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10717 Publications
2022 | Published | Journal Article | IST-REx-ID: 12257 |

Social balance on networks: Local minima and best-edge dynamics
K. Chatterjee, J. Svoboda, D. Zikelic, A. Pavlogiannis, J. Tkadlec, Physical Review E 106 (2022).
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K. Chatterjee, J. Svoboda, D. Zikelic, A. Pavlogiannis, J. Tkadlec, Physical Review E 106 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11938 |

On compatible matchings
O. Aichholzer, A.M. Arroyo Guevara, Z. Masárová, I. Parada, D. Perz, A. Pilz, J. Tkadlec, B. Vogtenhuber, Journal of Graph Algorithms and Applications 26 (2022) 225–240.
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O. Aichholzer, A.M. Arroyo Guevara, Z. Masárová, I. Parada, D. Perz, A. Pilz, J. Tkadlec, B. Vogtenhuber, Journal of Graph Algorithms and Applications 26 (2022) 225–240.
2022 | Published | Journal Article | IST-REx-ID: 11591 |

Long-distance distribution of qubit-qubit entanglement using Gaussian-correlated photonic beams
J. Agustí, Y. Minoguchi, J.M. Fink, P. Rabl, Physical Review A 105 (2022).
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J. Agustí, Y. Minoguchi, J.M. Fink, P. Rabl, Physical Review A 105 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10643 |

Adiabatic theorem in the thermodynamic limit: Systems with a gap in the bulk
S.J. Henheik, S. Teufel, Forum of Mathematics, Sigma 10 (2022).
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S.J. Henheik, S. Teufel, Forum of Mathematics, Sigma 10 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10845 |

Impurity with a resonance in the vicinity of the Fermi energy
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
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M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10600 |

Adiabatic theorem in the thermodynamic limit: Systems with a uniform gap
S.J. Henheik, S. Teufel, Journal of Mathematical Physics 63 (2022).
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S.J. Henheik, S. Teufel, Journal of Mathematical Physics 63 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12243 |

Directional extremal statistics for Ginibre eigenvalues
G. Cipolloni, L. Erdös, D.J. Schröder, Y. Xu, Journal of Mathematical Physics 63 (2022).
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G. Cipolloni, L. Erdös, D.J. Schröder, Y. Xu, Journal of Mathematical Physics 63 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12110 |

Interior-boundary conditions for the Dirac equation at point sources in three dimensions
S.J. Henheik, R. Tumulka, Journal of Mathematical Physics 63 (2022).
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S.J. Henheik, R. Tumulka, Journal of Mathematical Physics 63 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12148 |

Rank-uniform local law for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Forum of Mathematics, Sigma 10 (2022).
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G. Cipolloni, L. Erdös, D.J. Schröder, Forum of Mathematics, Sigma 10 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12290 |

Optimal multi-resolvent local laws for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Electronic Journal of Probability 27 (2022) 1–38.
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G. Cipolloni, L. Erdös, D.J. Schröder, Electronic Journal of Probability 27 (2022) 1–38.
2022 | Published | Journal Article | IST-REx-ID: 11341 |

Intron-mediated induction of phenotypic heterogeneity
M. Lukacisin, A. Espinosa-Cantú, M.T. Bollenbach, Nature 605 (2022) 113–118.
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M. Lukacisin, A. Espinosa-Cantú, M.T. Bollenbach, Nature 605 (2022) 113–118.
2022 | Published | Journal Article | IST-REx-ID: 10654 |

Phase transition to turbulence in spatially extended shear flows
L. Klotz, G.M. Lemoult, K. Avila, B. Hof, Physical Review Letters 128 (2022).
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L. Klotz, G.M. Lemoult, K. Avila, B. Hof, Physical Review Letters 128 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11489 |

The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein
V. Bilanovičová, N. Rýdza, L. Koczka, M. Hess, E. Feraru, J. Friml, T. Nodzyński, International Journal of Molecular Sciences 23 (2022) 6352.
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V. Bilanovičová, N. Rýdza, L. Koczka, M. Hess, E. Feraru, J. Friml, T. Nodzyński, International Journal of Molecular Sciences 23 (2022) 6352.
2022 | Published | Journal Article | IST-REx-ID: 12053 |

Strigolactones act downstream of gibberellins to regulate fiber cell elongation and cell wall thickness in cotton (Gossypium hirsutum)
Z. Tian, Y. Zhang, L. Zhu, B. Jiang, H. Wang, R. Gao, J. Friml, G. Xiao, The Plant Cell 34 (2022) 4816–4839.
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Z. Tian, Y. Zhang, L. Zhu, B. Jiang, H. Wang, R. Gao, J. Friml, G. Xiao, The Plant Cell 34 (2022) 4816–4839.
2022 | Published | Thesis | IST-REx-ID: 11362 |

