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208 Publications


2022 | Journal Article | IST-REx-ID: 12275 | OA
Specific N-glycans regulate an extracellular adhesion complex during somatosensory dendrite patterning
M. Rahman, N. Ramirez, C.A. Diaz‐Balzac, H.E. Bülow, EMBO Reports 23 (2022).
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 12120
Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth
H. Xiao, Y. Hu, Y. Wang, J. Cheng, J. Wang, G. Chen, Q. Li, S. Wang, Y. Wang, S.-S. Wang, Y. Wang, W. Xuan, Z. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Developmental Cell 57 (2022) 2638–2651.e6.
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2022 | Journal Article | IST-REx-ID: 12117 | OA
Assessing human iPSC-derived microglia identity and function by immunostaining, phagocytosis, calcium activity, and inflammation assay
V. Hübschmann, M. Korkut, S. Siegert, STAR Protocols 3 (2022).
[Published Version] View | Files available | DOI
 

2022 | Journal Article | IST-REx-ID: 12272 | OA
Plan your trip before you leave: The neutrophils’ search-and-run journey
J.A. Stopp, M.K. Sixt, Journal of Cell Biology 221 (2022).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 11373 | OA
In vitro reconstitution of Escherichia coli divisome activation
P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 10787 | OA
The response of a metapopulation to a changing environment
N.H. Barton, O.O. Olusanya, Philosophical Transactions of the Royal Society B: Biological Sciences 377 (2022).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 15268 | OA
Evolutionary and structural constraints influencing apolipoprotein A‐I amyloid behavior
R.A. Gisonno, T. Masson, N.A. Ramella, E.E. Barrera, V. Romanowski, M.A. Tricerri, Proteins: Structure, Function, and Bioinformatics 90 (2022) 258–269.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 11160 | OA
CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories
C.E. Villa, C. Cheroni, C. Dotter, A. López-Tóbon, B. Oliveira, R. Sacco, A.Ç. Yahya, J. Morandell, M. Gabriele, M. Tavakoli, J. Lyudchik, C.M. Sommer, M. Gabitto, J.G. Danzl, G. Testa, G. Novarino, Cell Reports 39 (2022).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 10337
PLCγ1 promotes phase separation of T cell signaling components
L. Zeng, I. Palaia, A. Šarić, X. Su, Journal of Cell Biology 220 (2021).
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2021 | Journal Article | IST-REx-ID: 11052
Identification of long-lived proteins in the mitochondria reveals increased stability of the electron transport chain
S. Krishna, R. Arrojo e Drigo, J.S. Capitanio, R. Ramachandra, M. Ellisman, M. Hetzer, Developmental Cell 56 (2021) P2952–2965.e9.
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2021 | Journal Article | IST-REx-ID: 12585 | OA
Health and sustainability of glaciers in High Mountain Asia
E. Miles, M. McCarthy, A. Dehecq, M. Kneib, S. Fugger, F. Pellicciotti, Nature Communications 12 (2021).
[Published Version] View | DOI | Download Published Version (ext.)
 

2021 | Journal Article | IST-REx-ID: 13356 | OA
Morphology control in crystalline nanoparticle–polymer aggregates
T. Bian, R. Klajn, Annals of the New York Academy of Sciences 1505 (2021) 191–201.
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2021 | Journal Article | IST-REx-ID: 8966 | OA
Reassembling gastrulation
A. Schauer, C.-P.J. Heisenberg, Developmental Biology 474 (2021) 71–81.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9188 | OA
Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond
F. Pauler, Q. Hudson, S. Laukoter, S. Hippenmeyer, Neurochemistry International 145 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9387 | OA
Two linked loci under mutation-selection balance and Muller’s ratchet
K. Khudiakova, T.Y. Neretina, A.S. Kondrashov, Journal of Theoretical Biology 524 (2021).
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 

