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376 Publications

2024 | Thesis | IST-REx-ID: 15020 |

Hledik, M. (2024). Genetic information and biological optimization. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:15020

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2024 | Journal Article | IST-REx-ID: 15119 |

Agresti, A., & Veraar, M. (2024). Stochastic maximal Lp(Lq)-regularity for second order systems with periodic boundary conditions. Annales de l’institut Henri Poincare Probability and Statistics. Institute of Mathematical Statistics. https://doi.org/10.1214/22-AIHP1333

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2024 | Journal Article | IST-REx-ID: 15169

Chintaluri, C., Bejtka, M., Sredniawa, W., Czerwinski, M., Dzik, J. M., Jedrzejewska-Szmek, J., & Wojciki, D. K. (2024). kCSD-python, reliable current source density estimation with quality control. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1011941

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2024 | Journal Article | IST-REx-ID: 15146 |

Zens, B., Fäßler, F., Hansen, J., Hauschild, R., Datler, J., Hodirnau, V.-V., … Schur, F. K. (2024). Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix. Journal of Cell Biology. Rockefeller University Press. https://doi.org/10.1083/jcb.202309125

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Journal Article | IST-REx-ID: 15315 |

Brückner, D., & Broedersz, C. P. (2024). Learning dynamical models of single and collective cell migration: a review. Reports on Progress in Physics. IOP Publishing. https://doi.org/10.1088/1361-6633/ad36d2

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2023 | Journal Article | IST-REx-ID: 12469 |

Viljakainen, L., Fürst, M., Grasse, A. V., Jurvansuu, J., Oh, J., Tolonen, L., … Cremer, S. (2023). Antiviral immune response reveals host-specific virus infections in natural ant populations. Frontiers in Microbiology. Frontiers. https://doi.org/10.3389/fmicb.2023.1119002

2023 | Journal Article | IST-REx-ID: 12567 |

Mrestani, A., Lichter, K., Sirén, A. L., Heckmann, M., Paul, M. M., & Pauli, M. (2023). Single-molecule localization microscopy of presynaptic active zones in Drosophila melanogaster after rapid cryofixation. International Journal of Molecular Sciences. MDPI. https://doi.org/10.3390/ijms24032128

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2023 | Journal Article | IST-REx-ID: 12704 |

Lechner, M., Amini, A., Rus, D., & Henzinger, T. A. (2023). Revisiting the adversarial robustness-accuracy tradeoff in robot learning. IEEE Robotics and Automation Letters. Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/LRA.2023.3240930

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2023 | Journal Article | IST-REx-ID: 12759 |

Rothman, J. S., Borges Merjane, C., Holderith, N., Jonas, P. M., & Angus Silver, R. (2023). Validation of a stereological method for estimating particle size and density from 2D projections with high accuracy. PLoS ONE. Public Library of Science. https://doi.org/10.1371/journal.pone.0277148

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2023 | Journal Article | IST-REx-ID: 12758 |

Pak, M. A., Markhieva, K. A., Novikova, M. S., Petrov, D. S., Vorobyev, I. S., Maksimova, E., … Ivankov, D. N. (2023). Using AlphaFold to predict the impact of single mutations on protein stability and function. PLoS ONE. Public Library of Science. https://doi.org/10.1371/journal.pone.0282689

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2023 | Journal Article | IST-REx-ID: 12818 |

Brandstätter, T., Brückner, D., Han, Y. L., Alert, R., Guo, M., & Broedersz, C. P. (2023). Curvature induces active velocity waves in rotating spherical tissues. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-023-37054-2

2023 | Journal Article | IST-REx-ID: 12876 |

Beneš, N., Brim, L., Huvar, O., Pastva, S., & Šafránek, D. (2023). Boolean network sketches: A unifying framework for logical model inference. Bioinformatics. Oxford Academic. https://doi.org/10.1093/bioinformatics/btad158

2023 | Journal Article | IST-REx-ID: 13033 |

Zavadakova, A., Vistejnova, L., Belinova, T., Tichanek, F., Bilikova, D., & Mouton, P. R. (2023). Novel stereological method for estimation of cell counts in 3D collagen scaffolds. Scientific Reports. Springer Nature. https://doi.org/10.1038/s41598-023-35162-z