Learning verifiable representations
M. Lechner, Learning Verifiable Representations, Institute of Science and Technology Austria, 2022.
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M. Lechner, Learning Verifiable Representations, Institute of Science and Technology Austria, 2022.
2022 | Published | Journal Article | IST-REx-ID: 10736 |

Predicting bacterial promoter function and evolution from random sequences
M. Lagator, S. Sarikas, M. Steinrück, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkačik, ELife 11 (2022).
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M. Lagator, S. Sarikas, M. Steinrück, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkačik, ELife 11 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11411 |

Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus
P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, Genetics 221 (2022).
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P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, Genetics 221 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12264 |

What is reproductive isolation?
A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1143–1164.
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A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1143–1164.
2022 | Published | Journal Article | IST-REx-ID: 12265 |

Reproductive isolation, speciation, and the value of disagreement: A reply to the commentaries on ‘What is reproductive isolation?’
A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1200–1205.
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A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1200–1205.
2022 | Research Data | IST-REx-ID: 11321 |

Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus
P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, (2022).
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P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, (2022).
2022 | Published | Journal Article | IST-REx-ID: 11553 |

The dynamics of complex box mappings
Clark, Trevor, The dynamics of complex box mappings. Arnold Mathematical Journal 8 (2). 2022
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Clark, Trevor, The dynamics of complex box mappings. Arnold Mathematical Journal 8 (2). 2022
2022 | Published | Journal Article | IST-REx-ID: 11717 |

Rigidity of Newton dynamics
K. Drach, D. Schleicher, Advances in Mathematics 408 (2022).
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K. Drach, D. Schleicher, Advances in Mathematics 408 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12145 |

On some invariants of Birkhoff billiards under conjugacy
E. Koudjinan, V. Kaloshin, Regular and Chaotic Dynamics 27 (2022) 525–537.
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E. Koudjinan, V. Kaloshin, Regular and Chaotic Dynamics 27 (2022) 525–537.
2022 | Published | Journal Article | IST-REx-ID: 10639 |

The Orthobunyavirus Germiston enters host cells from late endosomes
S. Windhaber, Q. Xin, Z.M. Uckeley, J. Koch, M. Obr, C. Garnier, C. Luengo-Guyonnot, M. Duboeuf, F.K. Schur, P.-Y. Lozach, Journal of Virology 96 (2022).
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S. Windhaber, Q. Xin, Z.M. Uckeley, J. Koch, M. Obr, C. Garnier, C. Luengo-Guyonnot, M. Duboeuf, F.K. Schur, P.-Y. Lozach, Journal of Virology 96 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11155 |

Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs
M. Obr, W.J.H. Hagen, R.A. Dick, L. Yu, A. Kotecha, F.K. Schur, Journal of Structural Biology 214 (2022).
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M. Obr, W.J.H. Hagen, R.A. Dick, L. Yu, A. Kotecha, F.K. Schur, Journal of Structural Biology 214 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11351 |

Cryo-electron tomography of the onion cell wall shows bimodally oriented cellulose fibers and reticulated homogalacturonan networks
W.J. Nicolas, F. Fäßler, P. Dutka, F.K. Schur, G. Jensen, E. Meyerowitz, Current Biology 32 (2022) P2375-2389.
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W.J. Nicolas, F. Fäßler, P. Dutka, F.K. Schur, G. Jensen, E. Meyerowitz, Current Biology 32 (2022) P2375-2389.
2022 | Published | Journal Article | IST-REx-ID: 12288 |

Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling
A.L. Sumser, M.A. Jösch, P.M. Jonas, Y. Ben Simon, ELife 11 (2022).
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A.L. Sumser, M.A. Jösch, P.M. Jonas, Y. Ben Simon, ELife 11 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11700 |

Gradient flow formulation of diffusion equations in the Wasserstein space over a metric graph
M. Erbar, D.L. Forkert, J. Maas, D. Mugnolo, Networks and Heterogeneous Media 17 (2022) 687–717.
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M. Erbar, D.L. Forkert, J. Maas, D. Mugnolo, Networks and Heterogeneous Media 17 (2022) 687–717.
2022 | Published | Journal Article | IST-REx-ID: 11354 |

The Dirichlet–Ferguson diffusion on the space of probability measures over a closed Riemannian manifold
L. Dello Schiavo, Annals of Probability 50 (2022) 591–648.
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L. Dello Schiavo, Annals of Probability 50 (2022) 591–648.
2022 | Published | Journal Article | IST-REx-ID: 12177 |

