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4181 Publications


2011 | Conference Paper | IST-REx-ID: 9648 | OA
Gonzalez-Diaz R, Ion A, Jimenez MJ, Poyatos R. Incremental-decremental algorithm for computing AT-models and persistent homology. In: Computer Analysis of Images and Patterns. Vol 6854. Springer Nature; 2011:286-293. doi:10.1007/978-3-642-23672-3_35
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2011 | Research Data Reference | IST-REx-ID: 9762 | OA
Palero F, Abello P, Macpherson E, Beaumont M, Pascual M. Data from: Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster (Palinurus elephas). 2011. doi:10.5061/dryad.299h8
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2011 | Thesis | IST-REx-ID: 3275 | OA
Schumann K. The role of chemotactic gradients in dendritic cell migration. 2011.
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2011 | Journal Article | IST-REx-ID: 3320 | OA
Nowozin S, Lampert C. Structured learning and prediction in computer vision. Foundations and Trends in Computer Graphics and Vision. 2011;6(3-4):185-365. doi:10.1561/0600000033
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel M, Behrndt M, Jannasch A, Schaeffer E, Grill S. Measuring the complete force field of an optical trap. Optics Letters. 2011;36(7):1260-1262. doi:10.1364/OL.36.001260
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar H, Barton NH. The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface. 2011;8(58):720-739. doi:10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3393 | OA
Barton NH, Turelli M. Spatial waves of advance with bistable dynamics: Cytoplasmic and genetic analogues of Allee effects. American Naturalist. 2011;178(3):E48-E75. doi:10.1086/661246
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2010 | Conference Paper | IST-REx-ID: 10908 | OA
Blanc R, Henzinger TA, Hottelier T, Kovács L. ABC: Algebraic Bound Computation for loops. In: Clarke EM, Voronkov A, eds. Logic for Programming, Artificial Intelligence, and Reasoning. Vol 6355. LNCS. Berlin, Heidelberg: Springer Nature; 2010:103-118. doi:10.1007/978-3-642-17511-4_7
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2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok A, Schmidt H, Von Haeseler A. Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. 2010;5(1). doi:10.1186/1748-7188-5-37
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2010 | Journal Article | IST-REx-ID: 3303 | OA
Weissman D, Feldman M, Fisher D. The rate of fitness-valley crossing in sexual populations. Genetics. 2010;186(4):1389-1410. doi:10.1534/genetics.110.123240
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2010 | Conference Paper | IST-REx-ID: 3719 | OA
Feret J, Henzinger TA, Koeppl H, Petrov T. Lumpability abstractions of rule-based systems. In: Vol 40. Open Publishing Association; 2010:142-161.
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2010 | Book Chapter | IST-REx-ID: 3795 | OA
Edelsbrunner H, Morozov D, Patel A. The stability of the apparent contour of an orientable 2-manifold. In: Topological Data Analysis and Visualization: Theory, Algorithms and Applications. Springer; 2010:27-42. doi:10.1007/978-3-642-15014-2_3
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2010 | Journal Article | IST-REx-ID: 3832 | OA
Guzmán J, Jonas PM. Beyond TARPs: The growing list of auxiliary AMPAR subunits. Neuron. 2010;66(1):8-10. doi:10.1016/j.neuron.2010.04.003
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2010 | Conference Paper | IST-REx-ID: 3847 | OA
Didier F, Henzinger TA, Mateescu M, Wolf V. SABRE: A tool for the stochastic analysis of biochemical reaction networks. In: IEEE; 2010:193-194. doi:10.1109/QEST.2010.33
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2010 | Conference Paper | IST-REx-ID: 3845 | OA
Henzinger TA, Hottelier T, Kovács L, Rybalchenko A. Aligators for arrays. In: Vol 6397. Springer; 2010:348-356. doi:10.1007/978-3-642-16242-8_25
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2010 | Journal Article | IST-REx-ID: 3842 | OA
Didier F, Henzinger TA, Mateescu M, Wolf V. Fast adaptive uniformization of the chemical master equation. IET Systems Biology. 2010;4(6):441-452. doi:10.1049/iet-syb.2010.0005
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2010 | Conference Paper | IST-REx-ID: 3858 | OA