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2023 | Journal Article | IST-REx-ID: 12159 |

Shipilina, D., Pal, A., Stankowski, S., Chan, Y. F., & Barton, N. H. (2023). On the origin and structure of haplotype blocks. Molecular Ecology. Wiley. https://doi.org/10.1111/mec.16793

2023 | Journal Article | IST-REx-ID: 12544 |

Koehl, P., Akopyan, A., & Edelsbrunner, H. (2023). Computing the volume, surface area, mean, and Gaussian curvatures of molecules and their derivatives. Journal of Chemical Information and Modeling. American Chemical Society. https://doi.org/10.1021/acs.jcim.2c01346

2023 | Journal Article | IST-REx-ID: 12762 |

Lombardi, F., Pepic, S., Shriki, O., Tkačik, G., & De Martino, D. (2023). Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain. Nature Computational Science. Springer Nature. https://doi.org/10.1038/s43588-023-00410-9

[Published Version] View | Files available | DOI | arXiv

2023 | Conference Paper | IST-REx-ID: 14241 |

Tojo, K., Shamir, A., Bickel, B., & Umetani, N. (2023). Stealth shaper: Reflectivity optimization as surface stylization. In SIGGRAPH 2023 Conference Proceedings. Los Angeles, CA, United States: Association for Computing Machinery. https://doi.org/10.1145/3588432.3591542

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2023 | Conference Paper | IST-REx-ID: 13310 |

Henzinger, T. A., Karimi, M., Kueffner, K., & Mallik, K. (2023). Monitoring algorithmic fairness. In Computer Aided Verification (Vol. 13965, pp. 358–382). Paris, France: Springer Nature. https://doi.org/10.1007/978-3-031-37703-7_17

[Published Version] View | Files available | DOI | arXiv

2023 | Conference Paper | IST-REx-ID: 14105 |

Sinha, S., Gehler, P., Locatello, F., & Schiele, B. (2023). TeST: Test-time Self-Training under distribution shift. In 2023 IEEE/CVF Winter Conference on Applications of Computer Vision. Waikoloa, HI, United States: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/wacv56688.2023.00278

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2023 | Conference Paper | IST-REx-ID: 14211 |

Montagna, F., Noceti, N., Rosasco, L., Zhang, K., & Locatello, F. (2023). Causal discovery with score matching on additive models with arbitrary noise. In 2nd Conference on Causal Learning and Reasoning. Tübingen, Germany.

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2023 | Journal Article | IST-REx-ID: 12707 |

Erdös, L., & Xu, Y. (2023). Small deviation estimates for the largest eigenvalue of Wigner matrices. Bernoulli. Bernoulli Society for Mathematical Statistics and Probability. https://doi.org/10.3150/22-BEJ1490

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2023 | Journal Article | IST-REx-ID: 12763 |

Boissonnat, J. D., & Wintraecken, M. (2023). The reach of subsets of manifolds. Journal of Applied and Computational Topology. Springer Nature. https://doi.org/10.1007/s41468-023-00116-x

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2023 | Journal Article | IST-REx-ID: 14404

Balazs, D., & Ibáñez, M. (2023). Widening the use of 3D printing. Science. AAAS. https://doi.org/10.1126/science.adk3070

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2023 | Journal Article | IST-REx-ID: 13315 |

Barbier, J., Camilli, F., Mondelli, M., & Sáenz, M. (2023). Fundamental limits in structured principal component analysis and how to reach them. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2302028120

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2023 | Journal Article | IST-REx-ID: 12761 |

Cipolloni, G., Erdös, L., & Schröder, D. J. (2023). Functional central limit theorems for Wigner matrices. Annals of Applied Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/22-AAP1820

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2023 | Thesis | IST-REx-ID: 14422

Confavreux, B. J. (2023). Synapseek: Meta-learning synaptic plasticity rules. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:14422

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2023 | Conference Paper | IST-REx-ID: 14458 |

Frantar, E., & Alistarh, D.-A. (2023). SparseGPT: Massive language models can be accurately pruned in one-shot. In Proceedings of the 40th International Conference on Machine Learning (Vol. 202, pp. 10323–10337). Honolulu, Hawaii, HI, United States: ML Research Press.

