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506 Publications

2023 | Thesis | IST-REx-ID: 12491 |

Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography
B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12809 |

Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning
C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 10758 |

1H NMR chemical exchange techniques reveal local and global effects of oxidized cytosine derivatives
R.C.A. Dubini, E. Korytiaková, T. Schinkel, P. Heinrichs, T. Carell, P. Rovo, ACS Physical Chemistry Au 2 (2022) 237–246.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2022 | Journal Article | IST-REx-ID: 11490 |

Deciphering stellar metallicities in the early universe: Case study of a young galaxy at z = 4.77 in the MUSE eXtremely Deep Field
J.J. Matthee, A. Feltre, M. Maseda, T. Nanayakkara, L. Boogaard, R. Bacon, A. Verhamme, F. Leclercq, H. Kusakabe, T. Urrutia, L. Wisotzki, Astronomy & Astrophysics 660 (2022).

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2022 | Journal Article | IST-REx-ID: 11509 |

EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 10⁴-10⁵⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae
Isobe Y, Ouchi M, Suzuki A, Moriya TJ, Nakajima K, Nomoto K, Rauch M, Harikane Y, Kojima T, Ono Y, Fujimoto S, Inoue AK, Kim JH, Komiyama Y, Kusakabe H, Lee C-H, Maseda M, Matthee JJ, Michel-Dansac L, Nagao T, Nanayakkara T, Nishigaki M, Onodera M, Sugahara Y, Xu Y. 2022. EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 10⁴-10⁵⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae. The Astrophysical Journal. 925(2), 111.

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2022 | Journal Article | IST-REx-ID: 11713 |

Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli
N. Nikolic, M. Sauert, T.G. Albanese, I. Moll, BMC Research Notes 15 (2022).

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2022 | Conference Paper | IST-REx-ID: 11918

The complexity of average-case dynamic subgraph counting
M.H. Henzinger, A. Lincoln, B. Saha, in:, 33rd Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2022, pp. 459–498.

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2022 | Journal Article | IST-REx-ID: 12581 |

Intensified paraglacial slope failures due to accelerating downwasting of a temperate glacier in Mt. Gongga, southeastern Tibetan Plateau
Y. Zhong, Q. Liu, M. Westoby, Y. Nie, F. Pellicciotti, B. Zhang, J. Cai, G. Liu, H. Liao, X. Lu, Earth Surface Dynamics 10 (2022) 23–42.

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2022 | Journal Article | IST-REx-ID: 12574 |

Sub-seasonal variability of supraglacial ice cliff melt rates and associated processes from time-lapse photogrammetry
M. Kneib, E.S. Miles, P. Buri, S. Fugger, M. McCarthy, T.E. Shaw, Z. Chuanxi, M. Truffer, M.J. Westoby, W. Yang, F. Pellicciotti, The Cryosphere 16 (2022) 4701–4725.

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2022 | Conference Abstract | IST-REx-ID: 12894 |

Where is the sweet spot? A procurement story of general purpose compute nodes
A. Schlögl, A. Hornoiu, S. Elefante, S. Stadlbauer, in:, ASHPC22 - Austrian-Slovenian HPC Meeting 2022, EuroCC Austria c/o Universität Wien, 2022, p. 7.

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2022 | Journal Article | IST-REx-ID: 10583 |

Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density
S. Struk, L. Braem, C. Matthys, A. Walton, N. Vangheluwe, S. Van Praet, L. Jiang, P. Baster, C. De Cuyper, F.-D. Boyer, E. Stes, T. Beeckman, J. Friml, K. Gevaert, S. Goormachtig, Plant & Cell Physiology 63 (2022) 104–119.

2022 | Journal Article | IST-REx-ID: 10702 |

Blood-based epigenome-wide analyses of cognitive abilities
McCartney DL, Hillary RF, Conole ELS, Banos DT, Gadd DA, Walker RM, Nangle C, Flaig R, Campbell A, Murray AD, Maniega SM, Valdés-Hernández MDC, Harris MA, Bastin ME, Wardlaw JM, Harris SE, Porteous DJ, Tucker-Drob EM, McIntosh AM, Evans KL, Deary IJ, Cox SR, Robinson MR, Marioni RE. 2022. Blood-based epigenome-wide analyses of cognitive abilities. Genome Biology. 23(1), 26.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10714 |

A translation control module coordinates germline stem cell differentiation with ribosome biogenesis during Drosophila oogenesis
E.T. Martin, P. Blatt, E. Ngyuen, R. Lahr, S. Selvam, H.A.M. Yoon, T. Pocchiari, S. Emtenani, D.E. Siekhaus, A. Berman, G. Fuchs, P. Rangan, Developmental Cell 57 (2022) 883–900.e10.

