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453 Publications

2024 | Journal Article | IST-REx-ID: 15119 |

Stochastic maximal Lp(Lq)-regularity for second order systems with periodic boundary conditions
A. Agresti, M. Veraar, Annales de l’institut Henri Poincare Probability and Statistics 60 (2024) 413–430.

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2024 | Conference Paper | IST-REx-ID: 15093 |

Dynamically maintaining the persistent homology of time series
S. Cultrera di Montesano, H. Edelsbrunner, M.H. Henzinger, L. Ost, in:, D.P. Woodruff (Ed.), Proceedings of the 2024 Annual ACM-SIAM Symposium on Discrete Algorithms (SODA), Society for Industrial and Applied Mathematics, 2024, pp. 243–295.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2024 | Journal Article | IST-REx-ID: 15169

kCSD-python, reliable current source density estimation with quality control
C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).

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2024 | Journal Article | IST-REx-ID: 15146 |

Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix
B. Zens, F. Fäßler, J. Hansen, R. Hauschild, J. Datler, V.-V. Hodirnau, V. Zheden, J.H. Alanko, M.K. Sixt, F.K. Schur, Journal of Cell Biology 223 (2024).

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Journal Article | IST-REx-ID: 15247 |

Odd-sunflowers
P. Frankl, J. Pach, D. Pálvölgyi, Journal of Combinatorial Theory, Series A 206 (2024).

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2024 | Journal Article | IST-REx-ID: 15322

Multiple charge carrier species as a possible cause for triboelectric cycles
J.C.A. Sobarzo Ponce, S.R. Waitukaitis, Physical Review E 109 (2024).

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2024 | Journal Article | IST-REx-ID: 15336 |

ALMA survey of a massive node of the Cosmic Web at z ∼ 3: I. Discovery of a large overdensity of CO emitters
A. Pensabene, S. Cantalupo, C. Cicone, R. Decarli, M. Galbiati, M. Ginolfi, S. De Beer, M. Fossati, M. Fumagalli, T. Lazeyras, G. Pezzulli, A. Travascio, W. Wang, J.J. Matthee, M.V. Maseda, Astronomy and Astrophysics 684 (2024).

[Published Version] View | Files available | DOI | arXiv

2023 | Journal Article | IST-REx-ID: 12668 |

Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat
L. Zhao, Y. Yang, J. Chen, X. Lin, H. Zhang, H. Wang, H. Wang, X. Bie, J. Jiang, X. Feng, X. Fu, X. Zhang, Z. Du, J. Xiao, Genome Biology 24 (2023).

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2023 | Journal Article | IST-REx-ID: 12920 |

Programmable photocatalytic activity of multicomponent covalent organic frameworks used as metallaphotocatalysts
M. Traxler, S. Reischauer, S. Vogl, J. Roeser, J. Rabeah, C. Penschke, P. Saalfrank, B. Pieber, A. Thomas, Chemistry – A European Journal 29 (2023).

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2023 | Journal Article | IST-REx-ID: 12469 |

Antiviral immune response reveals host-specific virus infections in natural ant populations
L. Viljakainen, M. Fürst, A.V. Grasse, J. Jurvansuu, J. Oh, L. Tolonen, T. Eder, T. Rattei, S. Cremer, Frontiers in Microbiology 14 (2023).

2023 | Conference Paper | IST-REx-ID: 12548 |

Visual analytics of mobility network changes observed using mobile phone data during COVID-19 pandemic
M. Forghani, C. Claramunt, F. Karimipour, G. Heiler, in:, 2022 IEEE International Conference on Data Mining Workshops, Institute of Electrical and Electronics Engineers, 2023.

[Submitted Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 12567 |

Single-molecule localization microscopy of presynaptic active zones in Drosophila melanogaster after rapid cryofixation
A. Mrestani, K. Lichter, A.L. Sirén, M. Heckmann, M.M. Paul, M. Pauli, International Journal of Molecular Sciences 24 (2023).

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2023 | Journal Article | IST-REx-ID: 12759 |

Validation of a stereological method for estimating particle size and density from 2D projections with high accuracy
J.S. Rothman, C. Borges Merjane, N. Holderith, P.M. Jonas, R. Angus Silver, PLoS ONE 18 (2023).