Effective contraction of Skinning maps
T. Cremaschi, L. Dello Schiavo, Proceedings of the American Mathematical Society, Series B 9 (2022) 445–459.
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T. Cremaschi, L. Dello Schiavo, Proceedings of the American Mathematical Society, Series B 9 (2022) 445–459.
2022 | Published | Journal Article | IST-REx-ID: 10588 |

Sobolev-to-Lipschitz property on QCD- spaces and applications
L. Dello Schiavo, K. Suzuki, Mathematische Annalen 384 (2022) 1815–1832.
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L. Dello Schiavo, K. Suzuki, Mathematische Annalen 384 (2022) 1815–1832.
2022 | Published | Conference Paper | IST-REx-ID: 11476 |

CoCoA: Concurrent continuous group key agreement
Alwen, Joël, CoCoA: Concurrent continuous group key agreement. Advances in Cryptology – EUROCRYPT 2022 13276. 2022
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Alwen, Joël, CoCoA: Concurrent continuous group key agreement. Advances in Cryptology – EUROCRYPT 2022 13276. 2022
2022 | Published | Journal Article | IST-REx-ID: 12108 |

Mechanochemical rules for shape-shifting filaments that remodel membranes
B. Meadowcroft, I. Palaia, A.K. Pfitzner, A. Roux, B. Baum, A. Šarić, Physical Review Letters 129 (2022).
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B. Meadowcroft, I. Palaia, A.K. Pfitzner, A. Roux, B. Baum, A. Šarić, Physical Review Letters 129 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11334 |

Parthenogenesis in Darevskia lizards: A rare outcome of common hybridization, not a common outcome of rare hybridization
S. Freitas, A.M. Westram, T. Schwander, M. Arakelyan, Ç. Ilgaz, Y. Kumlutas, D.J. Harris, M.A. Carretero, R.K. Butlin, Evolution 76 (2022) 899–914.
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S. Freitas, A.M. Westram, T. Schwander, M. Arakelyan, Ç. Ilgaz, Y. Kumlutas, D.J. Harris, M.A. Carretero, R.K. Butlin, Evolution 76 (2022) 899–914.
2022 | Published | Journal Article | IST-REx-ID: 12122 |

Multiple centrosomes enhance migration and immune cell effector functions of mature dendritic cells
A.-K. Weier, M. Homrich, S. Ebbinghaus, P. Juda, E. Miková, R. Hauschild, L. Zhang, T. Quast, E. Mass, A. Schlitzer, W. Kolanus, S. Burgdorf, O.J. Gruß, M. Hons, S. Wieser, E. Kiermaier, Journal of Cell Biology 221 (2022).
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A.-K. Weier, M. Homrich, S. Ebbinghaus, P. Juda, E. Miková, R. Hauschild, L. Zhang, T. Quast, E. Mass, A. Schlitzer, W. Kolanus, S. Burgdorf, O.J. Gruß, M. Hons, S. Wieser, E. Kiermaier, Journal of Cell Biology 221 (2022).
2022 | Draft | Preprint | IST-REx-ID: 17157 |

Spectrum of equivariant cohomology as a fixed point scheme
T. Hausel, K.P. Rychlewicz, ArXiv (n.d.).
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T. Hausel, K.P. Rychlewicz, ArXiv (n.d.).
2022 | Published | Journal Article | IST-REx-ID: 12144 |

Adenylate cyclase activity of TIR1/AFB auxin receptors in plants
L. Qi, M. Kwiatkowski, H. Chen, L. Hörmayer, S.A. Sinclair, M. Zou, C.I. del Genio, M.F. Kubeš, R. Napier, K. Jaworski, J. Friml, Nature 611 (2022) 133–138.
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L. Qi, M. Kwiatkowski, H. Chen, L. Hörmayer, S.A. Sinclair, M. Zou, C.I. del Genio, M.F. Kubeš, R. Napier, K. Jaworski, J. Friml, Nature 611 (2022) 133–138.
2022 | Published | Journal Article | IST-REx-ID: 10411 |

Bending to auxin: Fast acid growth for tropisms
L. Li, M.C. Gallei, J. Friml, Trends in Plant Science 27 (2022) 440–449.
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L. Li, M.C. Gallei, J. Friml, Trends in Plant Science 27 (2022) 440–449.
2022 | Published | Journal Article | IST-REx-ID: 12109 |

Quantifying nanoscale charge density features of contact-charged surfaces with an FEM/KPFM-hybrid approach
F. Pertl, J.C.A. Sobarzo Ponce, L.B. Shafeek, T. Cramer, S.R. Waitukaitis, Physical Review Materials 6 (2022).
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F. Pertl, J.C.A. Sobarzo Ponce, L.B. Shafeek, T. Cramer, S.R. Waitukaitis, Physical Review Materials 6 (2022).
2022 | Published | Journal Article | IST-REx-ID: 9649 |