2021 | Journal Article | IST-REx-ID: 9431 | OA
Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer
M. Obr, C.L. Ricana, N. Nikulin, J.-P.R. Feathers, M. Klanschnig, A. Thader, M.C. Johnson, V.M. Vogt, F.K. Schur, R.A. Dick, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9540 | OA
Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine
M. Prattes, I. Grishkovskaya, V.-V. Hodirnau, I. Rössler, I. Klein, C. Hetzmannseder, G. Zisser, C.C. Gruber, K. Gruber, D. Haselbach, H. Bergler, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9778 | OA
Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses
D.H. Vandael, Y. Okamoto, P.M. Jonas, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 10163 | OA
PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Appel L-M, Franke V, Bruno M, Grishkovskaya I, Kasiliauskaite A, Kaufmann T, Schoeberl UE, Puchinger MG, Kostrhon S, Ebenwaldner C, Sebesta M, Beltzung E, Mechtler K, Lin G, Vlasova A, Leeb M, Pavri R, Stark A, Akalin A, Stefl R, Bernecky C, Djinovic-Carugo K, Slade D. 2021. PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC. Nature Communications. 12(1), 6078.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 10301 | OA
Control of protein synthesis and memory by GluN3A-NMDA receptors through inhibition of GIT1/mTORC1 assembly
M.J. Conde-Dusman, P.N. Dey, Ó. Elía-Zudaire, L.E. Garcia Rabaneda, C. García-Lira, T. Grand, V. Briz, E.R. Velasco, R. Andero Galí, S. Niñerola, A. Barco, P. Paoletti, J.F. Wesseling, F. Gardoni, S.J. Tavalin, I. Perez-Otaño, ELife 10 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 10310 | OA
Cryo-EM structure of a functional monomeric Photosystem I from Thermosynechococcus elongatus reveals red chlorophyll cluster
M.O. Çoruh, A. Frank, H. Tanaka, A. Kawamoto, E. El-Mohsnawy, T. Kato, K. Namba, C. Gerle, M.M. Nowaczyk, G. Kurisu, Communications Biology 4 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 10533 | OA
Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin
J. Choi, D.B. Lyons, D. Zilberman, ELife 10 (2021).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 10834 | OA
Loss of Hem1 disrupts macrophage function and impacts migration, phagocytosis, and integrin-mediated adhesion
S. Stahnke, H. Döring, C. Kusch, D.J.J. de Gorter, S. Dütting, A. Guledani, I. Pleines, M. Schnoor, M.K. Sixt, R. Geffers, M. Rohde, M. Müsken, F. Kage, A. Steffen, J. Faix, B. Nieswandt, K. Rottner, T.E.B. Stradal, Current Biology 31 (2021) 2051–2064.e8.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 10290 | OA
Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data
G.A. Dimchev, B. Amiri, F. Fäßler, M. Falcke, F.K. Schur, Journal of Structural Biology 213 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 8997 | OA
Minimal biophysical model of combined antibiotic action
B. Kavcic, G. Tkačik, M.T. Bollenbach, PLOS Computational Biology 17 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9283 | OA
Local genetic context shapes the function of a gene regulatory network
A.A. Nagy-Staron, K. Tomasek, C. Caruso Carter, E. Sonnleitner, B. Kavcic, T. Paixão, C.C. Guet, ELife 10 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 15151 | OA
Reading the chromatinized genome
A.K. Michael, N.H. Thomä, Cell 184 (2021) 3599–3611.
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2021 | Journal Article | IST-REx-ID: 15264 | OA
The actin-disassembly protein glia maturation factor γ enhances actin remodeling and B cell antigen receptor signaling at the immune synapse
N. Deretic, M. Bolger-Munro, K. Choi, L. Abraham, M.R. Gold, Frontiers in Cell and Developmental Biology 9 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15262 | OA
Dynamics of hunchback translation in real-time and at single-mRNA resolution in the Drosophila embryo
D.J. Vinter, C. Hoppe, T. Minchington, C. Sutcliffe, H.L. Ashe, Development 148 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15276 | OA
The Pleiades are a cluster of fungal effectors that inhibit host defenses
F. Navarrete, N. Grujic, A. Stirnberg, I. Saado, D. Aleksza, M.C. Gallei, H. Adi, A. Alcântara, M. Khan, J. Bindics, M. Trujillo, A. Djamei, PLOS Pathogens 17 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15273 | OA
Incomplete removal of extracellular glutamate controls synaptic transmission and integration at a cerebellar synapse
T.S. Balmer, C. Borges Merjane, L.O. Trussell, ELife 10 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15272 | OA
The CATP-8/P5A-type ATPase functions in multiple pathways during neuronal patterning
