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506 Publications


2022 | Journal Article | IST-REx-ID: 10583 | OA
Struk S, Braem L, Matthys C, Walton A, Vangheluwe N, Van Praet S, Jiang L, Baster P, De Cuyper C, Boyer F-D, Stes E, Beeckman T, Friml J, Gevaert K, Goormachtig S. 2022. Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density. Plant & Cell Physiology. 63(1), 104–119.
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2022 | Journal Article | IST-REx-ID: 10702 | OA
McCartney DL, Hillary RF, Conole ELS, Banos DT, Gadd DA, Walker RM, Nangle C, Flaig R, Campbell A, Murray AD, Maniega SM, Valdés-Hernández MDC, Harris MA, Bastin ME, Wardlaw JM, Harris SE, Porteous DJ, Tucker-Drob EM, McIntosh AM, Evans KL, Deary IJ, Cox SR, Robinson MR, Marioni RE. 2022. Blood-based epigenome-wide analyses of cognitive abilities. Genome Biology. 23(1), 26.
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2022 | Journal Article | IST-REx-ID: 10714 | OA
Martin ET, Blatt P, Ngyuen E, Lahr R, Selvam S, Yoon HAM, Pocchiari T, Emtenani S, Siekhaus DE, Berman A, Fuchs G, Rangan P. 2022. A translation control module coordinates germline stem cell differentiation with ribosome biogenesis during Drosophila oogenesis. Developmental Cell. 57(7), 883–900.e10.
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2022 | Journal Article | IST-REx-ID: 10731 | OA
Svoboda J, Tkadlec J, Pavlogiannis A, Chatterjee K, Nowak MA. 2022. Infection dynamics of COVID-19 virus under lockdown and reopening. Scientific Reports. 12(1), 1526.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2022 | Journal Article | IST-REx-ID: 10812
Römhild R, Bollenbach MT, Andersson DI. 2022. The physiology and genetics of bacterial responses to antibiotic combinations. Nature Reviews Microbiology. 20, 478–490.
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2022 | Journal Article | IST-REx-ID: 10841 | OA
Dahhan D, Reynolds G, Cárdenas J, Eeckhout D, Johnson AJ, Yperman K, Kaufmann W, Vang N, Yan X, Hwang I, Heese A, De Jaeger G, Friml J, Van Damme D, Pan J, Bednarek S. 2022. Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components. Plant Cell. 34(6), 2150–2173.
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2022 | Journal Article | IST-REx-ID: 10926 | OA
Perini S, Butlin R, Westram AM, Johannesson K. 2022. Very short mountings are enough for sperm transfer in Littorina saxatilis. Journal of Molluscan Studies. 88(1), eyab049.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