The topological correctness of PL approximations of isomanifolds
J.-D. Boissonnat, M. Wintraecken, Foundations of Computational Mathematics 22 (2022) 967–1012.
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J.-D. Boissonnat, M. Wintraecken, Foundations of Computational Mathematics 22 (2022) 967–1012.
2022 | Published | Journal Article | IST-REx-ID: 17069 |

RALF peptide signaling controls the polytubey block in Arabidopsis
Zhong S, Li L, Wang Z, Ge Z, Li Q, Bleckmann A, Wang J, Song Z, Shi Y, Liu T, Li L, Zhou H, Wang Y, Zhang L, Wu H-M, Lai L, Gu H, Dong J, Cheung AY, Dresselhaus T, Qu L-J. 2022. RALF peptide signaling controls the polytubey block in Arabidopsis. Science. 375(6578), 290–296.
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Zhong S, Li L, Wang Z, Ge Z, Li Q, Bleckmann A, Wang J, Song Z, Shi Y, Liu T, Li L, Zhou H, Wang Y, Zhang L, Wu H-M, Lai L, Gu H, Dong J, Cheung AY, Dresselhaus T, Qu L-J. 2022. RALF peptide signaling controls the polytubey block in Arabidopsis. Science. 375(6578), 290–296.
2022 | Published | Journal Article | IST-REx-ID: 12495 |

FLEA: Provably robust fair multisource learning from unreliable training data
E.B. Iofinova, N.H. Konstantinov, C. Lampert, Transactions on Machine Learning Research (2022).
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E.B. Iofinova, N.H. Konstantinov, C. Lampert, Transactions on Machine Learning Research (2022).
2022 | Published | Conference Paper | IST-REx-ID: 12299 |

How well do sparse ImageNet models transfer?
E.B. Iofinova, A. Krumes, M. Kurtz, D.-A. Alistarh, in:, 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition, Institute of Electrical and Electronics Engineers, 2022, pp. 12256–12266.
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E.B. Iofinova, A. Krumes, M. Kurtz, D.-A. Alistarh, in:, 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition, Institute of Electrical and Electronics Engineers, 2022, pp. 12256–12266.
2022 | Published | Journal Article | IST-REx-ID: 11732 |

The BCS energy gap at high density
S.J. Henheik, A.B. Lauritsen, Journal of Statistical Physics 189 (2022).
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S.J. Henheik, A.B. Lauritsen, Journal of Statistical Physics 189 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12184 |

On adiabatic theory for extended fermionic lattice systems
S.J. Henheik, T. Wessel, Journal of Mathematical Physics 63 (2022).
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S.J. Henheik, T. Wessel, Journal of Mathematical Physics 63 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10623 |

The BCS critical temperature at high density
S.J. Henheik, Mathematical Physics, Analysis and Geometry 25 (2022).
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S.J. Henheik, Mathematical Physics, Analysis and Geometry 25 (2022).
2022 | Published | Conference Paper | IST-REx-ID: 12780 |

CGX: Adaptive system support for communication-efficient deep learning
I. Markov, H. Ramezanikebrya, D.-A. Alistarh, in:, Proceedings of the 23rd ACM/IFIP International Middleware Conference, Association for Computing Machinery, 2022, pp. 241–254.
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I. Markov, H. Ramezanikebrya, D.-A. Alistarh, in:, Proceedings of the 23rd ACM/IFIP International Middleware Conference, Association for Computing Machinery, 2022, pp. 241–254.
2022 | Submitted | Journal Article | IST-REx-ID: 11660 |

A window to the persistence of 1D maps. I: Geometric characterization of critical point pairs
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, LIPIcs (n.d.).
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, LIPIcs (n.d.).
2022 | Draft | Journal Article | IST-REx-ID: 11658 |

Depth in arrangements: Dehn–Sommerville–Euler relations with applications
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Leibniz International Proceedings on Mathematics (n.d.).
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Leibniz International Proceedings on Mathematics (n.d.).
2022 | Draft | Preprint | IST-REx-ID: 15090 |

On the size of chromatic Delaunay mosaics
R. Biswas, S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian, ArXiv (n.d.).
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R. Biswas, S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian, ArXiv (n.d.).
2022 | Published | Journal Article | IST-REx-ID: 11734 |

Molecular framework integrating nitrate sensing in root and auxin-guided shoot adaptive responses
R. Abualia, K. Ötvös, O. Novák, E. Bouguyon, K. Domanegg, A. Krapp, P. Nacry, A. Gojon, B. Lacombe, E. Benková, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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R. Abualia, K. Ötvös, O. Novák, E. Bouguyon, K. Domanegg, A. Krapp, P. Nacry, A. Gojon, B. Lacombe, E. Benková, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12081 |

Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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M. Hledik, N.H. Barton, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10841 |

Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
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D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
2022 | Published | Journal Article | IST-REx-ID: 10927 |

PaReBrick: PArallel REarrangements and BReaks identification toolkit
A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
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A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
2022 | Published | Journal Article | IST-REx-ID: 10889 |

Electron microscopic visualization of single molecules by tag-mediated metal particle labeling
R. Shigemoto, Microscopy 71 (2022) i72–i80.
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R. Shigemoto, Microscopy 71 (2022) i72–i80.
2022 | Published | Journal Article | IST-REx-ID: 10926 |

Very short mountings are enough for sperm transfer in Littorina saxatilis
S. Perini, R. Butlin, A.M. Westram, K. Johannesson, Journal of Molluscan Studies 88 (2022).
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S. Perini, R. Butlin, A.M. Westram, K. Johannesson, Journal of Molluscan Studies 88 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12684 |

Effective equidistribution of lattice points in positive characteristic
T. Horesh, F. Paulin, Journal de Theorie Des Nombres de Bordeaux 34 (2022) 679–703.
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T. Horesh, F. Paulin, Journal de Theorie Des Nombres de Bordeaux 34 (2022) 679–703.
2022 | Published | Journal Article | IST-REx-ID: 10016 |

Fourteen stations of auxin
J. Friml, Cold Spring Harbor Perspectives in Biology 14 (2022).
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J. Friml, Cold Spring Harbor Perspectives in Biology 14 (2022).
2022 | Published | Conference Paper | IST-REx-ID: 12537 |

Memorization and optimization in deep neural networks with minimum over-parameterization
S. Bombari, M.H. Amani, M. Mondelli, in:, 36th Conference on Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2022, pp. 7628–7640.
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S. Bombari, M.H. Amani, M. Mondelli, in:, 36th Conference on Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2022, pp. 7628–7640.
2022 | Published | Journal Article | IST-REx-ID: 11135 |

On the operator norm of a Hermitian random matrix with correlated entries
J. Reker, Random Matrices: Theory and Applications 11 (2022).
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J. Reker, Random Matrices: Theory and Applications 11 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11723 |

RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis
L. Li, H. Chen, S.S. Alotaibi, A. Pěnčík, M. Adamowski, O. Novák, J. Friml, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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L. Li, H. Chen, S.S. Alotaibi, A. Pěnčík, M. Adamowski, O. Novák, J. Friml, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10888 |

Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling
Q. Lu, Y. Zhang, J. Hellner, C. Giannini, X. Xu, J. Pauwels, Q. Ma, W. Dejonghe, H. Han, B. Van De Cotte, F. Impens, K. Gevaert, I. De Smet, J. Friml, D.M. Molina, E. Russinova, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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Q. Lu, Y. Zhang, J. Hellner, C. Giannini, X. Xu, J. Pauwels, Q. Ma, W. Dejonghe, H. Han, B. Van De Cotte, F. Impens, K. Gevaert, I. De Smet, J. Friml, D.M. Molina, E. Russinova, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11702 |

The "New Synthesis"
N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10717 |

Auxin analog-induced Ca2+ signaling is independent of inhibition of endosomal aggregation in Arabidopsis roots
R. Wang, E. Himschoot, M. Grenzi, J. Chen, A. Safi, M. Krebs, K. Schumacher, M. Nowack, W. Moeder, K. Yoshioka, D. Van Damme, I. De Smet, D. Geelen, T. Beeckman, J. Friml, A. Costa, S. Vanneste, Journal of Experimental Botany 73 (2022).
[Submitted Version]
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R. Wang, E. Himschoot, M. Grenzi, J. Chen, A. Safi, M. Krebs, K. Schumacher, M. Nowack, W. Moeder, K. Yoshioka, D. Van Damme, I. De Smet, D. Geelen, T. Beeckman, J. Friml, A. Costa, S. Vanneste, Journal of Experimental Botany 73 (2022).
2022 | Published | Thesis | IST-REx-ID: 11777 |

High-dimensional expansion and crossing numbers of simplicial complexes
P. Wild, High-Dimensional Expansion and Crossing Numbers of Simplicial Complexes, Institute of Science and Technology Austria, 2022.
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P. Wild, High-Dimensional Expansion and Crossing Numbers of Simplicial Complexes, Institute of Science and Technology Austria, 2022.
2022 | Published | Journal Article | IST-REx-ID: 11998 |