[Published Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 12758 |

Using AlphaFold to predict the impact of single mutations on protein stability and function
M.A. Pak, K.A. Markhieva, M.S. Novikova, D.S. Petrov, I.S. Vorobyev, E. Maksimova, F. Kondrashov, D.N. Ivankov, PLoS ONE 18 (2023).

[Published Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 12757 |

From the 'black box' to 'domino effect' mechanism: What have we learned from the structures of respiratory complex I
L.A. Sazanov, The Biochemical Journal 480 (2023) 319–333.

2023 | Journal Article | IST-REx-ID: 12818 |

Curvature induces active velocity waves in rotating spherical tissues
T. Brandstätter, D. Brückner, Y.L. Han, R. Alert, M. Guo, C.P. Broedersz, Nature Communications 14 (2023).

2023 | Journal Article | IST-REx-ID: 13033 |

Novel stereological method for estimation of cell counts in 3D collagen scaffolds
A. Zavadakova, L. Vistejnova, T. Belinova, F. Tichanek, D. Bilikova, P.R. Mouton, Scientific Reports 13 (2023).

[Published Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 13094 |

Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles
A. Azadbakht, B. Meadowcroft, T. Varkevisser, A. Šarić, D.J. Kraft, Nano Letters 23 (2023) 4267–4273.

2023 | Journal Article | IST-REx-ID: 13093 |

Engineering of thermoelectric composites based on silver selenide in aqueous solution and ambient temperature
B. Nan, M. Li, Y. Zhang, K. Xiao, K.H. Lim, C. Chang, X. Han, Y. Zuo, J. Li, J. Arbiol, J. Llorca, M. Ibáñez, A. Cabot, ACS Applied Electronic Materials (2023).

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2023 | Journal Article | IST-REx-ID: 13260 |

Selection on the fly: Short-term adaptation to an altered sexual selection regime in Drosophila pseudoobscura
C. de Castro Barbosa Rodrigues Barata, R.R. Snook, M.G. Ritchie, C. Kosiol, Genome Biology and Evolution 15 (2023).

2023 | Journal Article | IST-REx-ID: 13966 |

Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling
G. Bighin, Q.P. Ho, M. Lemeshko, T.V. Tscherbul, Physical Review B 108 (2023).

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2023 | Journal Article | IST-REx-ID: 12544 |

Computing the volume, surface area, mean, and Gaussian curvatures of molecules and their derivatives
P. Koehl, A. Akopyan, H. Edelsbrunner, Journal of Chemical Information and Modeling 63 (2023) 973–985.

2023 | Conference Paper | IST-REx-ID: 14241 |

Stealth shaper: Reflectivity optimization as surface stylization
K. Tojo, A. Shamir, B. Bickel, N. Umetani, in:, SIGGRAPH 2023 Conference Proceedings, Association for Computing Machinery, 2023.

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2023 | Journal Article | IST-REx-ID: 12707 |

Small deviation estimates for the largest eigenvalue of Wigner matrices
L. Erdös, Y. Xu, Bernoulli 29 (2023) 1063–1079.

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2023 | Journal Article | IST-REx-ID: 14404

Widening the use of 3D printing
D. Balazs, M. Ibáñez, Science 381 (2023) 1413–1414.

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2023 | Conference Paper | IST-REx-ID: 14428 |

Random oracle combiners: Breaking the concatenation barrier for collision-resistance
Y. Dodis, N. Ferguson, E. Goldin, P. Hall, K.Z. Pietrzak, in:, 43rd Annual International Cryptology Conference, Springer Nature, 2023, pp. 514–546.

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2023 | Journal Article | IST-REx-ID: 12761 |

Functional central limit theorems for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Annals of Applied Probability 33 (2023) 447–489.

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2023 | Journal Article | IST-REx-ID: 14446 |

Against the flow of time with multi-output models
J. Jakubík, M. Phuong, M. Chvosteková, A. Krakovská, Measurement Science Review 23 (2023) 175–183.