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2023 | Conference Paper | IST-REx-ID: 14448 |

Kolmogorov, V. (2023). Solving relaxations of MAP-MRF problems: Combinatorial in-face Frank-Wolfe directions. In Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition (Vol. 2023, pp. 11980–11989). Vancouver, Canada: IEEE. https://doi.org/10.1109/CVPR52729.2023.01153

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2023 | Journal Article | IST-REx-ID: 14488 |

Rao, P., Mallikarjun, B. R., Fox, G., Weyrich, T., Bickel, B., Pfister, H., … Elgharib, M. (2023). A deeper analysis of volumetric relightiable faces. International Journal of Computer Vision. Springer Nature. https://doi.org/10.1007/s11263-023-01899-3

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2023 | Journal Article | IST-REx-ID: 14517 |

Zemlicka, M., Redchenko, E., Peruzzo, M., Hassani, F., Trioni, A., Barzanjeh, S., & Fink, J. M. (2023). Compact vacuum-gap transmon qubits: Selective and sensitive probes for superconductor surface losses. Physical Review Applied. American Physical Society. https://doi.org/10.1103/PhysRevApplied.20.044054

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2023 | Journal Article | IST-REx-ID: 14543 |

Kaiyrzhanov R, Rad A, Lin S-J, Bertoli-Avella A, Kallemeijn WW, Godwin A, Zaki MS, Huang K, Lau T, Petree C, Efthymiou S, Ghayoor Karimiani E, Hempel M, Normand EA, Rudnik-Schöneborn S, Schatz UA, Baggelaar MP, Ilyas M, Sultan T, Alvi JR, Ganieva M, Fowler B, Aanicai R, Akay Tayfun G, Al Saman A, Alswaid A, Amiri N, Asilova N, Shotelersuk V, Yeetong P, Azam M, Babaei M, Bahrami Monajemi G, Mohammadi P, Samie S, Banu SH, Basto JP, Kortüm F, Bauer M, Bauer P, Beetz C, Garshasbi M, Hameed Issa A, Eyaid W, Ahmed H, Hashemi N, Hassanpour K, Herman I, Ibrohimov S, Abdul-Majeed BA, Imdad M, Isrofilov M, Kaiyal Q, Khan S, Kirmse B, Koster J, Lourenço CM, Mitani T, Moldovan O, Murphy D, Najafi M, Pehlivan D, Rocha ME, Salpietro V, Schmidts M, Shalata A, Mahroum M, Talbeya JK, Taylor RW, Vazquez D, Vetro A, Waterham HR, Zaman M, Schrader TA, Chung WK, Guerrini R, Lupski JR, Gleeson J, Suri M, Jamshidi Y, Bhatia KP, Vona B, Schrader M, Severino M, Guille M, Tate EW, Varshney GK, Houlden H, Maroofian R. 2023. Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders. Brain., awad380.

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2023 | Journal Article | IST-REx-ID: 14667 |

Erdös, L., & Ji, H. C. (2023). Functional CLT for non-Hermitian random matrices. Annales de l’institut Henri Poincare (B) Probability and Statistics. Institute of Mathematical Statistics. https://doi.org/10.1214/22-AIHP1304

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2023 | Conference Paper | IST-REx-ID: 12976 |

Liao, K., Tricard, T., Piovarci, M., Seidel, H.-P., & Babaei, V. (2023). Learning deposition policies for fused multi-material 3D printing. In 2023 IEEE International Conference on Robotics and Automation (Vol. 2023, pp. 12345–12352). London, United Kingdom: IEEE. https://doi.org/10.1109/ICRA48891.2023.10160465

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2023 | Conference Paper | IST-REx-ID: 13321 |