A simple model for high rotational excitations of molecules in a superfluid
I. Cherepanov, G. Bighin, C.A. Schouder, A.S. Chatterley, H. Stapelfeldt, M. Lemeshko, New Journal of Physics 24 (2022).
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I. Cherepanov, G. Bighin, C.A. Schouder, A.S. Chatterley, H. Stapelfeldt, M. Lemeshko, New Journal of Physics 24 (2022).
2022 | Published | Book Chapter | IST-REx-ID: 17085 |

Mosses: Accessible Systems for Plant Development Studies
J. Floriach-Clark, H. Tang, V. Willemsen, in:, I.Y. Abdurakhmonov (Ed.), Model Organisms in Plant Genetics, IntechOpen, 2022.
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J. Floriach-Clark, H. Tang, V. Willemsen, in:, I.Y. Abdurakhmonov (Ed.), Model Organisms in Plant Genetics, IntechOpen, 2022.
2022 | Published | Journal Article | IST-REx-ID: 12291 |

ABP1–TMK auxin perception for global phosphorylation and auxin canalization
Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.
[Submitted Version]
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Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.
2022 | Published | Journal Article | IST-REx-ID: 11739 |

Evolutionary $\Gamma$-convergence of entropic gradient flow structures for Fokker-Planck equations in multiple dimensions
D.L. Forkert, J. Maas, L. Portinale, SIAM Journal on Mathematical Analysis 54 (2022) 4297–4333.
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D.L. Forkert, J. Maas, L. Portinale, SIAM Journal on Mathematical Analysis 54 (2022) 4297–4333.
2022 | Research Data Reference | IST-REx-ID: 14520 |

Compact vacuum gap transmon qubits: Selective and sensitive probes for superconductor surface losses
M. Zemlicka, E. Redchenko, M. Peruzzo, F. Hassani, A. Trioni, S. Barzanjeh, J.M. Fink, (2022).
[Published Version]
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M. Zemlicka, E. Redchenko, M. Peruzzo, F. Hassani, A. Trioni, S. Barzanjeh, J.M. Fink, (2022).
2022 | Published | Journal Article | IST-REx-ID: 10851 |

Detecting induced p±ip pairing at the Al-InAs interface with a quantum microwave circuit
D.T. Phan, J.L. Senior, A. Ghazaryan, M. Hatefipour, W.M. Strickland, J. Shabani, M. Serbyn, A.P. Higginbotham, Physical Review Letters 128 (2022).
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D.T. Phan, J.L. Senior, A. Ghazaryan, M. Hatefipour, W.M. Strickland, J. Shabani, M. Serbyn, A.P. Higginbotham, Physical Review Letters 128 (2022).
2022 | Draft | Preprint | IST-REx-ID: 18293 |

On a question of Davenport and diagonal cubic forms over Fq(t)
J. Glas, L. Hochfilzer, ArXiv (n.d.).
[Preprint]
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J. Glas, L. Hochfilzer, ArXiv (n.d.).
2022 | Published | Conference Paper | IST-REx-ID: 10820
Effects of streaky structures on the instability of supersonic boundary layers
J. Liu, E. Marensi, X. Wu, in:, IUTAM Laminar-Turbulent Transition, Springer Nature, 2022, pp. 587–598.
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J. Liu, E. Marensi, X. Wu, in:, IUTAM Laminar-Turbulent Transition, Springer Nature, 2022, pp. 587–598.
2022 | Published | Journal Article | IST-REx-ID: 11469 |

Localization of a mobile impurity interacting with an Anderson insulator
P. Brighi, A. Michailidis, K. Kirova, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
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P. Brighi, A. Michailidis, K. Kirova, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
2022 | Published | Journal Article | IST-REx-ID: 19822 |

Tuneable electron–magnon coupling of ferromagnetic surface states in PdCoO2
F. Mazzola, C.-M. Yim, V. Sunko, S. Khim, P. Kushwaha, O.J. Clark, L. Bawden, I. Marković, D. Chakraborti, T.K. Kim, M. Hoesch, A.P. Mackenzie, P. Wahl, P.D.C. King, Npj Quantum Materials 7 (2022).
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F. Mazzola, C.-M. Yim, V. Sunko, S. Khim, P. Kushwaha, O.J. Clark, L. Bawden, I. Marković, D. Chakraborti, T.K. Kim, M. Hoesch, A.P. Mackenzie, P. Wahl, P.D.C. King, Npj Quantum Materials 7 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10829 |

Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, ACS Sensors 7 (2022) 504–512.
[Published Version]
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R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, ACS Sensors 7 (2022) 504–512.
2022 | Published | Journal Article | IST-REx-ID: 10827 |

High-pressure phase behaviors of titanium dioxide revealed by a Δ-learning potential
J.G. Lee, C.J. Pickard, B. Cheng, The Journal of Chemical Physics 156 (2022).
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J.G. Lee, C.J. Pickard, B. Cheng, The Journal of Chemical Physics 156 (2022).
2022 | Research Data Reference | IST-REx-ID: 10833 |