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2022 | Journal Article | IST-REx-ID: 10731 |

Infection dynamics of COVID-19 virus under lockdown and reopening
J. Svoboda, J. Tkadlec, A. Pavlogiannis, K. Chatterjee, M.A. Nowak, Scientific Reports 12 (2022).

[Published Version] View | Files available | DOI | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 10812

The physiology and genetics of bacterial responses to antibiotic combinations
R. Römhild, M.T. Bollenbach, D.I. Andersson, Nature Reviews Microbiology 20 (2022) 478–490.

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2022 | Journal Article | IST-REx-ID: 10841 |

Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.

2022 | Journal Article | IST-REx-ID: 10926 |

Very short mountings are enough for sperm transfer in Littorina saxatilis
S. Perini, R. Butlin, A.M. Westram, K. Johannesson, Journal of Molluscan Studies 88 (2022).

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2022 | Journal Article | IST-REx-ID: 11341 |

Intron-mediated induction of phenotypic heterogeneity
M. Lukacisin, A. Espinosa-Cantú, M.T. Bollenbach, Nature 605 (2022) 113–118.

2022 | Conference Paper | IST-REx-ID: 11181 |

PathCAS: An efficient middle ground for concurrent search data structures
T.A. Brown, W. Sigouin, D.-A. Alistarh, in:, Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2022, pp. 385–399.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11343 |

Vortices nucleation by inherent fluctuations in nematic liquid crystal cells
E. Aguilera, M.G. Clerc, V. Zambra, Nonlinear Dynamics 108 (2022) 3209–3218.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 11401 |

Unidentified major p-type source in SnSe: Multivacancies
V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12173 |

Atypical enteropathogenic E. coli are associated with disease activity in ulcerative colitis
M. Baumgartner, R. Zirnbauer, S. Schlager, D. Mertens, N. Gasche, B. Sladek, C. Herbold, O. Bochkareva, V. Emelianenko, H. Vogelsang, M. Lang, A. Klotz, B. Moik, A. Makristathis, D. Berry, S. Dabsch, V. Khare, C. Gasche, Gut Microbes 14 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12212 |

Nanoscale alterations in GABAB receptors and GIRK channel organization on the hippocampus of APP/PS1 mice
A. Martín-Belmonte, C. Aguado, R. Alfaro-Ruiz, A.E. Moreno-Martínez, L. de la Ossa, E. Aso, L. Gómez-Acero, R. Shigemoto, Y. Fukazawa, F. Ciruela, R. Luján, Alzheimer’s Research & Therapy 14 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12245 |

Sequential and additive expression of miR-9 precursors control timing of neurogenesis
X. Soto, J. Burton, C.S. Manning, T. Minchington, R. Lea, J. Lee, J. Kursawe, M. Rattray, N. Papalopulu, Development 149 (2022).

2022 | Journal Article | IST-REx-ID: 12252 |

Isolation of an escape-resistant SARS-CoV-2 neutralizing nanobody from a novel synthetic nanobody library
D. Dormeshkin, M. Shapira, S. Dubovik, A. Kavaleuski, M. Katsin, A. Migas, A. Meleshko, S. Semyonov, Frontiers in Immunology 13 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 12262 |

Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1
M. Prattes, I. Grishkovskaya, V.-V. Hodirnau, C. Hetzmannseder, G. Zisser, C. Sailer, V. Kargas, M. Loibl, M. Gerhalter, L. Kofler, A.J. Warren, F. Stengel, D. Haselbach, H. Bergler, Nature Structural & Molecular Biology 29 (2022) 942–953.

2022 | Journal Article | IST-REx-ID: 11489 |

The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein
V. Bilanovičová, N. Rýdza, L. Koczka, M. Hess, E. Feraru, J. Friml, T. Nodzyński, International Journal of Molecular Sciences 23 (2022) 6352.