2022 | Journal Article | IST-REx-ID: 11341 | OA
Lukacisin M, Espinosa-Cantú A, Bollenbach MT. 2022. Intron-mediated induction of phenotypic heterogeneity. Nature. 605, 113–118.
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2022 | Conference Paper | IST-REx-ID: 11181 | OA
Brown TA, Sigouin W, Alistarh D-A. 2022. PathCAS: An efficient middle ground for concurrent search data structures. Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming. PPoPP: Sympopsium on Principles and Practice of Parallel Programming, 385–399.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 11343 | OA
Aguilera E, Clerc MG, Zambra V. 2022. Vortices nucleation by inherent fluctuations in nematic liquid crystal cells. Nonlinear Dynamics. 108, 3209–3218.
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2022 | Journal Article | IST-REx-ID: 11401 | OA
Nguyen VQ, Trinh TL, Chang C, Zhao LD, Nguyen TH, Duong VT, Duong AT, Park JH, Park S, Kim J, Cho S. 2022. Unidentified major p-type source in SnSe: Multivacancies. NPG Asia Materials. 14, 42.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12173 | OA
Baumgartner M, Zirnbauer R, Schlager S, Mertens D, Gasche N, Sladek B, Herbold C, Bochkareva O, Emelianenko V, Vogelsang H, Lang M, Klotz A, Moik B, Makristathis A, Berry D, Dabsch S, Khare V, Gasche C. 2022. Atypical enteropathogenic E. coli are associated with disease activity in ulcerative colitis. Gut Microbes. 14(1), e2143218.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12212 | OA
Martín-Belmonte A, Aguado C, Alfaro-Ruiz R, Moreno-Martínez AE, de la Ossa L, Aso E, Gómez-Acero L, Shigemoto R, Fukazawa Y, Ciruela F, Luján R. 2022. Nanoscale alterations in GABAB receptors and GIRK channel organization on the hippocampus of APP/PS1 mice. Alzheimer’s Research & Therapy. 14, 136.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12245 | OA
Soto X, Burton J, Manning CS, Minchington T, Lea R, Lee J, Kursawe J, Rattray M, Papalopulu N. 2022. Sequential and additive expression of miR-9 precursors control timing of neurogenesis. Development. 149(19), dev200474.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 12252 | OA
Dormeshkin D, Shapira M, Dubovik S, Kavaleuski A, Katsin M, Migas A, Meleshko A, Semyonov S. 2022. Isolation of an escape-resistant SARS-CoV-2 neutralizing nanobody from a novel synthetic nanobody library. Frontiers in Immunology. 13, 965446.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12262 | OA
Prattes M, Grishkovskaya I, Hodirnau V-V, Hetzmannseder C, Zisser G, Sailer C, Kargas V, Loibl M, Gerhalter M, Kofler L, Warren AJ, Stengel F, Haselbach D, Bergler H. 2022. Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1. Nature Structural & Molecular Biology. 29(9), 942–953.
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2022 | Journal Article | IST-REx-ID: 11489 | OA
Bilanovičová V, Rýdza N, Koczka L, Hess M, Feraru E, Friml J, Nodzyński T. 2022. The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein. International Journal of Molecular Sciences. 23(11), 6352.
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2022 | Journal Article | IST-REx-ID: 13451 | OA
Gull M, Weisz DR, Senchyna P, Sandford NR, Choi Y, McLeod AF, El-Badry K, Götberg YLL, Gilbert KM, Boyer M, Dalcanton JJ, GuhaThakurta P, Goldman S, Marigo P, McQuinn KBW, Pastorelli G, Stark DP, Skillman E, Ting Y, Williams BF. 2022. A panchromatic study of massive stars in the extremely metal-poor local group dwarf galaxy Leo A. The Astrophysical Journal. 941(2), 206.
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2022 | Journal Article | IST-REx-ID: 13993 | OA
Gong X, Jordan I, Huppert M, Heck S, Baykusheva DR, Jelovina D, Schild A, Wörner HJ. 2022. Attosecond photoionization dynamics: from molecules over clusters to the liquid phase. Chimia. 76(6), 520–528.
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2022 | Journal Article | IST-REx-ID: 12246 | OA
Lewin M, Lieb EH, Seiringer R. 2022. Improved Lieb–Oxford bound on the indirect and exchange energies. Letters in Mathematical Physics. 112(5), 92.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2022 | Journal Article | IST-REx-ID: 14355 | OA
Cali E, Lin S-J, Rocca C, Sahin Y, Al Shamsi A, El Chehadeh S, Chaabouni M, Mankad K, Galanaki E, Efthymiou S, Sudhakar S, Athanasiou-Fragkouli A, Celik T, Narli N, Bianca S, Murphy D, Moreira FMDC, Accogli A, Petree C, Huang K, Monastiri K, Edizadeh M, Nardello R, Ognibene M, De Marco P, Ruggieri M, Zara F, Striano P, Sahin Y, Al-Gazali L, Warde MTA, Gerard B, Zifarelli G, Beetz C, Fortuna S, Soler M, Valente EM, Varshney G, Maroofian R, Salpietro V, Houlden H, Grp SynS. 2022. A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease. Genetics in Medicine. 24(10), 2194–2203.
[Published Version] View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 12776 | OA
Browning TD. 2022. Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5. New York Journal of Mathematics. 28, 1193–1229.
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2022 | Thesis | IST-REx-ID: 10759 | OA
Rzadkowski W. 2022. Analytic and machine learning approaches to composite quantum impurities. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 15205 | OA
Taverna R, Turolla R, Muleri F, Heyl J, Zane S, Baldini L, González-Caniulef D, Bachetti M, Rankin J, Caiazzo I, Di Lalla N, Doroshenko V, Errando M, Gau E, Kırmızıbayrak D, Krawczynski H, Negro M, Ng M, Omodei N, Possenti A, Tamagawa T, Uchiyama K, Weisskopf MC, Agudo I, Antonelli LA, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, De Rosa A, Del Monte E, Di Gesu L, Di Marco A, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, La Monaca F, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng SC-Y, O’Dell SL, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Poutanen J, Puccetti S, Ramsey BD, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tavecchio F, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Tsygankov SS, Vink J, Wu K, Xie F. 2022. Polarized x-rays from a magnetar. Science. 378(6620), 646–650.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 15204 | OA
Doroshenko V, Poutanen J, Tsygankov SS, Suleimanov VF, Bachetti M, Caiazzo I, Costa E, Di Marco A, Heyl J, La Monaca F, Muleri F, Mushtukov AA, Pavlov GG, Ramsey BD, Rankin J, Santangelo A, Soffitta P, Staubert R, Weisskopf MC, Zane S, Agudo I, Antonelli LA, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, De Rosa A, Del Monte E, Di Gesu L, Di Lalla N, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Possenti A, Puccetti S, Ratheesh A, Romani RW, Sgrò C, Slane P, Spandre G, Sunyaev RA, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Turolla R, Vink J, Wu K, Xie F. 2022. Determination of X-ray pulsar geometry with IXPE polarimetry. Nature Astronomy. 6(12), 1433–1443.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 15208 | OA
Caiazzo I, González-Caniulef D, Heyl J, Fernández R. 2022. Probing magnetar emission mechanisms with X-ray spectropolarimetry. Monthly Notices of the Royal Astronomical Society. 514(4), 5024–5034.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2022 | Preprint | IST-REx-ID: 11943 | OA
Velicky P, Miguel Villalba E, Michalska JM, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. Saturated reconstruction of living brain tissue. bioRxiv, 10.1101/2022.03.16.484431.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 

