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4206 Publications


2013 | Journal Article | IST-REx-ID: 3261 | OA
Dubuis, J., Tkačik, G., Wieschaus, E., Gregor, T., & Bialek, W. (2013). Positional information, in bits. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.1315642110
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 2831 | OA
Chatterjee, K., Henzinger, M. H., Joglekar, M., & Shah, N. (2013). Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives. Formal Methods in System Design. Springer. https://doi.org/10.1007/s10703-012-0180-2
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 450 | OA
Pickup, M., Field, D., Rowell, D., & Young, A. (2013). Source population characteristics affect heterosis following genetic rescue of fragmented plant populations. Proceedings of the Royal Society of London Series B Biological Sciences. Royal Society, The. https://doi.org/10.1098/rspb.2012.2058
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2013 | Journal Article | IST-REx-ID: 476 | OA
Dickerson, D., & Bilkey, D. (2013). Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions. Frontiers in Behavioral Neuroscience. Frontiers Research Foundation. https://doi.org/10.3389/fnbeh.2013.00217
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 500 | OA
Ward, M., Lycett, S., Avila, D., Bollback, J. P., & Leigh Brown, A. (2013). Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza. BMC Evolutionary Biology. BioMed Central. https://doi.org/10.1186/1471-2148-13-222
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 501 | OA
Cozzuol, M., Clozato, C., Holanda, E., Rodrigues, F., Nienow, S., De Thoisy, B., … Santos, F. (2013). A new species of tapir from the Amazon. Journal of Mammalogy. Oxford University Press. https://doi.org/10.1644/12-MAMM-A-169.1
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 508 | OA
Tarazona Santos, E., Machado, M., Magalhães, W., Chen, R., Lyon, F., Burdett, L., … Chanock, S. (2013). Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications. Molecular Biology and Evolution. Oxford University Press. https://doi.org/10.1093/molbev/mst119
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2013 | Journal Article | IST-REx-ID: 509 | OA
Di Rubbo, S., Irani, N., Kim, S., Xu, Z., Gadeyne, A., Dejonghe, W., … Russinova, E. (2013). The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis. Plant Cell. American Society of Plant Biologists. https://doi.org/10.1105/tpc.113.114058
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2013 | Journal Article | IST-REx-ID: 507 | OA
Kim, S., Xu, Z., Song, K., Kim, D., Kang, H., Reichardt, I., … Hwang, I. (2013). Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis. Plant Cell. American Society of Plant Biologists. https://doi.org/10.1105/tpc.113.114264
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2013 | Journal Article | IST-REx-ID: 511 | OA
Pěnčík, A., Simonovik, B., Petersson, S., Henyková, E., Simon, S., Greenham, K., … Ljung, K. (2013). Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid. Plant Cell. American Society of Plant Biologists. https://doi.org/10.1105/tpc.113.114421
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2013 | Journal Article | IST-REx-ID: 516 | OA
Bargmann, B., Vanneste, S., Krouk, G., Nawy, T., Efroni, I., Shani, E., … Birnbaum, K. (2013). A map of cell type‐specific auxin responses. Molecular Systems Biology. Nature Publishing Group. https://doi.org/10.1038/msb.2013.40
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2013 | Conference Paper | IST-REx-ID: 2279 | OA
Chatterjee, K., Doyen, L., Randour, M., & Raskin, J. (2013). Looking at mean-payoff and total-payoff through windows. Presented at the ATVA: Automated Technology for Verification and Analysis, Hanoi, Vietnam: Springer. https://doi.org/10.1007/978-3-319-02444-8_10
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2013 | Technical Report | IST-REx-ID: 5399 | OA
Reiter, J., Bozic, I., Chatterjee, K., & Nowak, M. (2013). TTP: Tool for Tumor Progression. IST Austria. https://doi.org/10.15479/AT:IST-2013-104-v1-1
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2013 | Conference Paper | IST-REx-ID: 2295 | OA
Chatterjee, K., Chmelik, M., & Tracol, M. (2013). What is decidable about partially observable Markov decision processes with omega-regular objectives. Presented at the CSL: Computer Science Logic, Torino, Italy: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.CSL.2013.165
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5403 | OA
Chatterjee, K., & Ibsen-Jensen, R. (2013). Qualitative analysis of concurrent mean-payoff games. IST Austria. https://doi.org/10.15479/AT:IST-2013-126-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5402 | OA
Henzinger, T. A., & Sezgin, A. (2013). How free is your linearizable concurrent data structure? IST Austria. https://doi.org/10.15479/AT:IST-2013-123-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5400 | OA
Chatterjee, K., Chmelik, M., & Tracol, M. (2013). What is decidable about partially observable Markov decision processes with ω-regular objectives. IST Austria. https://doi.org/10.15479/AT:IST-2013-109-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5404 | OA
Chatterjee, K., & Ibsen-Jensen, R. (2013). The complexity of ergodic games. IST Austria. https://doi.org/10.15479/AT:IST-2013-127-v1-1
[Published Version] View | Files available | DOI
 