2022 | Journal Article | IST-REx-ID: 13451 |

A panchromatic study of massive stars in the extremely metal-poor local group dwarf galaxy Leo A
M. Gull, D.R. Weisz, P. Senchyna, N.R. Sandford, Y. Choi, A.F. McLeod, K. El-Badry, Y.L.L. Götberg, K.M. Gilbert, M. Boyer, J.J. Dalcanton, P. GuhaThakurta, S. Goldman, P. Marigo, K.B.W. McQuinn, G. Pastorelli, D.P. Stark, E. Skillman, Y. Ting, B.F. Williams, The Astrophysical Journal 941 (2022).

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2022 | Journal Article | IST-REx-ID: 13993 |

Attosecond photoionization dynamics: from molecules over clusters to the liquid phase
X. Gong, I. Jordan, M. Huppert, S. Heck, D.R. Baykusheva, D. Jelovina, A. Schild, H.J. Wörner, Chimia 76 (2022) 520–528.

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2022 | Journal Article | IST-REx-ID: 12246 |

Improved Lieb–Oxford bound on the indirect and exchange energies
M. Lewin, E.H. Lieb, R. Seiringer, Letters in Mathematical Physics 112 (2022).

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2022 | Journal Article | IST-REx-ID: 14355 |

A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease
Cali E, Lin S-J, Rocca C, Sahin Y, Al Shamsi A, El Chehadeh S, Chaabouni M, Mankad K, Galanaki E, Efthymiou S, Sudhakar S, Athanasiou-Fragkouli A, Celik T, Narli N, Bianca S, Murphy D, Moreira FMDC, Accogli A, Petree C, Huang K, Monastiri K, Edizadeh M, Nardello R, Ognibene M, De Marco P, Ruggieri M, Zara F, Striano P, Sahin Y, Al-Gazali L, Warde MTA, Gerard B, Zifarelli G, Beetz C, Fortuna S, Soler M, Valente EM, Varshney G, Maroofian R, Salpietro V, Houlden H, Grp SynS. 2022. A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease. Genetics in Medicine. 24(10), 2194–2203.

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2022 | Journal Article | IST-REx-ID: 12776 |

Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree 5
T.D. Browning, New York Journal of Mathematics 28 (2022) 1193–1229.

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2022 | Thesis | IST-REx-ID: 10759 |

Analytic and machine learning approaches to composite quantum impurities
W. Rzadkowski, Analytic and Machine Learning Approaches to Composite Quantum Impurities, Institute of Science and Technology Austria, 2022.

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2022 | Journal Article | IST-REx-ID: 15205 |

Polarized x-rays from a magnetar
Taverna R, Turolla R, Muleri F, Heyl J, Zane S, Baldini L, González-Caniulef D, Bachetti M, Rankin J, Caiazzo I, Di Lalla N, Doroshenko V, Errando M, Gau E, Kırmızıbayrak D, Krawczynski H, Negro M, Ng M, Omodei N, Possenti A, Tamagawa T, Uchiyama K, Weisskopf MC, Agudo I, Antonelli LA, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, De Rosa A, Del Monte E, Di Gesu L, Di Marco A, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, La Monaca F, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng SC-Y, O’Dell SL, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Poutanen J, Puccetti S, Ramsey BD, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tavecchio F, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Tsygankov SS, Vink J, Wu K, Xie F. 2022. Polarized x-rays from a magnetar. Science. 378(6620), 646–650.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2022 | Journal Article | IST-REx-ID: 15204 |

Determination of X-ray pulsar geometry with IXPE polarimetry
Doroshenko V, Poutanen J, Tsygankov SS, Suleimanov VF, Bachetti M, Caiazzo I, Costa E, Di Marco A, Heyl J, La Monaca F, Muleri F, Mushtukov AA, Pavlov GG, Ramsey BD, Rankin J, Santangelo A, Soffitta P, Staubert R, Weisskopf MC, Zane S, Agudo I, Antonelli LA, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, De Rosa A, Del Monte E, Di Gesu L, Di Lalla N, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Possenti A, Puccetti S, Ratheesh A, Romani RW, Sgrò C, Slane P, Spandre G, Sunyaev RA, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Turolla R, Vink J, Wu K, Xie F. 2022. Determination of X-ray pulsar geometry with IXPE polarimetry. Nature Astronomy. 6(12), 1433–1443.