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2023 | Journal Article | IST-REx-ID: 14488 |

A deeper analysis of volumetric relightiable faces
P. Rao, B.R. Mallikarjun, G. Fox, T. Weyrich, B. Bickel, H. Pfister, W. Matusik, F. Zhan, A. Tewari, C. Theobalt, M. Elgharib, International Journal of Computer Vision (2023).

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2023 | Preprint | IST-REx-ID: 14294 |

Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies
Edman NI, Redler RL, Phal A, Schlichthaerle T, Srivatsan SR, Etemadi A, An S, Favor A, Ehnes D, Li Z, Praetorius FM, Gordon M, Yang W, Coventry B, Hicks DR, Cao L, Bethel N, Heine P, Murray AN, Gerben S, Carter L, Miranda M, Negahdari B, Lee S, Trapnell C, Stewart L, Ekiert DC, Schlessinger J, Shendure J, Bhabha G, Ruohola-Baker H, Baker D. Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies. bioRxiv, 10.1101/2023.03.14.532666.

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2023 | Journal Article | IST-REx-ID: 14517 |

Compact vacuum-gap transmon qubits: Selective and sensitive probes for superconductor surface losses
M. Zemlicka, E. Redchenko, M. Peruzzo, F. Hassani, A. Trioni, S. Barzanjeh, J.M. Fink, Physical Review Applied 20 (2023).

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2023 | Journal Article | IST-REx-ID: 13041 |

Triarylamines as catholytes in aqueous organic redox flow batteries
N.L. Farag, R.B. Jethwa, A.E. Beardmore, T. Insinna, C.A. O’Keefe, P.A.A. Klusener, C.P. Grey, D.S. Wright, ChemSusChem 16 (2023).

2023 | Journal Article | IST-REx-ID: 14543 |

Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders
Kaiyrzhanov R, Rad A, Lin S-J, Bertoli-Avella A, Kallemeijn WW, Godwin A, Zaki MS, Huang K, Lau T, Petree C, Efthymiou S, Ghayoor Karimiani E, Hempel M, Normand EA, Rudnik-Schöneborn S, Schatz UA, Baggelaar MP, Ilyas M, Sultan T, Alvi JR, Ganieva M, Fowler B, Aanicai R, Akay Tayfun G, Al Saman A, Alswaid A, Amiri N, Asilova N, Shotelersuk V, Yeetong P, Azam M, Babaei M, Bahrami Monajemi G, Mohammadi P, Samie S, Banu SH, Basto JP, Kortüm F, Bauer M, Bauer P, Beetz C, Garshasbi M, Hameed Issa A, Eyaid W, Ahmed H, Hashemi N, Hassanpour K, Herman I, Ibrohimov S, Abdul-Majeed BA, Imdad M, Isrofilov M, Kaiyal Q, Khan S, Kirmse B, Koster J, Lourenço CM, Mitani T, Moldovan O, Murphy D, Najafi M, Pehlivan D, Rocha ME, Salpietro V, Schmidts M, Shalata A, Mahroum M, Talbeya JK, Taylor RW, Vazquez D, Vetro A, Waterham HR, Zaman M, Schrader TA, Chung WK, Guerrini R, Lupski JR, Gleeson J, Suri M, Jamshidi Y, Bhatia KP, Vona B, Schrader M, Severino M, Guille M, Tate EW, Varshney GK, Houlden H, Maroofian R. 2023. Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders. Brain., awad380.

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2023 | Journal Article | IST-REx-ID: 14667 |

Functional CLT for non-Hermitian random matrices
L. Erdös, H.C. Ji, Annales de l’institut Henri Poincare (B) Probability and Statistics 59 (2023) 2083–2105.

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2023 | Conference Paper | IST-REx-ID: 12976 |

Learning deposition policies for fused multi-material 3D printing
K. Liao, T. Tricard, M. Piovarci, H.-P. Seidel, V. Babaei, in:, 2023 IEEE International Conference on Robotics and Automation, IEEE, 2023, pp. 12345–12352.

[Submitted Version] View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 13265 |

As-Continuous-As-Possible extrusion-based fabrication of surface models
F. Zhong, Y. Xu, H. Zhao, L. Lu, ACM Transactions on Graphics 42 (2023).