Chatterjee K, Doyen L. The complexity of partial-observation parity games. In: Vol 6397. Springer; 2010:1-14. doi:10.1007/978-3-642-16242-8_1
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2010 | Conference Paper | IST-REx-ID: 3856 | OA
Chatterjee K, Doyen L, Gimbert H, Henzinger TA. Randomness for free. In: Vol 6281. Springer; 2010:246-257. doi:10.1007/978-3-642-15155-2_23
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2010 | Conference Paper | IST-REx-ID: 3866 | OA
Bloem R, Chatterjee K, Greimel K, Henzinger TA, Jobstmann B. Robustness in the presence of liveness. In: Touili T, Cook B, Jackson P, eds. Vol 6174. Springer; 2010:410-424. doi:10.1007/978-3-642-14295-6_36
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2010 | Journal Article | IST-REx-ID: 3868 | OA
Chatterjee K, De Alfaro L, Majumdar R, Raman V. Algorithms for game metrics. Logical Methods in Computer Science. 2010;6(3):1-27. doi:10.2168/LMCS-6(3:13)2010
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2010 | Journal Article | IST-REx-ID: 4243 | OA
Barton NH, Etheridge A, Véber A. A new model for evolution in a spatial continuum. Electronic Journal of Probability. 2010;15(7):162-216. doi:10.1214/EJP.v15-741
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2010 | Book (Editor) | IST-REx-ID: 4346 | OA
Danowski P, Bergmann J, eds. Handbuch Bibliothek 2.0. Vol 41. De Gruyter; 2010. doi:10.1515/9783110232103
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2010 | Conference Paper | IST-REx-ID: 4369 | OA
Nickovic D, Piterman N. From MTL to deterministic timed automata. In: Henzinger TA, Chatterjee K, eds. Vol 6246. Springer; 2010:152-167. doi:10.1007/978-3-642-15297-9_13
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2010 | Journal Article | IST-REx-ID: 3776 | OA
Barton NH. Genetic linkage and natural selection. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1552):2559-2569. doi:10.1098/rstb.2010.0106
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2010 | Journal Article | IST-REx-ID: 3773 | OA
Barton NH. What role does natural selection play in speciation? Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1547):1825-1840. doi:10.1098/rstb.2010.0001
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2010 | Journal Article | IST-REx-ID: 3777 | OA
Barton NH. Mutation and the evolution of recombination. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1544):1281-1294. doi:10.1098/rstb.2009.0320
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2010 | Journal Article | IST-REx-ID: 3772 | OA
Barton NH. Understanding adaptation in large populations. PLoS Genetics. 2010;6(6). doi:10.1371/journal.pgen.1000987
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2010 | Journal Article | IST-REx-ID: 3790 | OA
Diz Muñoz A, Krieg M, Bergert M, et al. Control of directed cell migration in vivo by membrane-to-cortex attachment. PLoS Biology. 2010;8(11). doi:10.1371/journal.pbio.1000544
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2010 | Conference Paper | IST-REx-ID: 3793 | OA
Nowozin S, Gehler P, Lampert C. On parameter learning in CRF-based approaches to object class image segmentation. In: Vol 6316. Springer; 2010:98-111. doi:10.1007/978-3-642-15567-3_8
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2010 | Journal Article | IST-REx-ID: 3787 | OA
Palero F, Hall S, Clark P, Johnston D, Mackenzie Dodds J, Thatje S. DNA extraction from formalin-fixed tissue: new light from the deep sea. Scientia Marina. 2010;74(3):465-470. doi:10.3989/scimar.2010.74n3465
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2010 | Journal Article | IST-REx-ID: 3834 | OA
Wolf V, Goel R, Mateescu M, Henzinger TA. Solving the chemical master equation using sliding windows. BMC Systems Biology. 2010;4(42):1-19. doi:10.1186/1752-0509-4-42
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2010 | Conference Paper | IST-REx-ID: 3839 | OA
Henzinger TA, Hottelier T, Kovács L, Voronkov A. Invariant and type inference for matrices. In: Vol 5944. Springer; 2010:163-179. doi:10.1007/978-3-642-11319-2_14
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2010 | Conference Paper | IST-REx-ID: 3838 | OA
Henzinger TA, Mateescu M, Mikeev L, Wolf V. Hybrid numerical solution of the chemical master equation. In: Springer; 2010:55-65. doi:10.1145/1839764.1839772