2021 | Conference Paper | IST-REx-ID: 10054 | OA
Chatterjee K, Henzinger MH, Kale SS, Svozil A. 2021. Faster algorithms for bounded liveness in graphs and game graphs. 48th International Colloquium on Automata, Languages, and Programming. ICALP: International Colloquium on Automata, Languages, and Programming, LIPIcs, vol. 198, 124.
[Published Version] View | Files available | DOI
 

2021 | Conference Paper | IST-REx-ID: 10072 | OA
Harris DG, Iliopoulos F, Kolmogorov V. 2021. A new notion of commutativity for the algorithmic Lovász Local Lemma. Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques. APPROX/RANDOM: Approximation Algorithms for Combinatorial Optimization Problems/ Randomization and Computation, LIPIcs, vol. 207, 31.
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10218 | OA
Alistarh D-A, Gelashvili R, Rybicki J. 2021. Brief announcement: Fast graphical population protocols. 35th International Symposium on Distributed Computing. DISC: Distributed Computing , LIPIcs, vol. 209, 43.
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10217 | OA
Alistarh D-A, Gelashvili R, Nadiradze G. 2021. Lower bounds for shared-memory leader election under bounded write contention. 35th International Symposium on Distributed Computing. DISC: Distributed Computing, LIPIcs, vol. 209, 4.
[Published Version] View | Files available | DOI
 

2021 | Conference Paper | IST-REx-ID: 10216 | OA
Chatterjee B, Peri S, Sa M. 2021. Brief announcement: Non-blocking dynamic unbounded graphs with worst-case amortized bounds. 35th International Symposium on Distributed Computing. DISC: Distributed Computing, LIPIcs, vol. 209, 52.
[Published Version] View | Files available | DOI | arXiv
 

2021 | Conference Paper | IST-REx-ID: 10219 | OA
Korhonen J, Paz A, Rybicki J, Schmid S, Suomela J. 2021. Brief announcement: Sinkless orientation is hard also in the supported LOCAL model. 35th International Symposium on Distributed Computing. DISC: Distributed Computing , LIPIcs, vol. 209, 58.
[Published Version] View | Files available | DOI | arXiv
 

2021 | Book Chapter | IST-REx-ID: 10267
Zhang Y, Li L, Friml J. 2021.Evaluation of gravitropism in non-seed plants. In: Plant Gravitropism. Methods in Molecular Biology, vol. 2368, 43–51.
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2021 | Conference Paper | IST-REx-ID: 10688 | OA
Kragl B, Qadeer S. 2021. The Civl verifier. Proceedings of the 21st Conference on Formal Methods in Computer-Aided Design. FMCAD: Formal Methods in Computer-Aided Design, Conference Series, vol. 2, 143–152.
[Published Version] View | Files available | DOI
 

