. Czeloth, R. Förster, R. Alon, L. Fraemohs, K. Dreck, C. Weber, T. Lämmermann, M.K. Sixt, W. Kolanus, Blood 113 (2009) 5801–5810.
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| DOI
T. Quast, B. Tappertzhofen, C. Schild, J. Grell, N. Czeloth, R. Förster, R. Alon, L. Fraemohs, K. Dreck, C. Weber, T. Lämmermann, M.K. Sixt, W. Kolanus, Blood 113 (2009) 5801–5810.
2009 | Journal Article | IST-REx-ID: 4136 |
Species' range: Adaptation in space and time
J. Polechova, N.H. Barton, G. Marion, American Naturalist 174 (2009) E186–E204.
[Published Version]
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J. Polechova, N.H. Barton, G. Marion, American Naturalist 174 (2009) E186–E204.
2009 | Journal Article | IST-REx-ID: 4149
The role of the extracellular matrix in Kupffer's vesicle formation in zebrafish
G. Soete, C.-P.J. Heisenberg, Mechanisms of Development 126 (2009) S168–S168.
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G. Soete, C.-P.J. Heisenberg, Mechanisms of Development 126 (2009) S168–S168.
2009 | Journal Article | IST-REx-ID: 4165
Quantitative approaches in developmental biology
A. Oates, N. Gorfinkiel, M. Gonzalez Gaitan, C.-P.J. Heisenberg, Nature Reviews Genetics 10 (2009) 517–530.
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A. Oates, N. Gorfinkiel, M. Gonzalez Gaitan, C.-P.J. Heisenberg, Nature Reviews Genetics 10 (2009) 517–530.
2009 | Journal Article | IST-REx-ID: 4192
Regulation of planar cell polarity signalling by the prenylation pathway
M. Kai, N. Buchan, C.-P.J. Heisenberg, M. Tada, Mechanisms of Development 126 (2009) S132–S132.
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M. Kai, N. Buchan, C.-P.J. Heisenberg, M. Tada, Mechanisms of Development 126 (2009) S132–S132.
2009 | Journal Article | IST-REx-ID: 4223
Discovery of a Small Molecule that Blocks Wall Teichoic Acid Biosynthesis in Staphylococcus aureus
J. Swoboda, T. Meredith, J. Campbell, S. Brown, T. Suzuki, M.T. Bollenbach, A. Malhowski, R. Kishony, M. Gilmore, S. Walker, ACS Chemical Biology 4 (2009) 875–883.
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J. Swoboda, T. Meredith, J. Campbell, S. Brown, T. Suzuki, M.T. Bollenbach, A. Malhowski, R. Kishony, M. Gilmore, S. Walker, ACS Chemical Biology 4 (2009) 875–883.
2009 | Journal Article | IST-REx-ID: 4228
Nonoptimal Microbial Response to Antibiotics Underlies Suppressive Drug Interactions
T. Bollenbach, S. Quan, R.P. Chait, R. Kishony, Cell 139 (2009) 707–718.
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T. Bollenbach, S. Quan, R.P. Chait, R. Kishony, Cell 139 (2009) 707–718.
2009 | Journal Article | IST-REx-ID: 4242 |
The evolution of strong reproductive isolation
N.H. Barton, M. De Cara, Evolution; International Journal of Organic Evolution 63 (2009) 1171–1190.
[Submitted Version]
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N.H. Barton, M. De Cara, Evolution; International Journal of Organic Evolution 63 (2009) 1171–1190.
2009 | Conference Paper | IST-REx-ID: 4365
Abstraction Refinement for Quantified Array Assertions
M. Seghir, A. Podelski, T. Wies, in:, Springer, 2009, pp. 3–18.
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M. Seghir, A. Podelski, T. Wies, in:, Springer, 2009, pp. 3–18.
2009 | Journal Article | IST-REx-ID: 3047
ABCB19 PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis
B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
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B. Titapiwatanakun, J. Blakeslee, A. Bandyopadhyay, H. Yang, J. Mravec, M. Sauer, Y. Cheng, J. Adamec, A. Nagashima, M. Geisler, T. Sakai, J. Friml, W. Peer, A. Murphy, Plant Journal 57 (2009) 27–44.
2009 | Journal Article | IST-REx-ID: 3049
Cytokinins modulate auxin induced organogenesis in plants via regulation of the auxin efflux
M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
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M. Pernisová, P. Klíma, J. Horák, M. Válková, J. Malbeck, P. Souček, P. Reichman, K. Hoyerová, J. Dubová, J. Friml, E. Zažímalová, J. Hejátko, PNAS 106 (2009) 3609–3614.
2009 | Journal Article | IST-REx-ID: 3050
Cytokinin regulates root meristem activity via modulation of the polar auxin transport
K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
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K. Růžička, M. Šimášková, J. Duclercq, J. Petrášek, E. Zažímalová, S. Simon, J. Friml, M. Van Montagu, E. Benková, PNAS 106 (2009) 4284–4289.
2009 | Journal Article | IST-REx-ID: 3048
Fluorescence imaging based screen identifies ARF GEF component of early endosomal trafficking
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
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| DOI
H. Tanaka, S. Kitakura, R. De Rycke, R. De Groodt, J. Friml, Current Biology 19 (2009) 391–397.
2009 | Journal Article | IST-REx-ID: 3054
Auxin and other signals on the move in plants
H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
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H. Robert, J. Friml, Nature Chemical Biology 5 (2009) 325–332.
2009 | Journal Article | IST-REx-ID: 3052 |
Auxin: A trigger for change in plant development
S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
[Published Version]
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S. Vanneste, J. Friml, Cell 136 (2009) 1005–1016.