L.T.H. Tang, M. Trivedi, J. Freund, C.J. Salazar, M. Rahman, N. Ramirez, G. Lee, Y. Wang, B.D. Grant, H.E. Bülow, PLOS Genetics 17 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9429 | OA
Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, G.A. Dimchev, A. Nicolas, C.M. Sommer, C. Kreuzinger, C. Dotter, L. Knaus, Z. Dobler, E. Cacci, F.K. Schur, J.G. Danzl, G. Novarino, Nature Communications 12 (2021).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 10348 | OA
An ESCRT-III polymerization sequence drives membrane deformation and fission
A.-K. Pfitzner, V. Mercier, X. Jiang, J. Moser von Filseck, B. Baum, A. Šarić, A. Roux, Cell 182 (2020) 1140–1155.e18.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 11056 | OA
Transcriptional and functional changes of the human microvasculature during physiological aging and Alzheimer disease
S. Bersini, R. Arrojo e Drigo, L. Huang, M.N. Shokhirev, M. Hetzer, Advanced Biosystems 4 (2020).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 11055 | OA
Direct reprogramming of human smooth muscle and vascular endothelial cells reveals defects associated with aging and Hutchinson-Gilford progeria syndrome
S. Bersini, R. Schulte, L. Huang, H. Tsai, M. Hetzer, ELife 9 (2020).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 11057 | OA
Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation
H. Kang, M.N. Shokhirev, Z. Xu, S. Chandran, J.R. Dixon, M. Hetzer, Genes & Development 34 (2020) 913–930.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 11058 | OA
Nup93 regulates breast tumor growth by modulating cell proliferation and actin cytoskeleton remodeling
S. Bersini, N.K. Lytle, R. Schulte, L. Huang, G.M. Wahl, M. Hetzer, Life Science Alliance 3 (2020).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 8402 | OA
The mitochondrial carrier pathway transports non-canonical substrates with an odd number of transmembrane segments
H. Rampelt, I. Sucec, B. Bersch, P. Horten, I. Perschil, J.-C. Martinou, M. van der Laan, N. Wiedemann, P. Schanda, N. Pfanner, BMC Biology 18 (2020).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 12189 | OA
AXR1 affects DNA methylation independently of its role in regulating meiotic crossover localization
N. Christophorou, W. She, J. Long, A. Hurel, S. Beaubiat, Y. Idir, M. Tagliaro-Jahns, A. Chambon, V. Solier, D. Vezon, M. Grelon, X. Feng, N. Bouché, C. Mézard, PLOS Genetics 16 (2020).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 8529 | OA
Converting microwave and telecom photons with a silicon photonic nanomechanical interface
G.M. Arnold, M. Wulf, S. Barzanjeh, E. Redchenko, A.R. Rueda Sanchez, W.J. Hease, F. Hassani, J.M. Fink, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8592 | OA
Oncogenic state and cell identity combinatorially dictate the susceptibility of cells within glioma development hierarchy to IGF1R targeting
Tian A, Kang B, Li B, Qiu B, Jiang W, Shao F, Gao Q, Liu R, Cai C, Jing R, Wang W, Chen P, Liang Q, Bao L, Man J, Wang Y, Shi Y, Li J, Yang M, Wang L, Zhang J, Hippenmeyer S, Zhu J, Bian X, Wang Y, Liu C. 2020. Oncogenic state and cell identity combinatorially dictate the susceptibility of cells within glioma development hierarchy to IGF1R targeting. Advanced Science. 7(21), 2001724.
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8568 | OA
Persistent and reversible solid iodine electrodeposition in nanoporous carbons
C. Prehal, H. Fitzek, G. Kothleitner, V. Presser, B. Gollas, S.A. Freunberger, Q. Abbas, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8744 | OA
Cysteine oxidation and disulfide formation in the ribosomal exit tunnel
L. Schulte, J. Mao, J. Reitz, S. Sreeramulu, D. Kudlinzki, V.-V. Hodirnau, J. Meier-Credo, K. Saxena, F. Buhr, J.D. Langer, M. Blackledge, A.S. Frangakis, C. Glaubitz, H. Schwalbe, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8767 | OA
The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 8971 | OA
Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction
F. Fäßler, G.A. Dimchev, V.-V. Hodirnau, W. Wan, F.K. Schur, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Journal Article | IST-REx-ID: 14125 | OA
SCIM: Universal single-cell matching with unpaired feature sets
Stark SG et al. 2020. SCIM: Universal single-cell matching with unpaired feature sets. Bioinformatics. 36(Supplement_2), i919–i927.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Research Data | IST-REx-ID: 8951 | OA
Sequences of gene regulatory network permutations for the article "Local genetic context shapes the function of a gene regulatory network"
A.A. Nagy-Staron, (2020).
[Published Version] View | Files available | DOI
 