Xu, Y., Hou, T. Q., Liang, S. S., & Mondelli, M. (2023). Approximate message passing for multi-layer estimation in rotationally invariant models. In 2023 IEEE Information Theory Workshop (pp. 294–298). Saint-Malo, France: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/ITW55543.2023.10160238

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2023 | Journal Article | IST-REx-ID: 13265 |

Zhong, F., Xu, Y., Zhao, H., & Lu, L. (2023). As-Continuous-As-Possible extrusion-based fabrication of surface models. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3575859

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2023 | Journal Article | IST-REx-ID: 14041 |

Méhes, E., Mones, E., Varga, M., Zsigmond, Á., Biri-Kovács, B., Nyitray, L., … Vicsek, T. (2023). 3D cell segregation geometry and dynamics are governed by tissue surface tension regulation. Communications Biology. Springer Nature. https://doi.org/10.1038/s42003-023-05181-7

2023 | Journal Article | IST-REx-ID: 14421 |

Henheik, S. J., & Tumulka, R. (2023). Creation rate of Dirac particles at a point source. Journal of Physics A: Mathematical and Theoretical. IOP Publishing. https://doi.org/10.1088/1751-8121/acfe62

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2023 | Journal Article | IST-REx-ID: 14434

He, R., Yang, L., Zhang, Y., Jiang, D., Lee, S., Horta, S., … Cabot, A. (2023). A 3d‐4d‐5d high entropy alloy as a bifunctional oxygen catalyst for robust aqueous zinc–air batteries. Advanced Materials. Wiley. https://doi.org/10.1002/adma.202303719

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2023 | Journal Article | IST-REx-ID: 14464 |

Ambrus, Á., Csikós, M., Kiss, G., Pach, J., & Somlai, G. (2023). Optimal embedded and enclosing isosceles triangles. International Journal of Foundations of Computer Science. World Scientific Publishing. https://doi.org/10.1142/S012905412342008X

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2023 | Conference Paper | IST-REx-ID: 14691 |

Auerbach, B., Cueto Noval, M., Pascual Perez, G., & Pietrzak, K. Z. (2023). On the cost of post-compromise security in concurrent Continuous Group-Key Agreement. In 21st International Conference on Theory of Cryptography (Vol. 14371, pp. 271–300). Taipei, Taiwan: Springer Nature. https://doi.org/10.1007/978-3-031-48621-0_10

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2023 | Journal Article | IST-REx-ID: 14750 |

Ding, X., & Ji, H. C. (2023). Local laws for multiplication of random matrices. The Annals of Applied Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/22-aap1882

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2023 | Research Data | IST-REx-ID: 12817 |

Danzl, J. G. (2023). Research data for the publication “Dense 4D nanoscale reconstruction of living brain tissue.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:12817

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2023 | Journal Article | IST-REx-ID: 13267 |

Velicky, P., Miguel Villalba, E., Michalska, J. M., Lyudchik, J., Wei, D., Lin, Z., … Danzl, J. G. (2023). Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. Springer Nature. https://doi.org/10.1038/s41592-023-01936-6

2023 | Journal Article | IST-REx-ID: 14770

Danzl, J. G., & Velicky, P. (2023). LIONESS enables 4D nanoscale reconstruction of living brain tissue. Nature Methods. Springer Nature. https://doi.org/10.1038/s41592-023-01937-5

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2023 | Journal Article | IST-REx-ID: 14775 |

Schnelli, K., & Xu, Y. (2023). Convergence rate to the Tracy–Widom laws for the largest eigenvalue of sample covariance matrices. The Annals of Applied Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/22-aap1826

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2023 | Conference Paper | IST-REx-ID: 14768 |

Cohen-Addad, V., Saulpic, D., & Schwiegelshohn, C. (2023). Deterministic clustering in high dimensional spaces: Sketches and approximation. In 2023 IEEE 64th Annual Symposium on Foundations of Computer Science (pp. 1105–1130). Santa Cruz, CA, United States: IEEE. https://doi.org/10.1109/focs57990.2023.00066

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2023 | Journal Article | IST-REx-ID: 14788 |