Field-effect transistor with a plasmonic fiber optic gate electrode as a multivariable biosensor device
R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, (2022).
[Published Version]
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R. Hasler, C. Reiner-Rozman, S. Fossati, P. Aspermair, J. Dostalek, S. Lee, M. Ibáñez, J. Bintinger, W. Knoll, (2022).
2022 | Published | Journal Article | IST-REx-ID: 9794 |

Multitier mechanics control stromal adaptations in swelling lymph nodes
F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T. Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg, W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology 23 (2022) 1246–1255.
[Published Version]
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F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T. Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg, W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology 23 (2022) 1246–1255.
2022 | Published | Journal Article | IST-REx-ID: 12084 |

Regimes and mechanisms of transient amplification in abstract and biological neural networks
G. Christodoulou, T.P. Vogels, E.J. Agnes, PLoS Computational Biology 18 (2022).
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G. Christodoulou, T.P. Vogels, E.J. Agnes, PLoS Computational Biology 18 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10604 |

Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics, and disease control
M. Turelli, N.H. Barton, Evolution Letters 6 (2022) 92–105.
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M. Turelli, N.H. Barton, Evolution Letters 6 (2022) 92–105.
2022 | Published | Journal Article | IST-REx-ID: 10754 |

Developing a mathematical model of intracellular Calcium dynamics for evaluating combined anticancer effects of afatinib and RP4010 in esophageal cancer
Y. Chang, M. Funk, S. Roy, E.R. Stephenson, S. Choi, H.V. Kojouharov, B. Chen, Z. Pan, International Journal of Molecular Sciences 23 (2022).
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Y. Chang, M. Funk, S. Roy, E.R. Stephenson, S. Choi, H.V. Kojouharov, B. Chen, Z. Pan, International Journal of Molecular Sciences 23 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12156 |

Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
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B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11379 |

Spontaneous gully-polarized quantum hall states in ABA trilayer graphene
F. Winterer, A.M. Seiler, A. Ghazaryan, F.R. Geisenhof, K. Watanabe, T. Taniguchi, M. Serbyn, R.T. Weitz, Nano Letters 22 (2022) 3317–3322.
[Preprint]
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F. Winterer, A.M. Seiler, A. Ghazaryan, F.R. Geisenhof, K. Watanabe, T. Taniguchi, M. Serbyn, R.T. Weitz, Nano Letters 22 (2022) 3317–3322.
2022 | Published | Journal Article | IST-REx-ID: 10771 |

Theory of chirality induced spin selectivity: Progress and challenges
Evers F, Aharony A, Bar-Gill N, Entin-Wohlman O, Hedegård P, Hod O, Jelinek P, Kamieniarz G, Lemeshko M, Michaeli K, Mujica V, Naaman R, Paltiel Y, Refaely-Abramson S, Tal O, Thijssen J, Thoss M, Van Ruitenbeek JM, Venkataraman L, Waldeck DH, Yan B, Kronik L. 2022. Theory of chirality induced spin selectivity: Progress and challenges. Advanced Materials. 34(13), 2106629.
[Preprint]
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Evers F, Aharony A, Bar-Gill N, Entin-Wohlman O, Hedegård P, Hod O, Jelinek P, Kamieniarz G, Lemeshko M, Michaeli K, Mujica V, Naaman R, Paltiel Y, Refaely-Abramson S, Tal O, Thijssen J, Thoss M, Van Ruitenbeek JM, Venkataraman L, Waldeck DH, Yan B, Kronik L. 2022. Theory of chirality induced spin selectivity: Progress and challenges. Advanced Materials. 34(13), 2106629.
2022 | Research Data Reference | IST-REx-ID: 11686 |

Wolbachia frequency data from: Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics and disease control
M. Turelli, N.H. Barton, (2022).
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M. Turelli, N.H. Barton, (2022).
2022 | Published | Journal Article | IST-REx-ID: 11356 |

Distinct electron and hole transports in SnSe crystals
C. Chang, B. Qin, L. Su, L.D. Zhao, Science Bulletin 67 (2022) 1105–1107.
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C. Chang, B. Qin, L. Su, L.D. Zhao, Science Bulletin 67 (2022) 1105–1107.
2022 | Published | Journal Article | IST-REx-ID: 12174 |

Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis
Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.
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Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.
2022 | Published | Journal Article | IST-REx-ID: 11478 |

A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation
K. Bartalska, V. Hübschmann, M. Korkut, R.J. Cubero, A. Venturino, K. Rössler, T. Czech, S. Siegert, IScience 25 (2022).
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K. Bartalska, V. Hübschmann, M. Korkut, R.J. Cubero, A. Venturino, K. Rössler, T. Czech, S. Siegert, IScience 25 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11400 |

