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506 Publications


2023 | Thesis | IST-REx-ID: 12491 | OA
Zens B. Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography. 2023. doi:10.15479/at:ista:12491
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2023 | Thesis | IST-REx-ID: 12809 | OA
Alcarva C. Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning. 2023. doi:10.15479/at:ista:12809
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2022 | Journal Article | IST-REx-ID: 10758 | OA
Dubini RCA, Korytiaková E, Schinkel T, Heinrichs P, Carell T, Rovo P. 1H NMR chemical exchange techniques reveal local and global effects of oxidized cytosine derivatives. ACS Physical Chemistry Au. 2022;2(3):237-246. doi:10.1021/acsphyschemau.1c00050
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2022 | Journal Article | IST-REx-ID: 11490 | OA
Matthee JJ, Feltre A, Maseda M, et al. Deciphering stellar metallicities in the early universe: Case study of a young galaxy at z = 4.77 in the MUSE eXtremely Deep Field. Astronomy & Astrophysics. 2022;660. doi:10.1051/0004-6361/202142187
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2022 | Journal Article | IST-REx-ID: 11509 | OA
Isobe Y, Ouchi M, Suzuki A, Moriya TJ, Nakajima K, Nomoto K, Rauch M, Harikane Y, Kojima T, Ono Y, Fujimoto S, Inoue AK, Kim JH, Komiyama Y, Kusakabe H, Lee C-H, Maseda M, Matthee JJ, Michel-Dansac L, Nagao T, Nanayakkara T, Nishigaki M, Onodera M, Sugahara Y, Xu Y. 2022. EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 104-105⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae. The Astrophysical Journal. 925(2), 111.
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2022 | Journal Article | IST-REx-ID: 11713 | OA
Nikolic N, Sauert M, Albanese TG, Moll I. Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli. BMC Research Notes. 2022;15. doi:10.1186/s13104-022-06061-9
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2022 | Conference Paper | IST-REx-ID: 11918
Henzinger MH, Lincoln A, Saha B. The complexity of average-case dynamic subgraph counting. In: 33rd Annual ACM-SIAM Symposium on Discrete Algorithms. Society for Industrial and Applied Mathematics; 2022:459-498. doi:10.1137/1.9781611977073.23
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2022 | Journal Article | IST-REx-ID: 12581 | OA
Zhong Y, Liu Q, Westoby M, et al. Intensified paraglacial slope failures due to accelerating downwasting of a temperate glacier in Mt. Gongga, southeastern Tibetan Plateau. Earth Surface Dynamics. 2022;10(1):23-42. doi:10.5194/esurf-10-23-2022
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2022 | Journal Article | IST-REx-ID: 12574 | OA
Kneib M, Miles ES, Buri P, et al. Sub-seasonal variability of supraglacial ice cliff melt rates and associated processes from time-lapse photogrammetry. The Cryosphere. 2022;16(11):4701-4725. doi:10.5194/tc-16-4701-2022
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2022 | Conference Abstract | IST-REx-ID: 12894 | OA
Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. Where is the sweet spot? A procurement story of general purpose compute nodes. In: ASHPC22 - Austrian-Slovenian HPC Meeting 2022. EuroCC Austria c/o Universität Wien; 2022:7. doi:10.25365/phaidra.337
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2022 | Journal Article | IST-REx-ID: 10583 | OA
Struk S, Braem L, Matthys C, et al. Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density. Plant & Cell Physiology. 2022;63(1):104-119. doi:10.1093/pcp/pcab149
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2022 | Journal Article | IST-REx-ID: 10702 | OA
McCartney DL, Hillary RF, Conole ELS, Banos DT, Gadd DA, Walker RM, Nangle C, Flaig R, Campbell A, Murray AD, Maniega SM, Valdés-Hernández MDC, Harris MA, Bastin ME, Wardlaw JM, Harris SE, Porteous DJ, Tucker-Drob EM, McIntosh AM, Evans KL, Deary IJ, Cox SR, Robinson MR, Marioni RE. 2022. Blood-based epigenome-wide analyses of cognitive abilities. Genome Biology. 23(1), 26.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 10714 | OA