2020 | Journal Article | IST-REx-ID: 15037 | OA
TOLs function as ubiquitin receptors in the early steps of the ESCRT pathway in higher plants
J. Moulinier-Anzola, M. Schwihla, L. De-Araújo, C. Artner, L. Jörg, N. Konstantinova, C. Luschnig, B. Korbei, Molecular Plant 13 (2020) 717–731.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 15036 | OA
Molecular recognition at septin interfaces: The switches hold the key
H.V.D. Rosa, D.A. Leonardo, G. Brognara, J. Brandão-Neto, H. D’Muniz Pereira, A.P.U. Araújo, R.C. Garratt, Journal of Molecular Biology 432 (2020) 5784–5801.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 15153 | OA
Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing
J.L. Fribourgh, A. Srivastava, C.R. Sandate, A.K. Michael, P.L. Hsu, C. Rakers, L.T. Nguyen, M.R. Torgrimson, G.C.G. Parico, S. Tripathi, N. Zheng, G.C. Lander, T. Hirota, F. Tama, C.L. Partch, ELife 9 (2020).
[Published Version] View | DOI | Download Published Version (ext.)
 

2020 | Journal Article | IST-REx-ID: 8434 | OA
Lamellipodin tunes cell migration by stabilizing protrusions and promoting adhesion formation
G.A. Dimchev, B. Amiri, A.C. Humphries, M. Schaks, V. Dimchev, T.E.B. Stradal, J. Faix, M. Krause, M. Way, M. Falcke, K. Rottner, Journal of Cell Science 133 (2020).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 10354 | OA
Changes in ESCRT-III filament geometry drive membrane remodelling and fission in silico
L. Harker-Kirschneck, B. Baum, A. Šarić, BMC Biology 17 (2019).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 10355 | OA
Minimal coarse-grained models for molecular self-organisation in biology
A.E. Hafner, J. Krausser, A. Šarić, Current Opinion in Structural Biology 58 (2019) 43–52.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 11061 | OA
Visualization of long-lived proteins reveals age mosaicism within nuclei of postmitotic cells
B.H. Toyama, R. Arrojo e Drigo, V. Lev-Ram, R. Ramachandra, T.J. Deerinck, C. Lechene, M.H. Ellisman, M. Hetzer, Journal of Cell Biology 218 (2019) 433–444.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 11062 | OA
Age mosaicism across multiple scales in adult tissues
R. Arrojo e Drigo, V. Lev-Ram, S. Tyagi, R. Ramachandra, T. Deerinck, E. Bushong, S. Phan, V. Orphan, C. Lechene, M.H. Ellisman, M. Hetzer, Cell Metabolism 30 (2019) 343–351.e3.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 11059
Coaching from the sidelines: The nuclear periphery in genome regulation
A. Buchwalter, J.M. Kaneshiro, M. Hetzer, Nature Reviews Genetics 20 (2019) 39–50.
View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8405 | OA
Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex
D.F. Gauto, L.F. Estrozi, C.D. Schwieters, G. Effantin, P. Macek, R. Sounier, A.C. Sivertsen, E. Schmidt, R. Kerfah, G. Mas, J.-P. Colletier, P. Güntert, A. Favier, G. Schoehn, P. Schanda, J. Boisbouvier, Nature Communications 10 (2019).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8409
Studying intact bacterial peptidoglycan by proton-detected NMR spectroscopy at 100 kHz MAS frequency
C. Bougault, I. Ayala, W. Vollmer, J.-P. Simorre, P. Schanda, Journal of Structural Biology 206 (2019) 66–72.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 9060 | OA
Activity-controlled annealing of colloidal monolayers
S. Ramananarivo, E. Ducrot, J.A. Palacci, Nature Communications 10 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC | arXiv
 