Mund, M., Tschanz, A., Wu, Y.-L., Frey, F. F., Mehl, J. L., Kaksonen, M., … Ries, J. (2023). Clathrin coats partially preassemble and subsequently bend during endocytosis. Journal of Cell Biology. Rockefeller University Press. https://doi.org/10.1083/jcb.202206038

2023 | Conference Paper | IST-REx-ID: 14798 |

Chen, B., Jindal, A., Piovarci, M., Wang, C., Seidel, H. P., Didyk, P., … Mantiuk, R. K. (2023). The effect of display capabilities on the gloss consistency between real and virtual objects. In Proceedings of the SIGGRAPH Asia 2023 Conference. Sydney, Australia: Association for Computing Machinery. https://doi.org/10.1145/3610548.3618226

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2023 | Journal Article | IST-REx-ID: 13049 |

Freire, M., Bhargava, M., Schreck, C., Hugron, P.-A., Bickel, B., & Lefebvre, S. (2023). PCBend: Light up your 3D shapes with foldable circuit boards. Transactions on Graphics. Los Angeles, CA, United States: Association for Computing Machinery. https://doi.org/10.1145/3592411

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2023 | Thesis | IST-REx-ID: 13984

Franschitz, A. (2023). Individual and social immunity against viral infections in ants. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:13984

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2023 | Conference Paper | IST-REx-ID: 12979 |

Condor, J., Piovarci, M., Bickel, B., & Didyk, P. (2023). Gloss-aware color correction for 3D printing. In SIGGRAPH ’23 Conference Proceedings. Los Angeles, CA, United States: Association for Computing Machinery. https://doi.org/10.1145/3588432.3591546

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2023 | Thesis | IST-REx-ID: 12491 |

Zens, B. (2023). Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12491

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2023 | Thesis | IST-REx-ID: 12897 |

Hafner, C. (2023). Inverse shape design with parametric representations: Kirchhoff Rods and parametric surface models. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12897

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2022 | Journal Article | IST-REx-ID: 10939 |

Davidović, A., Chait, R. P., Batt, G., & Ruess, J. (2022). Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009950

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2022 | Journal Article | IST-REx-ID: 11638 |

Ngampruetikorn, V., Sachdeva, V., Torrence, J., Humplik, J., Schwab, D. J., & Palmer, S. E. (2022). Inferring couplings in networks across order-disorder phase transitions. Physical Review Research. American Physical Society. https://doi.org/10.1103/PhysRevResearch.4.023240

[Published Version] View | Files available | DOI | arXiv

2022 | Conference Paper | IST-REx-ID: 12135 |

Chen, B., Piovarci, M., Wang, C., Seidel, H.-P., Didyk, P., Myszkowski, K., & Serrano, A. (2022). Gloss management for consistent reproduction of real and virtual objects. In SIGGRAPH Asia 2022 Conference Papers (Vol. 2022). Daegu, South Korea: Association for Computing Machinery. https://doi.org/10.1145/3550469.3555406

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2022 | Preprint | IST-REx-ID: 12536 |

Barbier, J., Hou, T., Mondelli, M., & Saenz, M. (n.d.). The price of ignorance: How much does it cost to forget noise structure in low-rank matrix estimation? arXiv. https://doi.org/10.48550/arXiv.2205.10009

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2022 | Journal Article | IST-REx-ID: 12574 |

Kneib, M., Miles, E. S., Buri, P., Fugger, S., McCarthy, M., Shaw, T. E., … Pellicciotti, F. (2022). Sub-seasonal variability of supraglacial ice cliff melt rates and associated processes from time-lapse photogrammetry. The Cryosphere. Copernicus Publications. https://doi.org/10.5194/tc-16-4701-2022

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2022 | Conference Paper | IST-REx-ID: 13239 |

Van Der Plas, T. L., Vogels, T. P., & Manohar, S. G. (2022). Predictive learning enables neural networks to learn complex working memory tasks. In Proceedings of Machine Learning Research (Vol. 199, pp. 518–531). ML Research Press.