2013 | Report | IST-REx-ID: 5401 | OA
Porsche, J. (2013). Initiatives and projects related to RD. IST Austria.
[Published Version] View | Files available
 

2013 | Technical Report | IST-REx-ID: 5405 | OA
Chatterjee, K., Doyen, L., Gimbert, H., & Oualhadj, Y. (2013). Perfect-information stochastic mean-payoff parity games. IST Austria. https://doi.org/10.15479/AT:IST-2013-128-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5409 | OA
Chatterjee, K., Ibsen-Jensen, R., & Majumdar, R. (2013). Edit distance for timed automata. IST Austria. https://doi.org/10.15479/AT:IST-2013-144-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5406 | OA
Chatterjee, K., Henzinger, T. A., Otop, J., & Pavlogiannis, A. (2013). Distributed synthesis for LTL Fragments. IST Austria. https://doi.org/10.15479/AT:IST-2013-130-v1-1
[Published Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 5408 | OA
Chatterjee, K., Doyen, L., Nain, S., & Vardi, M. (2013). The complexity of partial-observation stochastic parity games with finite-memory strategies. IST Austria. https://doi.org/10.15479/AT:IST-2013-141-v1-1
[Published Version] View | Files available | DOI
 

2013 | Report | IST-REx-ID: 5407 | OA
Porsche, J. (2013). Technical requirements and features. IST Austria.
[Published Version] View | Files available
 

2013 | Technical Report | IST-REx-ID: 5410 | OA
Ahmed, U., Chatterjee, K., & Gulwani, S. (2013). Automatic generation of alternative starting positions for traditional board games. IST Austria. https://doi.org/10.15479/AT:IST-2013-146-v1-1
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2327 | OA
Henzinger, T. A., & Otop, J. (2013). From model checking to model measuring. Presented at the CONCUR: Concurrency Theory, Buenos Aires, Argentina: Springer. https://doi.org/10.1007/978-3-642-40184-8_20
[Submitted Version] View | Files available | DOI
 

2013 | Technical Report | IST-REx-ID: 6440 | OA
Henzinger, T. A., Payer, H., & Sezgin, A. (2013). Replacing competition with cooperation to achieve scalable lock-free FIFO queues . IST Austria. https://doi.org/10.15479/AT:IST-2013-124-v1-1
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2329 | OA
Chatterjee, K., & Velner, Y. (2013). Hyperplane separation technique for multidimensional mean-payoff games. Presented at the CONCUR: Concurrency Theory, Buenos Aires, Argentinia: Springer. https://doi.org/10.1007/978-3-642-40184-8_35
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 827 | OA
O’Brien, J., & Benková, E. (2013). Cytokinin cross talking during biotic and abiotic stress responses. Frontiers in Plant Science. Frontiers Research Foundation. https://doi.org/10.3389/fpls.2013.00451
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 828 | OA
Cuesta, C., Wabnik, K. T., & Benková, E. (2013). Systems approaches to study root architecture dynamics. Frontiers in Plant Science. Frontiers Research Foundation. https://doi.org/10.3389/fpls.2013.00537
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2284 | OA
Tragust, S., Ugelvig, L. V., Chapuisat, M., Heinze, J., & Cremer, S. (2013). Pupal cocoons affect sanitary brood care and limit fungal infections in ant colonies. BMC Evolutionary Biology. BioMed Central. https://doi.org/10.1186/1471-2148-13-225
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2277 | OA
Simmons, K., Prentice, J., Tkačik, G., Homann, J., Yee, H., Palmer, S., … Balasubramanian, V. (2013). Transformation of stimulus correlations by the retina. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1003344
[Published Version] View | Files available | DOI
 

2013 | Research Data Reference | IST-REx-ID: 9754 | OA
Hearn, J., Stone, G., Barton, N. H., Lohse, K., & Bunnefeld, L. (2013). Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies. Dryad. https://doi.org/10.5061/dryad.r3r60
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2013 | Journal Article | IST-REx-ID: 2914 | OA
Stephens, G., Mora, T., Tkačik, G., & Bialek, W. (2013). Statistical thermodynamics of natural images. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.110.018701
[Published Version] View | Files available | DOI | arXiv
 