2019 | Journal Article | IST-REx-ID: 9018 | OA
Design on a rational basis of high-affinity peptides inhibiting the histone chaperone ASF1
Bakail MM, Gaubert A, Andreani J, Moal G, Pinna G, Boyarchuk E, Gaillard M-C, Courbeyrette R, Mann C, Thuret J-Y, Guichard B, Murciano B, Richet N, Poitou A, Frederic C, Le Du M-H, Agez M, Roelants C, Gurard-Levin ZA, Almouzni G, Cherradi N, Guerois R, Ochsenbein F. 2019. Design on a rational basis of high-affinity peptides inhibiting the histone chaperone ASF1. Cell Chemical Biology. 26(11), 1573–1585.e10.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 12192 | OA
Natural depletion of histone H1 in sex cells causes DNA demethylation, heterochromatin decondensation and transposon activation
S. He, M. Vickers, J. Zhang, X. Feng, ELife 8 (2019).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 12190
Natural variation in TBP-ASSOCIATED FACTOR 4b controls meiotic crossover and germline transcription in Arabidopsis
E.J. Lawrence, H. Gao, A.J. Tock, C. Lambing, A.R. Blackwell, X. Feng, I.R. Henderson, Current Biology 29 (2019) 2676–2686.e3.
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2019 | Journal Article | IST-REx-ID: 11060 | OA
Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress
A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, M. Hetzer, ELife 8 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Thesis | IST-REx-ID: 6891 | OA
The implication of cytoskeletal dynamics on leukocyte migration
A. Kopf, The Implication of Cytoskeletal Dynamics on Leukocyte Migration, Institute of Science and Technology Austria, 2019.
[Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 11063 | OA
Tpr regulates the total number of nuclear pore complexes per cell nucleus
A. McCloskey, A. Ibarra, M. Hetzer, Genes & Development 32 (2018) 1321–1331.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 8440
The antibiotic cyclomarin blocks arginine-phosphate–induced millisecond dynamics in the N-terminal domain of ClpC1 from Mycobacterium tuberculosis
K. Weinhäupl, M. Brennich, U. Kazmaier, J. Lelievre, L. Ballell, A. Goldberg, P. Schanda, H. Fraga, Journal of Biological Chemistry 293 (2018) 8379–8393.
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2018 | Journal Article | IST-REx-ID: 8436
Structural basis of membrane protein chaperoning through the mitochondrial intermembrane space
K. Weinhäupl, C. Lindau, A. Hessel, Y. Wang, C. Schütze, T. Jores, L. Melchionda, B. Schönfisch, H. Kalbacher, B. Bersch, D. Rapaport, M. Brennich, K. Lindorff-Larsen, N. Wiedemann, P. Schanda, Cell 175 (2018) 1365–1379.e25.
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2018 | Journal Article | IST-REx-ID: 8438
Dynamics and interactions of AAC3 in DPC are not functionally relevant
V. Kurauskas, A. Hessel, F. Dehez, C. Chipot, B. Bersch, P. Schanda, Nature Structural & Molecular Biology 25 (2018) 745–747.
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2018 | Journal Article | IST-REx-ID: 13374 | OA
Reversible chromism of spiropyran in the cavity of a flexible coordination cage
D. Samanta, D. Galaktionova, J. Gemen, L.J.W. Shimon, Y. Diskin-Posner, L. Avram, P. Král, R. Klajn, Nature Communications 9 (2018).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 10880 | OA
Significance of whole-genome duplications on the emergence of evolutionary novelties
M. Yuuta, K. Koshiba-Takeuchi, Briefings in Functional Genomics 17 (2018) 329–338.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 14284 | OA
Structure and mechanism of the two-component α-helical pore-forming toxin YaxAB
B. Bräuning, E. Bertosin, F.M. Praetorius, C. Ihling, A. Schatt, A. Adler, K. Richter, A. Sinz, H. Dietz, M. Groll, Nature Communications 9 (2018).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 10370 | OA
Mechanical force induces mitochondrial fission
S.C.J. Helle, Q. Feng, M.J. Aebersold, L. Hirt, R.R. Grüter, A. Vahid, A. Sirianni, S. Mostowy, J.G. Snedeker, A. Šarić, T. Idema, T. Zambelli, B. Kornmann, ELife 6 (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 11066 | OA
Nup98 recruits the Wdr82–Set1A/COMPASS complex to promoters to regulate H3K4 trimethylation in hematopoietic progenitor cells
T.M. Franks, A. McCloskey, M.N. Shokhirev, C. Benner, A. Rathore, M. Hetzer, Genes & Development 31 (2017) 2222–2234.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 11067 | OA
Nup153 interacts with Sox2 to enable bimodal gene regulation and maintenance of neural progenitor cells
T. Toda, J.Y. Hsu, S.B. Linker, L. Hu, S.T. Schafer, J. Mertens, F.V. Jacinto, M. Hetzer, F.H. Gage, Cell Stem Cell 21 (2017) 618–634.e7.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 11065 | OA
Nucleolar expansion and elevated protein translation in premature aging
A. Buchwalter, M. Hetzer, Nature Communications 8 (2017).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 14005 | OA
Dynamics of valence-shell electrons and nuclei probed by strong-field holography and rescattering
S.G. Walt, N. Bhargava Ram, M. Atala, N.I. Shvetsov-Shilovski, A. von Conta, D.R. Baykusheva, M. Lein, H.J. Wörner, Nature Communications 8 (2017).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 15154 | OA
Structural dynamics of RbmA governs plasticity of Vibrio cholerae biofilms
J.C. Fong, A. Rogers, A.K. Michael, N.C. Parsley, W.-C. Cornell, Y.-C. Lin, P.K. Singh, R. Hartmann, K. Drescher, E. Vinogradov, L.E. Dietrich, C.L. Partch, F.H. Yildiz, ELife 6 (2017).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 15155 | OA
A slow conformational switch in the BMAL1 transactivation domain modulates circadian rhythms
C.L. Gustafson, N.C. Parsley, H. Asimgil, H.-W. Lee, C. Ahlbach, A.K. Michael, H. Xu, O.L. Williams, T.L. Davis, A.C. Liu, C.L. Partch, Molecular Cell 66 (2017) 447–457.e7.
[Published Version] View | DOI | Download Published Version (ext.)
 