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2022 | Preprint | IST-REx-ID: 11366 |

Lechner, M., Amini, A., Rus, D., & Henzinger, T. A. (n.d.). Revisiting the adversarial robustness-accuracy tradeoff in robot learning. arXiv. https://doi.org/10.48550/arXiv.2204.07373

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2022 | Journal Article | IST-REx-ID: 11432 |

Schreck, C., & Wojtan, C. (2022). Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method. Computer Graphics Forum. Wiley. https://doi.org/10.1111/cgf.14478

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2022 | Journal Article | IST-REx-ID: 10737 |

Takhanov, R., & Kolmogorov, V. (2022). Combining pattern-based CRFs and weighted context-free grammars. Intelligent Data Analysis. IOS Press. https://doi.org/10.3233/IDA-205623

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2022 | Journal Article | IST-REx-ID: 10826 |

Valperga, G., & de Bono, M. (2022). Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.68040

2022 | Journal Article | IST-REx-ID: 10887 |

Ivanov, G., & Naszódi, M. (2022). Functional John ellipsoids. Journal of Functional Analysis. Elsevier. https://doi.org/10.1016/j.jfa.2022.109441

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2022 | Journal Article | IST-REx-ID: 11155 |

Obr, M., Hagen, W. J. H., Dick, R. A., Yu, L., Kotecha, A., & Schur, F. K. (2022). Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs. Journal of Structural Biology. Elsevier. https://doi.org/10.1016/j.jsb.2022.107852

2022 | Journal Article | IST-REx-ID: 12110 |

Henheik, S. J., & Tumulka, R. (2022). Interior-boundary conditions for the Dirac equation at point sources in three dimensions. Journal of Mathematical Physics. AIP Publishing. https://doi.org/10.1063/5.0104675

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2022 | Journal Article | IST-REx-ID: 12332 |

Mlynarski, W. F., & Tkačik, G. (2022). Efficient coding theory of dynamic attentional modulation. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.3001889

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2022 | Journal Article | IST-REx-ID: 12142 |

Ojavee, S. E., Kutalik, Z., & Robinson, M. R. (2022). Liability-scale heritability estimation for biobank studies of low-prevalence disease. The American Journal of Human Genetics. Elsevier. https://doi.org/10.1016/j.ajhg.2022.09.011

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2022 | Journal Article | IST-REx-ID: 12147 |

Hasani, R., Lechner, M., Amini, A., Liebenwein, L., Ray, A., Tschaikowski, M., … Rus, D. (2022). Closed-form continuous-time neural networks. Nature Machine Intelligence. Springer Nature. https://doi.org/10.1038/s42256-022-00556-7

[Published Version] View | Files available | DOI | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 12174 |

Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.

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2022 | Journal Article | IST-REx-ID: 12227 |

Kovačič, S., Schafzahl, B., Matsko, N. B., Gruber, K., Schmuck, M., Koller, S., … Slugovc, C. (2022). Carbon foams via ring-opening metathesis polymerization of emulsion templates: A facile method to make carbon current collectors for battery applications. ACS Applied Energy Materials. American Chemical Society. https://doi.org/10.1021/acsaem.2c02787

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2022 | Journal Article | IST-REx-ID: 12233 |

Doan, N., Hashemi, S. A., Mondelli, M., & Gross, W. J. (2022). Decoding Reed-Muller codes with successive codeword permutations. IEEE Transactions on Communications. Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/tcomm.2022.3211101

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2022 | Journal Article | IST-REx-ID: 12239 |

Johnson, A. J., Kaufmann, W., Sommer, C. M., Costanzo, T., Dahhan, D. A., Bednarek, S. Y., & Friml, J. (2022). Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution. Molecular Plant. Elsevier. https://doi.org/10.1016/j.molp.2022.09.003

2022 | Journal Article | IST-REx-ID: 12277 |

Brückner, D., Schmitt, M., Fink, A., Ladurner, G., Flommersfeld, J., Arlt, N., … Broedersz, C. P. (2022). Geometry adaptation of protrusion and polarity dynamics in confined cell migration. Physical Review X. American Physical Society. https://doi.org/10.1103/physrevx.12.031041

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2022 | Conference Paper | IST-REx-ID: 12299 |