Martin ET, Blatt P, Ngyuen E, et al. A translation control module coordinates germline stem cell differentiation with ribosome biogenesis during Drosophila oogenesis. Developmental Cell. 2022;57(7):883-900.e10. doi:10.1016/j.devcel.2022.03.005
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2022 | Journal Article | IST-REx-ID: 10731 | OA
Svoboda J, Tkadlec J, Pavlogiannis A, Chatterjee K, Nowak MA. Infection dynamics of COVID-19 virus under lockdown and reopening. Scientific Reports. 2022;12(1). doi:10.1038/s41598-022-05333-5
[Published Version] View | Files available | DOI | WoS | arXiv
 

2022 | Journal Article | IST-REx-ID: 10812
Römhild R, Bollenbach MT, Andersson DI. The physiology and genetics of bacterial responses to antibiotic combinations. Nature Reviews Microbiology. 2022;20:478-490. doi:10.1038/s41579-022-00700-5
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2022 | Journal Article | IST-REx-ID: 10841 | OA
Dahhan D, Reynolds G, Cárdenas J, et al. Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components. Plant Cell. 2022;34(6):2150-2173. doi:10.1093/plcell/koac071
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2022 | Journal Article | IST-REx-ID: 10926 | OA
Perini S, Butlin R, Westram AM, Johannesson K. Very short mountings are enough for sperm transfer in Littorina saxatilis. Journal of Molluscan Studies. 2022;88(1). doi:10.1093/mollus/eyab049
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2022 | Journal Article | IST-REx-ID: 11341 | OA
Lukacisin M, Espinosa-Cantú A, Bollenbach MT. Intron-mediated induction of phenotypic heterogeneity. Nature. 2022;605:113-118. doi:10.1038/s41586-022-04633-0
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2022 | Conference Paper | IST-REx-ID: 11181 | OA
Brown TA, Sigouin W, Alistarh D-A. PathCAS: An efficient middle ground for concurrent search data structures. In: Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming. Association for Computing Machinery; 2022:385-399. doi:10.1145/3503221.3508410
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2022 | Journal Article | IST-REx-ID: 11343 | OA
Aguilera E, Clerc MG, Zambra V. Vortices nucleation by inherent fluctuations in nematic liquid crystal cells. Nonlinear Dynamics. 2022;108:3209-3218. doi:10.1007/s11071-022-07396-5
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 11401 | OA
Nguyen VQ, Trinh TL, Chang C, et al. Unidentified major p-type source in SnSe: Multivacancies. NPG Asia Materials. 2022;14. doi:10.1038/s41427-022-00393-5
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2022 | Journal Article | IST-REx-ID: 12173 | OA
Baumgartner M, Zirnbauer R, Schlager S, et al. Atypical enteropathogenic E. coli are associated with disease activity in ulcerative colitis. Gut Microbes. 2022;14(1). doi:10.1080/19490976.2022.2143218
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2022 | Journal Article | IST-REx-ID: 12212 | OA
Martín-Belmonte A, Aguado C, Alfaro-Ruiz R, et al. Nanoscale alterations in GABAB receptors and GIRK channel organization on the hippocampus of APP/PS1 mice. Alzheimer’s Research & Therapy. 2022;14. doi:10.1186/s13195-022-01078-5
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2022 | Journal Article | IST-REx-ID: 12245 | OA
Soto X, Burton J, Manning CS, et al. Sequential and additive expression of miR-9 precursors control timing of neurogenesis. Development. 2022;149(19). doi:10.1242/dev.200474
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2022 | Journal Article | IST-REx-ID: 12252 | OA
Dormeshkin D, Shapira M, Dubovik S, et al. Isolation of an escape-resistant SARS-CoV-2 neutralizing nanobody from a novel synthetic nanobody library. Frontiers in Immunology. 2022;13. doi:10.3389/fimmu.2022.965446
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2022 | Journal Article | IST-REx-ID: 12262 | OA
Prattes M, Grishkovskaya I, Hodirnau V-V, et al. Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1. Nature Structural & Molecular Biology. 2022;29(9):942-953. doi:10.1038/s41594-022-00832-5