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2022 | Journal Article | IST-REx-ID: 15208 |

Probing magnetar emission mechanisms with X-ray spectropolarimetry
I. Caiazzo, D. González-Caniulef, J. Heyl, R. Fernández, Monthly Notices of the Royal Astronomical Society 514 (2022) 5024–5034.

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2022 | Preprint | IST-REx-ID: 11943 |

Saturated reconstruction of living brain tissue
P. Velicky, E. Miguel Villalba, J.M. Michalska, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, BioRxiv (n.d.).

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2021 | Conference Paper | IST-REx-ID: 10054 |

Faster algorithms for bounded liveness in graphs and game graphs
K. Chatterjee, M.H. Henzinger, S.S. Kale, A. Svozil, in:, 48th International Colloquium on Automata, Languages, and Programming, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.

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2021 | Conference Paper | IST-REx-ID: 10072 |

A new notion of commutativity for the algorithmic Lovász Local Lemma
D.G. Harris, F. Iliopoulos, V. Kolmogorov, in:, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.

[Published Version] View | Files available | DOI | arXiv

2021 | Conference Paper | IST-REx-ID: 10218 |

Brief announcement: Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2021.

[Published Version] View | Files available | DOI | arXiv

2021 | Conference Paper | IST-REx-ID: 10217 |

Lower bounds for shared-memory leader election under bounded write contention
D.-A. Alistarh, R. Gelashvili, G. Nadiradze, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.

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2021 | Conference Paper | IST-REx-ID: 10216 |

Brief announcement: Non-blocking dynamic unbounded graphs with worst-case amortized bounds
B. Chatterjee, S. Peri, M. Sa, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.

[Published Version] View | Files available | DOI | arXiv

2021 | Conference Paper | IST-REx-ID: 10219 |

Brief announcement: Sinkless orientation is hard also in the supported LOCAL model
J. Korhonen, A. Paz, J. Rybicki, S. Schmid, J. Suomela, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.

[Published Version] View | Files available | DOI | arXiv

2021 | Book Chapter | IST-REx-ID: 10267

Evaluation of gravitropism in non-seed plants
Y. Zhang, L. Li, J. Friml, in:, E.B. Blancaflor (Ed.), Plant Gravitropism, Springer Nature, 2021, pp. 43–51.

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2021 | Conference Paper | IST-REx-ID: 10688 |

The Civl verifier
B. Kragl, S. Qadeer, in:, P. Ruzica, M.W. Whalen (Eds.), Proceedings of the 21st Conference on Formal Methods in Computer-Aided Design, TU Wien Academic Press, 2021, pp. 143–152.

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2021 | Conference Paper | IST-REx-ID: 10694 |

Infinite-duration all-pay bidding games
G. Avni, I.R. Jecker, D. Zikelic, in:, D. Marx (Ed.), Proceedings of the 2021 ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2021, pp. 617–636.

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2021 | Journal Article | IST-REx-ID: 11500 |

The MUSE Extremely Deep Field: The cosmic web in emission at high redshift
Bacon R, Mary D, Garel T, Blaizot J, Maseda M, Schaye J, Wisotzki L, Conseil S, Brinchmann J, Leclercq F, Abril-Melgarejo V, Boogaard L, Bouché NF, Contini T, Feltre A, Guiderdoni B, Herenz C, Kollatschny W, Kusakabe H, Matthee JJ, Michel-Dansac L, Nanayakkara T, Richard J, Roth M, Schmidt KB, Steinmetz M, Tresse L, Urrutia T, Verhamme A, Weilbacher PM, Zabl J, Zoutendijk SL. 2021. The MUSE Extremely Deep Field: The cosmic web in emission at high redshift. Astronomy & Astrophysics. 647, A107.

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 11525 |

Constraining the cosmic UV background at z > 3 with MUSE Lyman-α emission observations
S.G. Gallego, S. Cantalupo, S. Sarpas, B. Duboeuf, S. Lilly, G. Pezzulli, R.A. Marino, J.J. Matthee, L. Wisotzki, J. Schaye, J. Richard, H. Kusakabe, V. Mauerhofer, Monthly Notices of the Royal Astronomical Society 504 (2021) 16–32.