2016 | Journal Article | IST-REx-ID: 11072 | OA
p120-catenin prevents multinucleation through control of MKLP1-dependent RhoA activity during cytokinesis
R.A.H. van de Ven, J.S. de Groot, D. Park, R. van Domselaar, D. de Jong, K. Szuhai, E. van der Wall, O.M. Rueda, H.R. Ali, C. Caldas, P.J. van Diest, M. Hetzer, E. Sahai, P.W.B. Derksen, Nature Communications 7 (2016).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 11071 | OA
Evolution of a transcriptional regulator from a transmembrane nucleoporin
T.M. Franks, C. Benner, I. Narvaiza, M.C.N. Marchetto, J.M. Young, H.S. Malik, F.H. Gage, M. Hetzer, Genes & Development 30 (2016) 1155–1171.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 11069 | OA
Nuclear envelope rupture is induced by actin-based nucleus confinement
E.M. Hatch, M. Hetzer, Journal of Cell Biology 215 (2016) 27–36.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 11070 | OA
Nucleoporin-mediated regulation of cell identity genes
A. Ibarra, C. Benner, S. Tyagi, J. Cool, M. Hetzer, Genes & Development 30 (2016) 2253–2258.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11079 | OA
Directly reprogrammed human neurons retain aging-associated transcriptomic signatures and reveal age-related nucleocytoplasmic defects
J. Mertens, A.C.M. Paquola, M. Ku, E. Hatch, L. Böhnke, S. Ladjevardi, S. McGrath, B. Campbell, H. Lee, J.R. Herdy, J.T. Gonçalves, T. Toda, Y. Kim, J. Winkler, J. Yao, M. Hetzer, F.H. Gage, Cell Stem Cell 17 (2015) 705–718.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11077 | OA
The nucleoporin Nup153 regulates embryonic stem cell pluripotency through gene silencing
F.V. Jacinto, C. Benner, M. Hetzer, Genes & Development 29 (2015) 1224–1238.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11078 | OA
Integrated transcriptome and proteome analyses reveal organ-specific proteome deterioration in old rats
A. Ori, B.H. Toyama, M.S. Harris, T. Bock, M. Iskar, P. Bork, N.T. Ingolia, M. Hetzer, M. Beck, Cell Systems 1 (2015) P224-237.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11075
The nucleoporin gp210/Nup210 controls muscle differentiation by regulating nuclear envelope/ER homeostasis
J.S. Gomez-Cavazos, M. Hetzer, Journal of Cell Biology 208 (2015) 671–681.
[Published Version] View | DOI | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11076 | OA
Nuclear pore proteins and the control of genome functions
A. Ibarra, M. Hetzer, Genes & Development 29 (2015) 337–349.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11073 | OA
Linking micronuclei to chromosome fragmentation
E.M. Hatch, M. Hetzer, Cell 161 (2015) 1502–1504.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 11074 | OA
Chromothripsis
E.M. Hatch, M. Hetzer, Current Biology 25 (2015) PR397-R399.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 8456
Observing the overall rocking motion of a protein in a crystal
P. Ma, Y. Xue, N. Coquelle, J.D. Haller, T. Yuwen, I. Ayala, O. Mikhailovskii, D. Willbold, J.-P. Colletier, N.R. Skrynnikov, P. Schanda, Nature Communications 6 (2015).
[Published Version] View | DOI
 