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2022 | Journal Article | IST-REx-ID: 11489 | OA
Bilanovičová V, Rýdza N, Koczka L, et al. The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein. International Journal of Molecular Sciences. 2022;23(11):6352. doi:10.3390/ijms23116352
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2022 | Journal Article | IST-REx-ID: 13451 | OA
Gull M, Weisz DR, Senchyna P, et al. A panchromatic study of massive stars in the extremely metal-poor local group dwarf galaxy Leo A. The Astrophysical Journal. 2022;941(2). doi:10.3847/1538-4357/aca295
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2022 | Journal Article | IST-REx-ID: 13993 | OA
Gong X, Jordan I, Huppert M, et al. Attosecond photoionization dynamics: from molecules over clusters to the liquid phase. Chimia. 2022;76(6):520-528. doi:10.2533/chimia.2022.520
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2022 | Journal Article | IST-REx-ID: 12246 | OA
Lewin M, Lieb EH, Seiringer R. Improved Lieb–Oxford bound on the indirect and exchange energies. Letters in Mathematical Physics. 2022;112(5). doi:10.1007/s11005-022-01584-5
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2022 | Journal Article | IST-REx-ID: 14355 | OA
Cali E, Lin S-J, Rocca C, Sahin Y, Al Shamsi A, El Chehadeh S, Chaabouni M, Mankad K, Galanaki E, Efthymiou S, Sudhakar S, Athanasiou-Fragkouli A, Celik T, Narli N, Bianca S, Murphy D, Moreira FMDC, Accogli A, Petree C, Huang K, Monastiri K, Edizadeh M, Nardello R, Ognibene M, De Marco P, Ruggieri M, Zara F, Striano P, Sahin Y, Al-Gazali L, Warde MTA, Gerard B, Zifarelli G, Beetz C, Fortuna S, Soler M, Valente EM, Varshney G, Maroofian R, Salpietro V, Houlden H, Grp SynS. 2022. A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease. Genetics in Medicine. 24(10), 2194–2203.
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2022 | Journal Article | IST-REx-ID: 12776 | OA
Browning TD. Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5. New York Journal of Mathematics. 2022;28:1193-1229.
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2022 | Thesis | IST-REx-ID: 10759 | OA
Rzadkowski W. Analytic and machine learning approaches to composite quantum impurities. 2022. doi:10.15479/at:ista:10759
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2022 | Journal Article | IST-REx-ID: 15205 | OA
Taverna R, Turolla R, Muleri F, Heyl J, Zane S, Baldini L, González-Caniulef D, Bachetti M, Rankin J, Caiazzo I, Di Lalla N, Doroshenko V, Errando M, Gau E, Kırmızıbayrak D, Krawczynski H, Negro M, Ng M, Omodei N, Possenti A, Tamagawa T, Uchiyama K, Weisskopf MC, Agudo I, Antonelli LA, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, De Rosa A, Del Monte E, Di Gesu L, Di Marco A, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, La Monaca F, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng SC-Y, O’Dell SL, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Poutanen J, Puccetti S, Ramsey BD, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tavecchio F, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Tsygankov SS, Vink J, Wu K, Xie F. 2022. Polarized x-rays from a magnetar. Science. 378(6620), 646–650.
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2022 | Journal Article | IST-REx-ID: 15204 | OA
Doroshenko V, Poutanen J, Tsygankov SS, Suleimanov VF, Bachetti M, Caiazzo I, Costa E, Di Marco A, Heyl J, La Monaca F, Muleri F, Mushtukov AA, Pavlov GG, Ramsey BD, Rankin J, Santangelo A, Soffitta P, Staubert R, Weisskopf MC, Zane S, Agudo I, Antonelli LA, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, De Rosa A, Del Monte E, Di Gesu L, Di Lalla N, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Possenti A, Puccetti S, Ratheesh A, Romani RW, Sgrò C, Slane P, Spandre G, Sunyaev RA, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Turolla R, Vink J, Wu K, Xie F. 2022. Determination of X-ray pulsar geometry with IXPE polarimetry. Nature Astronomy. 6(12), 1433–1443.