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2021 | Journal Article | IST-REx-ID: 11663 |

A deamortization approach for dynamic spanner and dynamic maximal matching
A. Bernstein, S. Forster, M.H. Henzinger, ACM Transactions on Algorithms 17 (2021).

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2021 | Conference Paper | IST-REx-ID: 11919 |

New techniques and fine-grained hardness for dynamic near-additive spanners
T. Bergamaschi, M.H. Henzinger, M.P. Gutenberg, V.V. Williams, N. Wein, in:, 32nd Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2021, pp. 1836–1855.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2021 | Conference Paper | IST-REx-ID: 11923 |

Tight bounds for online graph partitioning
M.H. Henzinger, S. Neumann, H. Räcke, S. Schmid, in:, 32nd Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2021, pp. 2799–2818.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2021 | Conference Paper | IST-REx-ID: 11920 |

Dynamic set cover: Improved amortized and worst-case update time
S. Bhattacharya, M.H. Henzinger, D. Nanongkai, X. Wu, in:, 32nd Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2021, pp. 2537–2549.

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2021 | Book Chapter | IST-REx-ID: 9245

Quantifying tissue tension in the granulosa layer after laser surgery
P. Xia, C.-P.J. Heisenberg, in:, R. Dosch (Ed.), Germline Development in the Zebrafish, Humana, 2021, pp. 117–128.

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2021 | Conference Paper | IST-REx-ID: 9604 |

Counting cells of order-k voronoi tessellations in ℝ³ with morse theory
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2021.

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2021 | Journal Article | IST-REx-ID: 12591 |

Anisotropy parameterization development and evaluation for glacier surface albedo retrieval from satellite observations
S. Ren, E.S. Miles, L. Jia, M. Menenti, M. Kneib, P. Buri, M.J. McCarthy, T.E. Shaw, W. Yang, F. Pellicciotti, Remote Sensing 13 (2021).

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2021 | Journal Article | IST-REx-ID: 12587 |

Using climate reanalysis data in conjunction with multi-temporal satellite thermal imagery to derive supraglacial debris thickness changes from energy-balance modelling
R.L. Stewart, M. Westoby, F. Pellicciotti, A. Rowan, D. Swift, B. Brock, J. Woodward, Journal of Glaciology 67 (2021) 366–384.

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2021 | Technical Report | IST-REx-ID: 6995 |

Identification of neural oscillations and epileptiform changes in human brain organoids
R.A. Samarasinghe, O. Miranda, J.E. Buth, S. Mitchell, I. Ferando, M. Watanabe, A. Kurdian, P. Golshani, K. Plath, W.E. Lowry, J.M. Parent, I. Mody, B.G. Novitch, Identification of Neural Oscillations and Epileptiform Changes in Human Brain Organoids, Springer Nature, 2021.

2021 | Journal Article | IST-REx-ID: 9101 |

Early life differences in behavioral predispositions in two Alligatoridae species
S.A. Reber, J. Oh, J. Janisch, C. Stevenson, S. Foggett, A. Wilkinson, Animal Cognition 24 (2021) 753–764.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9380 |

High rates of genome rearrangements and pathogenicity of Shigella spp
Z. Seferbekova, A. Zabelkin, Y. Yakovleva, R. Afasizhev, N.O. Dranenko, N. Alexeev, M.S. Gelfand, O. Bochkareva, Frontiers in Microbiology 12 (2021).

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9558 |

Coarse graining the state space of a turbulent flow using periodic orbits
G. Yalniz, B. Hof, N.B. Budanur, Physical Review Letters 126 (2021).

2021 | Journal Article | IST-REx-ID: 9778 |

Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses
D.H. Vandael, Y. Okamoto, P.M. Jonas, Nature Communications 12 (2021).

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 10033 |

The Atiyah-Bott formula and connectivity in chiral Koszul duality
Q.P. Ho, Advances in Mathematics 392 (2021).

[Published Version] View | Files available | DOI | WoS | arXiv

2021 | Journal Article | IST-REx-ID: 10203 |

Bright single photon emitters with enhanced quantum efficiency in a two-dimensional semiconductor coupled with dielectric nano-antennas
L. Sortino, P.G. Zotev, C.L. Phillips, A.J. Brash, J. Cambiasso, E. Marensi, A.M. Fox, S.A. Maier, R. Sapienza, A.I. Tartakovskii, Nature Communications 12 (2021).