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2010 | Conference Paper | IST-REx-ID: 3853 | OA
Chatterjee K, Doyen L, Edelsbrunner H, Henzinger TA, Rannou P. Mean-payoff automaton expressions. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:269-283. doi:10.1007/978-3-642-15375-4_19
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2010 | Conference Paper | IST-REx-ID: 3849 | OA
Bendich P, Edelsbrunner H, Kerber M, Patel A. Persistent homology under non-uniform error. In: Vol 6281. Springer; 2010:12-23. doi:10.1007/978-3-642-15155-2_2
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2010 | Conference Paper | IST-REx-ID: 3851 | OA
Chatterjee K, Doyen L. Energy parity games. In: Vol 6199. Springer; 2010:599-610. doi:10.1007/978-3-642-14162-1_50
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2010 | Conference Paper | IST-REx-ID: 3860 | OA
Chatterjee K, Doyen L, Henzinger TA, Raskin J. Generalized mean-payoff and energy games. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:505-516. doi:10.4230/LIPIcs.FSTTCS.2010.505
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2010 | Conference Paper | IST-REx-ID: 3864 | OA
Chatterjee K, Henzinger TA, Jobstmann B, Singh R. Measuring and synthesizing systems in probabilistic environments. In: Vol 6174. Springer; 2010:380-395. doi:10.1007/978-3-642-14295-6_34
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2010 | Journal Article | IST-REx-ID: 3863 | OA
Berwanger D, Chatterjee K, De Wulf M, Doyen L, Henzinger TA. Strategy construction for parity games with imperfect information. Information and Computation. 2010;208(10):1206-1220. doi:10.1016/j.ic.2009.09.006
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2010 | Journal Article | IST-REx-ID: 3861 | OA
Chatterjee K, Henzinger TA, Piterman N. Strategy logic. Information and Computation. 2010;208(6):677-693. doi:10.1016/j.ic.2009.07.004
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2010 | Journal Article | IST-REx-ID: 3901 | OA
Bendich P, Edelsbrunner H, Kerber M. Computing robustness and persistence for images. IEEE Transactions of Visualization and Computer Graphics. 2010;16(6):1251-1260. doi:10.1109/TVCG.2010.139
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2010 | Journal Article | IST-REx-ID: 4157 | OA
Papusheva E, Heisenberg C-PJ. Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis. EMBO Journal. 2010;29(16):2753-2768. doi:10.1038/emboj.2010.182
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2010 | Book Chapter | IST-REx-ID: 4339 | OA
Bergmann J, Danowski P. Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch. In: Bergmann J, Danowski P, eds. Handbuch Bibliothek 2.0. Bibliotheks- und Informationspraxis 41. De Gruyter; 2010:5-20. doi:10.1515/9783110232103
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2010 | Conference Paper | IST-REx-ID: 4378 | OA
Kuncak V, Piskac R, Suter P, Wies T. Building a calculus of data structures. In: Barthe G, Hermenegildo M, eds. Vol 5944. Springer; 2010:26-44. doi:10.1007/978-3-642-11319-2_6
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2010 | Conference Paper | IST-REx-ID: 4381 | OA
Henzinger TA, Tomar A, Singh V, Wies T, Zufferey D. FlexPRICE: Flexible provisioning of resources in a cloud environment. In: IEEE; 2010:83-90. doi:10.1109/CLOUD.2010.71
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2010 | Conference Paper | IST-REx-ID: 4382 | OA
Guerraoui R, Henzinger TA, Kapalka M, Singh V. Transactions in the jungle. In: ACM; 2010:263-272. doi:10.1145/1810479.1810529
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2010 | Conference Paper | IST-REx-ID: 4380 | OA
Henzinger TA, Tomar A, Singh V, Wies T, Zufferey D. A marketplace for cloud resources. In: ACM; 2010:1-8. doi:10.1145/1879021.1879022
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2010 | Conference Paper | IST-REx-ID: 4389 | OA
Doyen L, Henzinger TA, Legay A, Nickovic D. Robustness of sequential circuits. In: IEEE; 2010:77-84. doi:10.1109/ACSD.2010.26
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2010 | Conference Paper | IST-REx-ID: 4396 | OA
Beyer D, Henzinger TA, Théoduloz G, Zufferey D. Shape refinement through explicit heap analysis. In: Rosenblum D, Taenzer G, eds. Vol 6013. Springer; 2010:263-277. doi:10.1007/978-3-642-12029-9_19