Controlling cluster size in 2D phase-separating binary mixtures with specific interactions
I. Palaia, A. Šarić, The Journal of Chemical Physics 156 (2022).
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I. Palaia, A. Šarić, The Journal of Chemical Physics 156 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10712 |

The solute carrier MFSD1 decreases β1 integrin’s activation status and thus tumor metastasis
M. Roblek, J. Bicher, M. van Gogh, A. György, R. Seeböck, B. Szulc, M. Damme, M. Olczak, L. Borsig, D.E. Siekhaus, Frontiers in Oncology 12 (2022).
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M. Roblek, J. Bicher, M. van Gogh, A. György, R. Seeböck, B. Szulc, M. Damme, M. Olczak, L. Borsig, D.E. Siekhaus, Frontiers in Oncology 12 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11143 |

Developmentally regulated impairment of parvalbumin interneuron synaptic transmission in an experimental model of Dravet syndrome
K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).
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K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10530 |

Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration
T. Zisis, D. Brückner, T. Brandstätter, W.X. Siow, J. d’Alessandro, A.M. Vollmar, C.P. Broedersz, S. Zahler, Biophysical Journal 121 (2022) P44-60.
[Published Version]
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T. Zisis, D. Brückner, T. Brandstätter, W.X. Siow, J. d’Alessandro, A.M. Vollmar, C.P. Broedersz, S. Zahler, Biophysical Journal 121 (2022) P44-60.
2022 | Published | Journal Article | IST-REx-ID: 12117 |

Assessing human iPSC-derived microglia identity and function by immunostaining, phagocytosis, calcium activity, and inflammation assay
V. Hübschmann, M. Korkut, S. Siegert, STAR Protocols 3 (2022).
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V. Hübschmann, M. Korkut, S. Siegert, STAR Protocols 3 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12332 |

Efficient coding theory of dynamic attentional modulation
W.F. Mlynarski, G. Tkačik, PLoS Biology 20 (2022) e3001889.
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W.F. Mlynarski, G. Tkačik, PLoS Biology 20 (2022) e3001889.
2022 | Published | Journal Article | IST-REx-ID: 11332 |

Convergence rate to the Tracy–Widom laws for the largest Eigenvalue of Wigner matrices
K. Schnelli, Y. Xu, Communications in Mathematical Physics 393 (2022) 839–907.
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| arXiv
K. Schnelli, Y. Xu, Communications in Mathematical Physics 393 (2022) 839–907.
2022 | Published | Journal Article | IST-REx-ID: 10918 |

Macrophage mitochondrial bioenergetics and tissue invasion are boosted by an Atossa-Porthos axis in Drosophila
S. Emtenani, E.T. Martin, A. György, J. Bicher, J.-W. Genger, T. Köcher, M. Akhmanova, M. Pereira Guarda, M. Roblek, A. Bergthaler, T.R. Hurd, P. Rangan, D.E. Siekhaus, The Embo Journal 41 (2022).
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S. Emtenani, E.T. Martin, A. György, J. Bicher, J.-W. Genger, T. Köcher, M. Akhmanova, M. Pereira Guarda, M. Roblek, A. Bergthaler, T.R. Hurd, P. Rangan, D.E. Siekhaus, The Embo Journal 41 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12152 |

Modelling membrane reshaping by staged polymerization of ESCRT-III filaments
X. Jiang, L. Harker-Kirschneck, C.E. Vanhille-Campos, A.-K. Pfitzner, E. Lominadze, A. Roux, B. Baum, A. Šarić, PLOS Computational Biology 18 (2022).
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X. Jiang, L. Harker-Kirschneck, C.E. Vanhille-Campos, A.-K. Pfitzner, E. Lominadze, A. Roux, B. Baum, A. Šarić, PLOS Computational Biology 18 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11841 |

Adsorption free energy predicts amyloid protein nucleation rates
Z. Toprakcioglu, A. Kamada, T.C.T. Michaels, M. Xie, J. Krausser, J. Wei, A. Šarić, M. Vendruscolo, T.P.J. Knowles, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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Z. Toprakcioglu, A. Kamada, T.C.T. Michaels, M. Xie, J. Krausser, J. Wei, A. Šarić, M. Vendruscolo, T.P.J. Knowles, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Published | Journal Article | IST-REx-ID: 10642 |

Local stability of ground states in locally gapped and weakly interacting quantum spin systems
S.J. Henheik, S. Teufel, T. Wessel, Letters in Mathematical Physics 112 (2022).
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S.J. Henheik, S. Teufel, T. Wessel, Letters in Mathematical Physics 112 (2022).