[Published Version] View | Files available | DOI | WoS | arXiv

2021 | Journal Article | IST-REx-ID: 10402 |

Theory of branching morphogenesis by local interactions and global guidance
M.C. Ucar, D. Kamenev, K. Sunadome, D.C. Fachet, F. Lallemend, I. Adameyko, S. Hadjab, E.B. Hannezo, Nature Communications 12 (2021).

2021 | Conference Paper | IST-REx-ID: 10408 |

Grafting key trees: Efficient key management for overlapping groups
J.F. Alwen, B. Auerbach, M.A. Baig, M. Cueto Noval, K. Klein, G. Pascual Perez, K.Z. Pietrzak, M. Walter, in:, 19th International Conference, Springer Nature, 2021, pp. 222–253.

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2021 | Journal Article | IST-REx-ID: 10573 |

Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis
A. Munjal, E.B. Hannezo, T.Y.C. Tsai, T.J. Mitchison, S.G. Megason, Cell 184 (2021) 6313–6325.e18.

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2021 | Conference Paper | IST-REx-ID: 10666 |

Adversarial training is not ready for robot learning
M. Lechner, R. Hasani, R. Grosu, D. Rus, T.A. Henzinger, in:, 2021 IEEE International Conference on Robotics and Automation, 2021, pp. 4140–4147.

2021 | Journal Article | IST-REx-ID: 7901 |

Correlation energy of a weakly interacting Fermi gas
N.P. Benedikter, P.T. Nam, M. Porta, B. Schlein, R. Seiringer, Inventiones Mathematicae 225 (2021) 885–979.

[Published Version] View | Files available | DOI | WoS | arXiv

2021 | Journal Article | IST-REx-ID: 9121 |

The BCS energy gap at low density
A.B. Lauritsen, Letters in Mathematical Physics 111 (2021).

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 9225 |

Persistence of the spectral gap for the Landau–Pekar equations
D. Feliciangeli, S.A.E. Rademacher, R. Seiringer, Letters in Mathematical Physics 111 (2021).

[Published Version] View | Files available | DOI | WoS

2021 | Thesis | IST-REx-ID: 10030 |

Discrete-to-continuum limits of transport problems and gradient flows in the space of measures
L. Portinale, Discrete-to-Continuum Limits of Transport Problems and Gradient Flows in the Space of Measures, Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Journal Article | IST-REx-ID: 9393 |

Faster algorithms for quantitative verification in bounded treewidth graphs
K. Chatterjee, R. Ibsen-Jensen, A. Pavlogiannis, Formal Methods in System Design 57 (2021) 401–428.

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2021 | Conference Paper | IST-REx-ID: 9678 |

Efficient load-balancing through distributed token dropping
S. Brandt, B. Keller, J. Rybicki, J. Suomela, J. Uitto, in:, Annual ACM Symposium on Parallelism in Algorithms and Architectures, 2021, pp. 129–139.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 8196 |

New strong convergence method for the sum of two maximal monotone operators
Y. Shehu, Q.-L. Dong, L.-L. Liu, J.-C. Yao, Optimization and Engineering 22 (2021) 2627–2653.

[Published Version] View | Files available | DOI | WoS

2021 | Journal Article | IST-REx-ID: 7939 |

Fast approximate shortest paths in the congested clique
K. Censor-Hillel, M. Dory, J. Korhonen, D. Leitersdorf, Distributed Computing 34 (2021) 463–487.

2021 | Thesis | IST-REx-ID: 9992 |

Wound healing in the Arabidopsis root meristem
L. Hörmayer, Wound Healing in the Arabidopsis Root Meristem, Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2021 | Preprint | IST-REx-ID: 10066 |

Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning
Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Kruijf M de, Carballido MJ, Svab S, Kuhlmann AV, Braakman FR, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. arXiv, 2107.12975.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2021 | Journal Article | IST-REx-ID: 9913 |

Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture
A. Vega, I. Fredes, J. O’Brien, Z. Shen, K. Ötvös, R. Abualia, E. Benková, S.P. Briggs, R.A. Gutiérrez, EMBO Reports 22 (2021).