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2010 | Journal Article | IST-REx-ID: 3867 | OA
Chatterjee K, Doyen L, Henzinger TA. Expressiveness and closure properties for quantitative languages. Logical Methods in Computer Science. 2010;6(3):1-23. doi:10.2168/LMCS-6(3:10)2010
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2010 | Conference Paper | IST-REx-ID: 488 | OA
Alur R, Cerny P. Expressiveness of streaming string transducers. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:1-12. doi:10.4230/LIPIcs.FSTTCS.2010.1
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2010 | Conference Paper | IST-REx-ID: 489 | OA
Cristau J, David C, Horn F. How do we remember the past in randomised strategies? . In: Proceedings of GandALF 2010. Vol 25. Open Publishing Association; 2010:30-39. doi:10.4204/EPTCS.25.7
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2010 | Conference Paper | IST-REx-ID: 4393 | OA
Cerny P, Henzinger TA, Radhakrishna A. Simulation distances. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:235-268. doi:10.1007/978-3-642-15375-4_18
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2010 | Technical Report | IST-REx-ID: 5388 | OA
Chatterjee K, Cerny P, Henzinger TA, Radhakrishna A, Singh R. Quantitative Synthesis for Concurrent Programs. IST Austria; 2010. doi:10.15479/AT:IST-2010-0004
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2010 | Technical Report | IST-REx-ID: 5389 | OA
Cerny P, Henzinger TA, Radhakrishna A. Simulation Distances. IST Austria; 2010. doi:10.15479/AT:IST-2010-0003
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2010 | Conference Paper | IST-REx-ID: 4390 | OA
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model checking of linearizability of concurrent list implementations. In: Vol 6174. Springer; 2010:465-479. doi:10.1007/978-3-642-14295-6_41
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2010 | Conference Paper | IST-REx-ID: 4388 | OA
Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. GIST: A solver for probabilistic games. In: Vol 6174. Springer; 2010:665-669. doi:10.1007/978-3-642-14295-6_57
[Submitted Version] View | Files available | DOI | arXiv
 

2010 | Technical Report | IST-REx-ID: 5391 | OA
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model Checking of Linearizability of Concurrent List Implementations. IST Austria; 2010. doi:10.15479/AT:IST-2010-0001
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2010 | Technical Report | IST-REx-ID: 5390 | OA
Chatterjee K, Fijalkow N. Topological, Automata-Theoretic and Logical Characterization of Finitary Languages. IST Austria; 2010. doi:10.15479/AT:IST-2010-0002
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2010 | Conference Paper | IST-REx-ID: 3855 | OA
Chatterjee K, Doyen L, Henzinger TA. Qualitative analysis of partially-observable Markov Decision Processes. In: Vol 6281. Springer; 2010:258-269. doi:10.1007/978-3-642-15155-2_24
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2010 | Journal Article | IST-REx-ID: 3779 | OA
Rosas U, Barton NH, Copsey L, Barbier De Reuille P, Coen E. Cryptic variation between species and the basis of hybrid performance. PLoS Biology. 2010;8(7). doi:10.1371/journal.pbio.1000429
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2010 | Conference Paper | IST-REx-ID: 3852 | OA
Chatterjee K, Majumdar R. Discounting in games across time scales. In: Vol 25. EPTCS; 2010:22-29. doi:10.4204/EPTCS.25.6
[Published Version] View | Files available | DOI | arXiv
 

2010 | Conference Paper | IST-REx-ID: 4361 | OA
Wies T, Zufferey D, Henzinger TA. Forward analysis of depth-bounded processes. In: Ong L, ed. Vol 6014. Springer; 2010:94-108. doi:10.1007/978-3-642-12032-9_8
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2009 | Journal Article | IST-REx-ID: 3780 | OA
Davison A, Barton NH, Clarke B. The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails. Journal of Evolutionary Biology. 2009;22(8):1624-1635. doi:10.1111/j.1420-9101.2009.01770.x
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2009 | Conference Paper | IST-REx-ID: 3843 | OA
Didier F, Henzinger TA, Mateescu M, Wolf V. Fast adaptive uniformization of the chemical master equation. In: Vol 4. IEEE; 2009:118-127. doi:10.1109/HiBi.2009.23