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2022 | Journal Article | IST-REx-ID: 15208 | OA
Caiazzo I, González-Caniulef D, Heyl J, Fernández R. Probing magnetar emission mechanisms with X-ray spectropolarimetry. Monthly Notices of the Royal Astronomical Society. 2022;514(4):5024-5034. doi:10.1093/mnras/stac1571
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2022 | Preprint | IST-REx-ID: 11943 | OA
Velicky P, Miguel Villalba E, Michalska JM, et al. Saturated reconstruction of living brain tissue. bioRxiv. doi:10.1101/2022.03.16.484431
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2021 | Conference Paper | IST-REx-ID: 10054 | OA
Chatterjee K, Henzinger MH, Kale SS, Svozil A. Faster algorithms for bounded liveness in graphs and game graphs. In: 48th International Colloquium on Automata, Languages, and Programming. Vol 198. Schloss Dagstuhl - Leibniz Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.ICALP.2021.124
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2021 | Conference Paper | IST-REx-ID: 10072 | OA
Harris DG, Iliopoulos F, Kolmogorov V. A new notion of commutativity for the algorithmic Lovász Local Lemma. In: Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques. Vol 207. Schloss Dagstuhl - Leibniz Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.APPROX/RANDOM.2021.31
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10218 | OA
Alistarh D-A, Gelashvili R, Rybicki J. Brief announcement: Fast graphical population protocols. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.43
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10217 | OA
Alistarh D-A, Gelashvili R, Nadiradze G. Lower bounds for shared-memory leader election under bounded write contention. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.4
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2021 | Conference Paper | IST-REx-ID: 10216 | OA
Chatterjee B, Peri S, Sa M. Brief announcement: Non-blocking dynamic unbounded graphs with worst-case amortized bounds. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.52
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10219 | OA
Korhonen J, Paz A, Rybicki J, Schmid S, Suomela J. Brief announcement: Sinkless orientation is hard also in the supported LOCAL model. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.58
[Published Version] View | Files available | DOI | arXiv
 

2021 | Book Chapter | IST-REx-ID: 10267
Zhang Y, Li L, Friml J. Evaluation of gravitropism in non-seed plants. In: Blancaflor EB, ed. Plant Gravitropism. Vol 2368. MIMB. Springer Nature; 2021:43-51. doi:10.1007/978-1-0716-1677-2_2
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2021 | Conference Paper | IST-REx-ID: 10688 | OA
Kragl B, Qadeer S. The Civl verifier. In: Ruzica P, Whalen MW, eds. Proceedings of the 21st Conference on Formal Methods in Computer-Aided Design. Vol 2. TU Wien Academic Press; 2021:143–152. doi:10.34727/2021/isbn.978-3-85448-046-4_23
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2021 | Conference Paper | IST-REx-ID: 10694 | OA
Avni G, Jecker IR, Zikelic D. Infinite-duration all-pay bidding games. In: Marx D, ed. Proceedings of the 2021 ACM-SIAM Symposium on Discrete Algorithms. Society for Industrial and Applied Mathematics; 2021:617-636. doi:10.1137/1.9781611976465.38
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2021 | Journal Article | IST-REx-ID: 11500 | OA
Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely Deep Field: The cosmic web in emission at high redshift. Astronomy & Astrophysics. 647, A107.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11525 | OA
Gallego SG, Cantalupo S, Sarpas S, et al. Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations. Monthly Notices of the Royal Astronomical Society. 2021;504(1):16-32. doi:10.1093/mnras/stab796
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11663 | OA
Bernstein A, Forster S, Henzinger MH. A deamortization approach for dynamic spanner and dynamic maximal matching. ACM Transactions on Algorithms. 2021;17(4). doi:10.1145/3469833
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Conference Paper | IST-REx-ID: 11919 | OA
Bergamaschi T, Henzinger MH, Gutenberg MP, Williams VV, Wein N. New techniques and fine-grained hardness for dynamic near-additive spanners. In: 32nd Annual ACM-SIAM Symposium on Discrete Algorithms. Society for Industrial and Applied Mathematics; 2021:1836-1855. doi:10.1137/1.9781611976465.110
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