Iofinova, E. B., Peste, E.-A., Kurtz, M., & Alistarh, D.-A. (2022). How well do sparse ImageNet models transfer? In 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (pp. 12256–12266). New Orleans, LA, United States: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/cvpr52688.2022.01195

2022 | Journal Article | IST-REx-ID: 12290 |

Cipolloni, G., Erdös, L., & Schröder, D. J. (2022). Optimal multi-resolvent local laws for Wigner matrices. Electronic Journal of Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/22-ejp838

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2022 | Conference Paper | IST-REx-ID: 14168 |

Rahaman, N., Weiss, M., Locatello, F., Pal, C., Bengio, Y., Schölkopf, B., … Ballas, N. (2022). Neural attentive circuits. In 36th Conference on Neural Information Processing Systems (Vol. 35). New Orleans, United States.

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2022 | Conference Paper | IST-REx-ID: 12452 |

Rao, P., B R, M., Fox, G., Weyrich, T., Bickel, B., Seidel, H.-P., … Elgharib, M. (2022). VoRF: Volumetric Relightable Faces. In 33rd British Machine Vision Conference. London, United Kingdom: British Machine Vision Association and Society for Pattern Recognition.

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2022 | Journal Article | IST-REx-ID: 11478 |

Bartalska, K., Hübschmann, V., Korkut, M., Cubero, R. J., Venturino, A., Rössler, K., … Siegert, S. (2022). A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation. IScience. Elsevier. https://doi.org/10.1016/j.isci.2022.104580

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2022 | Thesis | IST-REx-ID: 12401 |

Tasciyan, S. (2022). Role of microenvironment heterogeneity in cancer cell invasion. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12401

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2022 | Preprint | IST-REx-ID: 11943 |

Velicky, P., Miguel Villalba, E., Michalska, J. M., Wei, D., Lin, Z., Watson, J., … Danzl, J. G. (n.d.). Saturated reconstruction of living brain tissue. bioRxiv. Cold Spring Harbor Laboratory. https://doi.org/10.1101/2022.03.16.484431

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2022 | Preprint | IST-REx-ID: 11950 |

Michalska, J. M., Lyudchik, J., Velicky, P., Korinkova, H., Watson, J., Cenameri, A., … Danzl, J. G. (n.d.). Uncovering brain tissue architecture across scales with super-resolution light microscopy. bioRxiv. Cold Spring Harbor Laboratory. https://doi.org/10.1101/2022.08.17.504272

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2021 | Journal Article | IST-REx-ID: 10180 |

Hoefler, T., Alistarh, D.-A., Ben-Nun, T., Dryden, N., & Peste, E.-A. (2021). Sparsity in deep learning: Pruning and growth for efficient inference and training in neural networks. Journal of Machine Learning Research. Journal of Machine Learning Research.

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2021 | Conference Paper | IST-REx-ID: 10668 |

Babaiee, Z., Hasani, R., Lechner, M., Rus, D., & Grosu, R. (2021). On-off center-surround receptive fields for accurate and robust image classification. In Proceedings of the 38th International Conference on Machine Learning (Vol. 139, pp. 478–489). Virtual: ML Research Press.

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2021 | Preprint | IST-REx-ID: 10912 |

Lombardi, F., Pepic, S., Shriki, O., Tkačik, G., & De Martino, D. (n.d.). Quantifying the coexistence of neuronal oscillations and avalanches. arXiv. https://doi.org/10.48550/ARXIV.2108.06686

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2021 | Journal Article | IST-REx-ID: 11500 |

Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely Deep Field: The cosmic web in emission at high redshift. Astronomy & Astrophysics. 647, A107.