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2009 | Conference Paper | IST-REx-ID: 3841 | OA
Henzinger TA, Jobstmann B, Wolf V. Formalisms for specifying Markovian population models. In: Vol 5797. Springer; 2009:3-23. doi:10.1007/978-3-642-04420-5_2
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2009 | Conference Paper | IST-REx-ID: 3844 | OA
Henzinger TA, Kirsch C, Marques E, Sokolova A. Distributed, modular HTL. In: IEEE; 2009:171-180. doi:10.1109/RTSS.2009.9
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2009 | Conference Paper | IST-REx-ID: 3871 | OA
Chatterjee K, Doyen L, Henzinger TA. Probabilistic weighted automata. In: Vol 5710. Springer; 2009:244-258. doi:10.1007/978-3-642-04081-8_17
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2009 | Journal Article | IST-REx-ID: 3870 | OA
Chatterjee K, Henzinger TA, Horn F. Finitary winning in omega-regular games. ACM Transactions on Computational Logic (TOCL). 2009;11(1). doi:10.1145/1614431.1614432
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2009 | Journal Article | IST-REx-ID: 4136 | OA
Polechova J, Barton NH, Marion G. Species’ range: Adaptation in space and time. American Naturalist. 2009;174(5):E186-E204. doi:10.1086/605958
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2009 | Journal Article | IST-REx-ID: 4242 | OA
Barton NH, De Cara M. The evolution of strong reproductive isolation. Evolution; International Journal of Organic Evolution. 2009;63(5):1171-1190. doi:10.1111/j.1558-5646.2009.00622.x
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2009 | Journal Article | IST-REx-ID: 3775 | OA
Barton NH, Coe J. On the application of statistical physics to evolutionary biology. Journal of Theoretical Biology. 2009;259(2):317-324. doi:10.1016/j.jtbi.2009.03.019
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2009 | Conference Paper | IST-REx-ID: 3837 | OA
Tripakis S, Lickly B, Henzinger TA, Lee E. On relational interfaces. In: EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software. ACM; 2009:67-76. doi:10.1145/1629335.1629346
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2009 | Conference Paper | IST-REx-ID: 3968 | OA
Edelsbrunner H, Harer J. The persistent Morse complex segmentation of a 3-manifold. In: Vol 5903. Springer; 2009:36-50. doi:10.1007/978-3-642-10470-1_4
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2009 | Conference Paper | IST-REx-ID: 4542 | OA
Chatterjee K, Doyen L, Henzinger TA. Alternating weighted automata. In: Vol 5699. Springer; 2009:3-13. doi:10.1007/978-3-642-03409-1_2
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2009 | Conference Paper | IST-REx-ID: 4545 | OA
Chatterjee K, Doyen L, Henzinger TA. A survey of stochastic games with limsup and liminf objectives. In: Vol 5556. Springer; 2009:1-15. doi:10.1007/978-3-642-02930-1_1
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2009 | Conference Paper | IST-REx-ID: 4569 | OA
Bloem R, Chatterjee K, Henzinger TA, Jobstmann B. Better quality in synthesis through quantitative objectives. In: Vol 5643. Springer; 2009:140-156. doi:10.1007/978-3-642-02658-4_14
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2009 | Technical Report | IST-REx-ID: 5393 | OA
Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. Gist: A Solver for Probabilistic Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0003
[Published Version] View | Files available | DOI
 

2009 | Technical Report | IST-REx-ID: 5394 | OA
Chatterjee K, Henzinger TA, Horn F. Improved Lower Bounds for Request-Response and Finitary Streett Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0002
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2009 | Technical Report | IST-REx-ID: 5392 | OA
Chatterjee K. Probabilistic Automata on Infinite Words: Decidability and Undecidability Results. IST Austria; 2009. doi:10.15479/AT:IST-2009-0004
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2009 | Technical Report | IST-REx-ID: 5395 | OA
Chatterjee K, Doyen L, Henzinger TA. Qualitative Analysis of Partially-Observable Markov Decision Processes. IST Austria; 2009. doi:10.15479/AT:IST-2009-0001
[Published Version] View | Files available | DOI
 

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