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2023 | Journal Article | IST-REx-ID: 14041 |

3D cell segregation geometry and dynamics are governed by tissue surface tension regulation
E. Méhes, E. Mones, M. Varga, Á. Zsigmond, B. Biri-Kovács, L. Nyitray, V. Barone, G. Krens, C.-P.J. Heisenberg, T. Vicsek, Communications Biology 6 (2023).

2023 | Journal Article | IST-REx-ID: 14421 |

Creation rate of Dirac particles at a point source
S.J. Henheik, R. Tumulka, Journal of Physics A: Mathematical and Theoretical 56 (2023).

[Published Version] View | Files available | DOI | WoS | arXiv

2023 | Journal Article | IST-REx-ID: 14434

A 3d‐4d‐5d high entropy alloy as a bifunctional oxygen catalyst for robust aqueous zinc–air batteries
R. He, L. Yang, Y. Zhang, D. Jiang, S. Lee, S. Horta, Z. Liang, X. Lu, A. Ostovari Moghaddam, J. Li, M. Ibáñez, Y. Xu, Y. Zhou, A. Cabot, Advanced Materials (2023).

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2023 | Journal Article | IST-REx-ID: 14464 |

Optimal embedded and enclosing isosceles triangles
Á. Ambrus, M. Csikós, G. Kiss, J. Pach, G. Somlai, International Journal of Foundations of Computer Science 34 (2023) 737–760.

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2023 | Conference Paper | IST-REx-ID: 14691 |

On the cost of post-compromise security in concurrent Continuous Group-Key Agreement
B. Auerbach, M. Cueto Noval, G. Pascual Perez, K.Z. Pietrzak, in:, 21st International Conference on Theory of Cryptography, Springer Nature, 2023, pp. 271–300.

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2023 | Journal Article | IST-REx-ID: 14750 |

Local laws for multiplication of random matrices
X. Ding, H.C. Ji, The Annals of Applied Probability 33 (2023) 2981–3009.

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2023 | Research Data | IST-REx-ID: 12817 |

Research data for the publication "Dense 4D nanoscale reconstruction of living brain tissue"
J.G. Danzl, (2023).

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 13267 |

Dense 4D nanoscale reconstruction of living brain tissue
P. Velicky, E. Miguel Villalba, J.M. Michalska, J. Lyudchik, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, Nature Methods 20 (2023) 1256–1265.

2023 | Journal Article | IST-REx-ID: 14770

LIONESS enables 4D nanoscale reconstruction of living brain tissue
J.G. Danzl, P. Velicky, Nature Methods 20 (2023) 1141–1142.

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2023 | Journal Article | IST-REx-ID: 14775 |

Convergence rate to the Tracy–Widom laws for the largest eigenvalue of sample covariance matrices
K. Schnelli, Y. Xu, The Annals of Applied Probability 33 (2023) 677–725.

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2023 | Conference Paper | IST-REx-ID: 14768 |

Deterministic clustering in high dimensional spaces: Sketches and approximation
V. Cohen-Addad, D. Saulpic, C. Schwiegelshohn, in:, 2023 IEEE 64th Annual Symposium on Foundations of Computer Science, IEEE, 2023, pp. 1105–1130.

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2023 | Journal Article | IST-REx-ID: 14788 |

Clathrin coats partially preassemble and subsequently bend during endocytosis
M. Mund, A. Tschanz, Y.-L. Wu, F.F. Frey, J.L. Mehl, M. Kaksonen, O. Avinoam, U.S. Schwarz, J. Ries, Journal of Cell Biology 222 (2023).

2023 | Conference Paper | IST-REx-ID: 14798 |

The effect of display capabilities on the gloss consistency between real and virtual objects
B. Chen, A. Jindal, M. Piovarci, C. Wang, H.P. Seidel, P. Didyk, K. Myszkowski, A. Serrano, R.K. Mantiuk, in:, Proceedings of the SIGGRAPH Asia 2023 Conference, Association for Computing Machinery, 2023.

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2023 | Book Chapter | IST-REx-ID: 14853

Mechanisms for the Self‐Organization of Tropical Deep Convection
J.O. Haerter, C.J. Muller, in:, S. Sullivan, C. Hoose (Eds.), Clouds and Their Climatic Impacts, Wiley, 2023, pp. 179–193.

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