2021 | Thesis | IST-REx-ID: 10135 |

Molecular mechanisms of the cytokinin-regulated endomembrane trafficking to coordinate plant organogenesis
H. Semerádová, Molecular Mechanisms of the Cytokinin-Regulated Endomembrane Trafficking to Coordinate Plant Organogenesis, Institute of Science and Technology Austria, 2021.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 11503 |

The MUSE Hubble Ultra Deep Field Survey: XIV. Evolution of the Lyα emitter fraction from z = 3 to z = 6
Kusakabe H, Blaizot J, Garel T, Verhamme A, Bacon R, Richard J, Hashimoto T, Inami H, Conseil S, Guiderdoni B, Drake AB, Christian Herenz E, Schaye J, Oesch P, Matthee JJ, Anna Marino R, Borello Schmidt K, Pelló R, Maseda M, Leclercq F, Kerutt J, Mahler G. 2020. The MUSE Hubble Ultra Deep Field Survey: XIV. Evolution of the Lyα emitter fraction from z = 3 to z = 6. Astronomy & Astrophysics. 638, A12.

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 11529 |

The nature of CR7 revealed with MUSE: A young starburst powering extended Ly α emission at z = 6.6
J.J. Matthee, G. Pezzulli, R. Mackenzie, S. Cantalupo, H. Kusakabe, F. Leclercq, D. Sobral, J. Richard, L. Wisotzki, S. Lilly, L. Boogaard, R. Marino, M. Maseda, T. Nanayakkara, Monthly Notices of the Royal Astronomical Society 498 (2020) 3043–3059.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 11531 |

Elevated ionizing photon production efficiency in faint high-equivalent-width Lyman-α emitters
M.V. Maseda, R. Bacon, D. Lam, J.J. Matthee, J. Brinchmann, J. Schaye, I. Labbe, K.B. Schmidt, L. Boogaard, R. Bouwens, S. Cantalupo, M. Franx, T. Hashimoto, H. Inami, H. Kusakabe, G. Mahler, T. Nanayakkara, J. Richard, L. Wisotzki, Monthly Notices of the Royal Astronomical Society 493 (2020) 5120–5130.

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 11612 |

Detection and characterization of oscillating red giants: First results from the TESS satellite
Aguirre VS, Stello D, Stokholm A, Mosumgaard JR, Ball WH, Basu S, Bossini D, Bugnet LA, Buzasi D, Campante TL, Carboneau L, Chaplin WJ, Corsaro E, Davies GR, Elsworth Y, García RA, Gaulme P, Hall OJ, Handberg R, Hon M, Kallinger T, Kang L, Lund MN, Mathur S, Mints A, Mosser B, Çelik Orhan Z, Rodrigues TS, Vrard M, Yıldız M, Zinn JC, Örtel S, Beck PG, Bell KJ, Guo Z, Jiang C, Kuszlewicz JS, Kuehn CA, Li T, Lundkvist MS, Pinsonneault M, Tayar J, Cunha MS, Hekker S, Huber D, Miglio A, F. G. Monteiro MJP, Slumstrup D, Winther ML, Angelou G, Benomar O, Bódi A, De Moura BL, Deheuvels S, Derekas A, Di Mauro MP, Dupret M-A, Jiménez A, Lebreton Y, Matthews J, Nardetto N, do Nascimento JD, Pereira F, Rodríguez Díaz LF, Serenelli AM, Spitoni E, Stonkutė E, Suárez JC, Szabó R, Van Eylen V, Ventura R, Verma K, Weiss A, Wu T, Barclay T, Christensen-Dalsgaard J, Jenkins JM, Kjeldsen H, Ricker GR, Seager S, Vanderspek R. 2020. Detection and characterization of oscillating red giants: First results from the TESS satellite. The Astrophysical Journal Letters. 889(2), L34.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 7530 |

Heat rectification via a superconducting artificial atom
J.L. Senior, A. Gubaydullin, B. Karimi, J.T. Peltonen, J. Ankerhold, J.P. Pekola, Communications Physics 3 (2020).

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7567 |

Coxeter triangulations have good quality
A. Choudhary, S. Kachanovich, M. Wintraecken, Mathematics in Computer Science 14 (2020) 141–176.