2021 | Conference Paper | IST-REx-ID: 10694 | OA
Avni G, Jecker IR, Zikelic D. 2021. Infinite-duration all-pay bidding games. Proceedings of the 2021 ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 617–636.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11500 | OA
Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely Deep Field: The cosmic web in emission at high redshift. Astronomy & Astrophysics. 647, A107.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11525 | OA
Gallego SG, Cantalupo S, Sarpas S, Duboeuf B, Lilly S, Pezzulli G, Marino RA, Matthee JJ, Wisotzki L, Schaye J, Richard J, Kusakabe H, Mauerhofer V. 2021. Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations. Monthly Notices of the Royal Astronomical Society. 504(1), 16–32.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11663 | OA
Bernstein A, Forster S, Henzinger MH. 2021. A deamortization approach for dynamic spanner and dynamic maximal matching. ACM Transactions on Algorithms. 17(4), 29.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Conference Paper | IST-REx-ID: 11919 | OA
Bergamaschi T, Henzinger MH, Gutenberg MP, Williams VV, Wein N. 2021. New techniques and fine-grained hardness for dynamic near-additive spanners. 32nd Annual ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 1836–1855.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Conference Paper | IST-REx-ID: 11923 | OA
Henzinger MH, Neumann S, Räcke H, Schmid S. 2021. Tight bounds for online graph partitioning. 32nd Annual ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 2799–2818.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Conference Paper | IST-REx-ID: 11920 | OA
Bhattacharya S, Henzinger MH, Nanongkai D, Wu X. 2021. Dynamic set cover: Improved amortized and worst-case update time. 32nd Annual ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 2537–2549.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Book Chapter | IST-REx-ID: 9245
Xia P, Heisenberg C-PJ. 2021.Quantifying tissue tension in the granulosa layer after laser surgery. In: Germline Development in the Zebrafish. Methods in Molecular Biology, vol. 2218, 117–128.
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2021 | Conference Paper | IST-REx-ID: 9604 | OA
Biswas R, Cultrera di Montesano S, Edelsbrunner H, Saghafian M. 2021. Counting cells of order-k voronoi tessellations in ℝ3 with morse theory. Leibniz International Proceedings in Informatics. SoCG: International Symposium on Computational Geometry, LIPIcs, vol. 189, 16.
[Published Version] View | Files available | DOI
 

2021 | Journal Article | IST-REx-ID: 12591 | OA
Ren S, Miles ES, Jia L, Menenti M, Kneib M, Buri P, McCarthy MJ, Shaw TE, Yang W, Pellicciotti F. 2021. Anisotropy parameterization development and evaluation for glacier surface albedo retrieval from satellite observations. Remote Sensing. 13(9), 1714.
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2021 | Journal Article | IST-REx-ID: 12587 | OA
Stewart RL, Westoby M, Pellicciotti F, Rowan A, Swift D, Brock B, Woodward J. 2021. Using climate reanalysis data in conjunction with multi-temporal satellite thermal imagery to derive supraglacial debris thickness changes from energy-balance modelling. Journal of Glaciology. 67(262), 366–384.
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2021 | Technical Report | IST-REx-ID: 6995 | OA
Samarasinghe RA, Miranda O, Buth JE, Mitchell S, Ferando I, Watanabe M, Kurdian A, Golshani P, Plath K, Lowry WE, Parent JM, Mody I, Novitch BG. 2021. Identification of neural oscillations and epileptiform changes in human brain organoids, Springer Nature, 32p.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9101 | OA
Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. 2021. Early life differences in behavioral predispositions in two Alligatoridae species. Animal Cognition. 24(4), 753–764.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9380 | OA
Seferbekova Z, Zabelkin A, Yakovleva Y, Afasizhev R, Dranenko NO, Alexeev N, Gelfand MS, Bochkareva O. 2021. High rates of genome rearrangements and pathogenicity of Shigella spp. Frontiers in Microbiology. 12, 628622.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9558 | OA
Yalniz G, Hof B, Budanur NB. 2021. Coarse graining the state space of a turbulent flow using periodic orbits. Physical Review Letters. 126(24), 244502.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

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