2013 | Book Chapter | IST-REx-ID: 5747 | OA
Dragoi, C., Gupta, A., & Henzinger, T. A. (2013). Automatic Linearizability Proofs of Concurrent Objects with Cooperating Updates. In Computer Aided Verification (Vol. 8044, pp. 174–190). Berlin, Heidelberg: Springer Berlin Heidelberg. https://doi.org/10.1007/978-3-642-39799-8_11
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2013 | Thesis | IST-REx-ID: 1405 | OA
Zufferey, D. (2013). Analysis of dynamic message passing programs. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:1405
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2013 | Conference Paper | IST-REx-ID: 2847 | OA
Bansal, K., Koskinen, E., Wies, T., & Zufferey, D. (2013). Structural Counter Abstraction. (N. Piterman & S. Smolka, Eds.). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Rome, Italy: Springer. https://doi.org/10.1007/978-3-642-36742-7_5
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2013 | Journal Article | IST-REx-ID: 2247 | OA
Zagorsky, B., Reiter, J., Chatterjee, K., & Nowak, M. (2013). Forgiver triumphs in alternating prisoner’s dilemma . PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0080814
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2858 | OA
Reiter, J., Božić, I., Allen, B., Chatterjee, K., & Nowak, M. (2013). The effect of one additional driver mutation on tumor progression. Evolutionary Applications. Wiley-Blackwell. https://doi.org/10.1111/eva.12020
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2816 | OA
Božić, I., Reiter, J., Allen, B., Antal, T., Chatterjee, K., Shah, P., … Nowak, M. (2013). Evolutionary dynamics of cancer in response to targeted combination therapy. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.00747
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2000 | OA
Reiter, J., Božić, I., Chatterjee, K., & Nowak, M. (2013). TTP: Tool for tumor progression. In Proceedings of 25th Int. Conf. on Computer Aided Verification (Vol. 8044, pp. 101–106). St. Petersburg, Russia: Springer. https://doi.org/10.1007/978-3-642-39799-8_6
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Conference Paper | IST-REx-ID: 2445 | OA
Cerny, P., Henzinger, T. A., Radhakrishna, A., Ryzhyk, L., & Tarrach, T. (2013). Efficient synthesis for concurrency by semantics-preserving transformations (Vol. 8044, pp. 951–967). Presented at the CAV: Computer Aided Verification, St. Petersburg, Russia: Springer. https://doi.org/10.1007/978-3-642-39799-8_68
[Submitted Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2305 | OA
Brázdil, T., Chatterjee, K., Forejt, V., & Kučera, A. (2013). Trading performance for stability in Markov decision processes. In 28th Annual ACM/IEEE Symposium (pp. 331–340). New Orleans, LA, United States: IEEE. https://doi.org/10.1109/LICS.2013.39
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Conference Paper | IST-REx-ID: 2272 | OA
Takhanov, R., & Kolmogorov, V. (2013). Inference algorithms for pattern-based CRFs on sequence data. In ICML’13 Proceedings of the 30th International Conference on International (Vol. 28, pp. 145–153). Atlanta, GA, USA: ML Research Press.
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2013 | Journal Article | IST-REx-ID: 2448 | OA
Remy, E., Baster, P., Friml, J., & Duque, P. (2013). ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip. Plant Signaling & Behavior. Taylor & Francis. https://doi.org/10.4161/psb.25688
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2013 | Journal Article | IST-REx-ID: 2853 | OA
Refardt, D., Bergmiller, T., & Kümmerli, R. (2013). Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection. Proceedings of the Royal Society of London Series B Biological Sciences. The Royal Society. https://doi.org/10.1098/rspb.2012.3035
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2013 | Research Data Reference | IST-REx-ID: 9751 | OA
Refardt, D., Bergmiller, T., & Kümmerli, R. (2013). Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection. Dryad. https://doi.org/10.5061/dryad.b1q2n
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2013 | Report | IST-REx-ID: 2274 | OA
Dziembowski, S., Faust, S., Kolmogorov, V., & Pietrzak, K. Z. (2013). Proofs of Space. IST Austria.
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2012 | Conference Paper | IST-REx-ID: 1384 | OA
Beyer, D., Henzinger, T. A., Keremoglu, M., & Wendler, P. (2012). Conditional model checking: A technique to pass information between verifiers. In Proceedings of the ACM SIGSOFT 20th International Symposium on the Foundations of Software Engineering. Cary, NC, USA: ACM. https://doi.org/10.1145/2393596.2393664
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2012 | Conference Paper | IST-REx-ID: 2048 | OA
Faust, S., Pietrzak, K. Z., & Schipper, J. (2012). Practical leakage-resilient symmetric cryptography. In Conference proceedings CHES 2012 (Vol. 7428, pp. 213–232). Leuven, Belgium: Springer. https://doi.org/10.1007/978-3-642-33027-8_13
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