[Published Version] View | Files available | DOI

2020 | Conference Paper | IST-REx-ID: 9040 |

Formal methods with a touch of magic
P.A. Alamdari, G. Avni, T.A. Henzinger, A. Lukina, in:, Proceedings of the 20th Conference on Formal Methods in Computer-Aided Design, TU Wien Academic Press, 2020, pp. 138–147.

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 9129

How do ocean warm anomalies favor the aggregation of deep convective clouds?
S. Shamekh, C.J. Muller, J.-P. Duvel, F. D’Andrea, Journal of the Atmospheric Sciences 77 (2020) 3733–3745.

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2020 | Journal Article | IST-REx-ID: 9685 |

Evidence for supercritical behaviour of high-pressure liquid hydrogen
B. Cheng, G. Mazzola, C.J. Pickard, M. Ceriotti, Nature 585 (2020) 217–220.

2020 | Journal Article | IST-REx-ID: 12595 |

Seasonal dynamics of a temperate Tibetan glacier revealed by high-resolution UAV photogrammetry and in situ measurements
W. Yang, C. Zhao, M. Westoby, T. Yao, Y. Wang, F. Pellicciotti, J. Zhou, Z. He, E. Miles, Remote Sensing 12 (2020).

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2020 | Journal Article | IST-REx-ID: 6649 |

Optimal upper bound for the correlation energy of a Fermi gas in the mean-field regime
N.P. Benedikter, P.T. Nam, M. Porta, B. Schlein, R. Seiringer, Communications in Mathematical Physics 374 (2020) 2097–2150.

[Published Version] View | Files available | DOI | WoS | arXiv

2020 | Journal Article | IST-REx-ID: 7004 |

Cohomological Hall algebras, vertex algebras and instantons
M. Rapcak, Y. Soibelman, Y. Yang, G. Zhao, Communications in Mathematical Physics 376 (2020) 1803–1873.

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2020 | Research Data Reference | IST-REx-ID: 9885

MURL_Dataz
M.C. Ucar, R. Lipowsky, (2020).

[Published Version] View | Files available | DOI

2020 | Journal Article | IST-REx-ID: 7646 |

Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis
E. Lee, B. Vila Nova Santana, E. Samuels, F. Benitez-Fuente, E. Corsi, M. Botella, J. Perez-Sancho, S. Vanneste, J. Friml, A. Macho, A. Alves Azevedo, A. Rosado, Journal of Experimental Botany 71 (2020) 3986–3998.

2020 | Journal Article | IST-REx-ID: 7805 |

Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance
Hurny A, Cuesta C, Cavallari N, Ötvös K, Duclercq J, Dokládal L, Montesinos López JC, Gallemi M, Semerádová H, Rauter T, Stenzel I, Persiau G, Benade F, Bhalearo R, Sýkorová E, Gorzsás A, Sechet J, Mouille G, Heilmann I, De Jaeger G, Ludwig-Müller J, Benková E. 2020. Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance. Nature Communications. 11, 2170.

2020 | Journal Article | IST-REx-ID: 13460 |

Stars stripped in binaries: The living gravitational-wave sources
Y.L.L. Götberg, V. Korol, A. Lamberts, T. Kupfer, K. Breivik, B. Ludwig, M.R. Drout, The Astrophysical Journal 904 (2020).

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2020 | Journal Article | IST-REx-ID: 8261 |

Selective routing of spatial information flow from input to output in hippocampal granule cells
X. Zhang, A. Schlögl, P.M. Jonas, Neuron 107 (2020) 1212–1225.

2020 | Journal Article | IST-REx-ID: 8323 |

A farewell to Ricky Pollack
J. Pach, Discrete and Computational Geometry 64 (2020) 571–574.

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2020 | Journal Article | IST-REx-ID: 9104 |

On the support of the free additive convolution
Z. Bao, L. Erdös, K. Schnelli, Journal d’Analyse Mathematique 142 (2020) 323–348.

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2020 | Journal Article | IST-REx-ID: 10862 |

Spectral rigidity for addition of random matrices at the regular edge
Z. Bao, L. Erdös, K. Schnelli, Journal of Functional Analysis 279 (2020).

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2020 | Journal Article | IST-REx-ID: 7949 |

The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis
Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu L, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite J, Rigal A, R Harborough S, Persiau G, Vanneste S, Kirschner G, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett M, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I. 2020. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. Molecular & Cellular Proteomics. 19(8), 1248–1262.

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