2009 | Journal Article | IST-REx-ID: 3051 |
SnapShot: Auxin signaling and transport
D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
[Published Version]
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D. Weijers, J. Friml, Cell 136 (2009) 1172–1172.
2009 | Journal Article | IST-REx-ID: 3053
A morphogenetic trigger: Is there an emerging concept in plant developmental biology?
E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
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E. Benková, M. Ivanchenko, J. Friml, S. Shishkova, J. Dubrovsky, Trends in Plant Science 14 (2009) 189–193.
2009 | Journal Article | IST-REx-ID: 3197 |
An analysis of convex relaxations for MAP estimation of discrete MRFs
M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
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M.P. Kumar, V. Kolmogorov, P. Torr, Journal of Machine Learning Research 10 (2009) 71–106.
2009 | Conference Paper | IST-REx-ID: 3199
Joint optimization of segmentation and appearance models
S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
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S. Vicente, V. Kolmogorov, C. Rother, in:, IEEE, 2009, pp. 755–762.
2009 | Journal Article | IST-REx-ID: 3200
New algorithms for convex cost tension problem with application to computer vision
V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
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V. Kolmogorov, A. Shioura, Discrete Optimization 6 (2009) 378–393.
2009 | Journal Article | IST-REx-ID: 3292
A single UDP galactofuranose transporter is required for galactofuranosylation in Aspergillus fumigatus
J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
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J. Engel, P.S. Schmalhorst, T. Dörk Bousset, V. Ferrières, F. Routier, Journal of Biological Chemistry 284 (2009) 33859–33868.
2009 | Journal Article | IST-REx-ID: 3293
Sensory correlates of imaginal conditioning in Drosophila melanogaster
S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
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S. Chakraborty Tuhin, S. Goswami, O. Siddiqi, Journal of Neurogenetics 23 (2009) 210–9.
2009 | Journal Article | IST-REx-ID: 3309
Mastitis in dairy production: Estimation of sensitivity, specificity and disease prevalence in the absence of a gold standard
C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
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C. Uhler, Journal of Agricultural Biological and Environmental Statistics 14 (2009) 79–98.
2009 | Thesis | IST-REx-ID: 3400
Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus fumigatus
P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
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P.S. Schmalhorst, Biosynthesis of Galactofuranose Containing Glycans and Their Relevance for the Pathogenic Fungus Aspergillus Fumigatus, Gottfried Wilhelm Leibniz Universität Hannover, 2009.
2009 | Journal Article | IST-REx-ID: 3398
Quiet gene circuit more fragile than its noisy peer
M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
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M.T. Bollenbach, R. Kishony, Cell 139 (2009) 460–461.
2009 | Journal Article | IST-REx-ID: 3547
Activity-dependent control of neuronal output by local and global dendritic spike attenuation
S. Remy, J.L. Csicsvari, H. Beck, Neuron 61 (2009) 906–916.
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S. Remy, J.L. Csicsvari, H. Beck, Neuron 61 (2009) 906–916.
2009 | Book Chapter | IST-REx-ID: 3578
Stability and computation of medial axes: a state-of-the-art report
D. Attali, J. Boissonnat, H. Edelsbrunner, in:, Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer, 2009, pp. 109–125.
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D. Attali, J. Boissonnat, H. Edelsbrunner, in:, Mathematical Foundations of Scientific Visualization, Computer Graphics, and Massive Data Exploration, Springer, 2009, pp. 109–125.
2009 | Book Chapter | IST-REx-ID: 3675
Why sex and recombination?
N.H. Barton, in:, Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
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N.H. Barton, in:, Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
2009 | Journal Article | IST-REx-ID: 3696
Structured prediction by joint kernel support estimation
C. Lampert, M. Blaschko, Machine Learning 77 (2009) 249–269.
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C. Lampert, M. Blaschko, Machine Learning 77 (2009) 249–269.
2009 | Conference Paper | IST-REx-ID: 3690
Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
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P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
2009 | Journal Article | IST-REx-ID: 3710
Efficient subwindow search: A branch and bound framework for object localization
C. Lampert, M. Blaschko, T. Hofmann, IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (2009) 2129–2142.
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C. Lampert, M. Blaschko, T. Hofmann, IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (2009) 2129–2142.
2009 | Conference Paper | IST-REx-ID: 3711
Combining appearance and motion for human action classification in videos
P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
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P. Dhillon, S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 22–29.
2009 | Book | IST-REx-ID: 3707
Kernel Methods in Computer Vision
C. Lampert, Kernel Methods in Computer Vision, now publishers, 2009.
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C. Lampert, Kernel Methods in Computer Vision, now publishers, 2009.
2009 | Conference Paper | IST-REx-ID: 3708
Global connectivity potentials for random field models
S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 818–825.
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S. Nowozin, C. Lampert, in:, IEEE, 2009, pp. 818–825.
2009 | Conference Paper | IST-REx-ID: 3709
Detecting objects in large image collections and videos by efficient subimage retrieval
C. Lampert, in:, IEEE, 2009, pp. 987–994.
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C. Lampert, in:, IEEE, 2009, pp. 987–994.
2009 | Journal Article | IST-REx-ID: 3745
Diffusion, dimensionality, and noise in transcriptional regulation
G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 79 (2009).
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G. Tkačik, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 79 (2009).
2009 | Journal Article | IST-REx-ID: 3775 |
On the application of statistical physics to evolutionary biology
N.H. Barton, J. Coe, Journal of Theoretical Biology 259 (2009) 317–324.
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N.H. Barton, J. Coe, Journal of Theoretical Biology 259 (2009) 317–324.
2009 | Conference Paper | IST-REx-ID: 3837 |
On relational interfaces
S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, in:, EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software, ACM, 2009, pp. 67–76.
[Submitted Version]
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S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, in:, EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software, ACM, 2009, pp. 67–76.