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2021 | Journal Article | IST-REx-ID: 11523 |

Matthee, J. J., Sobral, D., Hayes, M., Pezzulli, G., Gronke, M., Schaerer, D., … Amorín, R. (2021). The X-SHOOTER Lyman α survey at z = 2 (XLS-z2) I: What makes a galaxy a Lyman α emitter? Monthly Notices of the Royal Astronomical Society. Oxford University Press. https://doi.org/10.1093/mnras/stab1304

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2021 | Journal Article | IST-REx-ID: 11525 |

Gallego, S. G., Cantalupo, S., Sarpas, S., Duboeuf, B., Lilly, S., Pezzulli, G., … Mauerhofer, V. (2021). Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations. Monthly Notices of the Royal Astronomical Society. Oxford University Press. https://doi.org/10.1093/mnras/stab796

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2021 | Conference Paper | IST-REx-ID: 9824

Čomić, L., Zrour, R., Largeteau-Skapin, G., Biswas, R., & Andres, E. (2021). Body centered cubic grid - coordinate system and discrete analytical plane definition. In Discrete Geometry and Mathematical Morphology (Vol. 12708, pp. 152–163). Uppsala, Sweden: Springer Nature. https://doi.org/10.1007/978-3-030-76657-3_10

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2021 | Journal Article | IST-REx-ID: 8582 |

Li, H., von Wangenheim, D., Zhang, X., Tan, S., Darwish-Miranda, N., Naramoto, S., … Friml, J. (2021). Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana. New Phytologist. Wiley. https://doi.org/10.1111/nph.16887

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2021 | Journal Article | IST-REx-ID: 8430 |

Ojavee, S. E., Kousathanas, A., Trejo Banos, D., Orliac, E. J., Patxot, M., Lall, K., … Robinson, M. R. (2021). Genomic architecture and prediction of censored time-to-event phenotypes with a Bayesian genome-wide analysis. Nature Communications. Nature Research. https://doi.org/10.1038/s41467-021-22538-w

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2021 | Journal Article | IST-REx-ID: 8928 |

Arnoux, S., Fraisse, C., & Sauvage, C. (2021). Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology. Wiley. https://doi.org/10.1111/jeb.13723

2021 | Journal Article | IST-REx-ID: 9244 |

Hankeova, S., Salplachta, J., Zikmund, T., Kavkova, M., Van Hul, N., Brinek, A., … Andersson, E. R. (2021). DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.60916

2021 | Journal Article | IST-REx-ID: 9241 |

Elek, O., Zhang, R., Sumin, D., Myszkowski, K., Bickel, B., Wilkie, A., … Weyrich, T. (2021). Robust and practical measurement of volume transport parameters in solid photo-polymer materials for 3D printing. Optics Express. The Optical Society. https://doi.org/10.1364/OE.406095

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2021 | Journal Article | IST-REx-ID: 9295 |

Arroyo Guevara, A. M., Mcquillan, D., Richter, R. B., Salazar, G., & Sullivan, M. (2021). Drawings of complete graphs in the projective plane. Journal of Graph Theory. Wiley. https://doi.org/10.1002/jgt.22665

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2021 | Journal Article | IST-REx-ID: 9294 |

Gärtner, F. R., & Sixt, M. K. (2021). Engaging the front wheels to drive through fibrous terrain. Developmental Cell. Elsevier. https://doi.org/10.1016/j.devcel.2021.03.002

2021 | Journal Article | IST-REx-ID: 9376 |

Zhang, R., Auzinger, T., & Bickel, B. (2021). Computational design of planar multistable compliant structures. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3453477

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2021 | Journal Article | IST-REx-ID: 9412 |

Cipolloni, G., Erdös, L., & Schröder, D. J. (2021). Fluctuation around the circular law for random matrices with real entries. Electronic Journal of Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/21-EJP591

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2021 | Journal Article | IST-REx-ID: 9629 |

Yang, Q., Xue, S., Chan, C. J., Rempfler, M., Vischi, D., Maurer-Gutierrez, F., … Liberali, P. (2021). Cell fate coordinates mechano-osmotic forces in intestinal crypt formation. Nature Cell Biology. Springer Nature. https://doi.org/10.1038/s41556-021-00700-2

2021 | Journal Article | IST-REx-ID: 9820 |

Serrano, A., Chen, B., Wang, C., Piovarci, M., Seidel, H. P., Didyk, P., & Myszkowski, K. (2021). The effect of shape and illumination on material perception: Model and applications. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3450626.3459813

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