2015 | Journal Article | IST-REx-ID: 12196
The chromatin remodeler SPLAYED negatively regulates SNC1-mediated immunity
K.C.M. Johnson, S. Xia, X. Feng, X. Li, Plant and Cell Physiology 56 (2015) 1616–1623.
View | DOI | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 14016 | OA
Observation of laser-induced electronic structure in oriented polyatomic molecules
P.M. Kraus, O.I. Tolstikhin, D.R. Baykusheva, A. Rupenyan, J. Schneider, C.Z. Bisgaard, T. Morishita, F. Jensen, L.B. Madsen, H.J. Wörner, Nature Communications 6 (2015).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Journal Article | IST-REx-ID: 15160 | OA
Cancer/Testis antigen PASD1 silences the circadian clock
A.K. Michael, S.L. Harvey, P.J. Sammons, A.P. Anderson, H.M. Kopalle, A.H. Banham, C.L. Partch, Molecular Cell 58 (2015) 743–754.
[Published Version] View | DOI | Download Published Version (ext.)
 

2015 | Journal Article | IST-REx-ID: 15159
Cytosolic BMAL1 moonlights as a translation factor
A.K. Michael, H. Asimgil, C.L. Partch, Trends in Biochemical Sciences 40 (2015) 489–490.
View | DOI
 

2014 | Journal Article | IST-REx-ID: 10815 | OA
Molecular and cellular mechanisms of development underlying congenital diseases
M. Hashimoto, H. Morita, N. Ueno, Congenital Anomalies 54 (2014) 1–7.
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2014 | Journal Article | IST-REx-ID: 11080 | OA
Nuclear pores set the speed limit for mitosis
A. Buchwalter, M. Hetzer, Cell 156 (2014) 868–869.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2014 | Journal Article | IST-REx-ID: 11082 | OA
Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics
A.L. Buchwalter, Y. Liang, M. Hetzer, Molecular Biology of the Cell 25 (2014) 2472–2484.
[Published Version] View | DOI | Download Published Version (ext.)
 

2014 | Journal Article | IST-REx-ID: 11081 | OA
Breaching the nuclear envelope in development and disease
E. Hatch, M. Hetzer, Journal of Cell Biology 205 (2014) 133–141.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2014 | Journal Article | IST-REx-ID: 8459
Relax: The analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data
S. Morin, T.E. Linnet, M. Lescanne, P. Schanda, G.S. Thompson, M. Tollinger, K. Teilum, S. Gagné, D. Marion, C. Griesinger, M. Blackledge, E.J. d’Auvergne, Bioinformatics 30 (2014) 2219–2220.
View | Files available | DOI
 

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