ISTA Research Explorer

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Roland Gansch

Gabriele Buchner-Kranzl

Anastasiia Heurteur

503 Publications

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2025 | Published | Thesis | IST-REx-ID: 19557

Schwarz, Lena A, Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution. 2025

[Published Version] View | Files available | DOI

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19599 |

Anghileri, Lucia, Evidence for a unifying NiI/NiIII mechanism in light-mediated cross-coupling catalysis. Journal of the American Chemical Society. 2025

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2025 | In Press | Journal Article | IST-REx-ID: 19602 |

Walker, James, Extensive N4 cytosine methylation is essential for Marchantia sperm function. Cell. 2025

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2025 | Published | Thesis | IST-REx-ID: 19478

Chen H. 2025. The cAMP second messenger in auxin signalling. Institute of Science and Technology Austria.

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2025 | Published | Journal Article | IST-REx-ID: 19593 |

Hübschmann, Verena, Microglia determine an immune-challenged environment and facilitate ibuprofen action in human retinal organoids. Journal of Neuroinflammation 22 (1). 2025

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2025 | Published | Journal Article | IST-REx-ID: 18778 |

Tluckova, Katarina, Mechanism of mammalian transcriptional repression by noncoding RNA. Nature Structural & Molecular Biology 32. 2025

[Published Version] View | Files available | DOI | WoS

2025 | Published | Journal Article | IST-REx-ID: 19597 |

Valentini, Marco, Subgap transport in superconductor-semiconductor hybrid islands: Weak and strong coupling regimes. Physical Review Research 7 (2). 2025

[Published Version] View | Files available | DOI

2025 | Published | Thesis | IST-REx-ID: 19533

Sett, Riya, Quantum remote sensing and non-equilibrium phase transitions in the microwave regime. 2025

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19404 |

Tavano S, Brückner D, Tasciyan S, Tong X, Kardos R, Schauer A, Hauschild R, Heisenberg C-PJ. 2025. BMP-dependent patterning of ectoderm tissue material properties modulates lateral mesendoderm cell migration during early zebrafish gastrulation. Cell Reports. 44(3), 115387.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2025 | Published | Thesis | IST-REx-ID: 19431

Hlavata, Annamaria, Regulation of Cytoplasmic RNA Polymerase II. 2025

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2025 | Research Data | IST-REx-ID: 19409 |

Saez Mollejo J. 2025. Exchange anisotropies in microwave-driven singlet-triplet qubits, Institute of Science and Technology Austria, 10.15479/AT:ISTA:19409.

[Published Version] View | Files available | DOI

2025 | Published | Thesis | IST-REx-ID: 19386

Elkrewi, Marwan N, Evolution of sex chromosomes, sex determination and asexuality in Artemia brine shrimp. 2025

[Published Version] View | Files available | DOI

2025 | Published | Thesis | IST-REx-ID: 19395 |

Monzer, Aline, Cell-Surface Auxin Signaling: Linking molecular pathways to plant development. 2025

[Published Version] View | Files available | DOI

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19555 |

Rohden, Darja, Synthesis of selectively 13C/2H/15N- labeled arginine to probe protein conformation and interaction by NMR spectroscopy. Chemistry - A European Journal. 2025

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2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19421 |

Chen H, Qi L, Zou M, Lu M, Kwiatkowski M, Pei Y, Jaworski K, Friml J. 2025. TIR1-produced cAMP as a second messenger in transcriptional auxin signalling. Nature.

2025 | Published | Thesis | IST-REx-ID: 19271

Önal C. 2025. Asymmetrical modulation of fear expression via GABAB receptors in the mouse medial habenula. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2025 | Research Data | IST-REx-ID: 18697 |

Danzl JG, Lyudchik J, Kreuzinger C. 2025. Light-microscopy based connectomic reconstruction of mammalian brain tissue, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18697.

[Published Version] View | Files available | DOI

2025 | Draft | Preprint | IST-REx-ID: 19398 |

Monzer A, Mazur E, Rodriguez Solovey L, Gallei MC, Zou M, Smejkal M, Cervenova E, Friml J. TMK interacting network of receptor like kinases for auxin canalization and beyond. bioRxiv, 10.1101/2025.02.28.640727.

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2025 | Published | Journal Article | IST-REx-ID: 19401 |

Janik M, Roux KER, Borja Espinosa CN, Sagi O, Baghdadi A, Adletzberger T, Calcaterra S, Botifoll M, Garzón Manjón A, Arbiol J, Chrastina D, Isella G, Pop IM, Katsaros G. 2025. Strong charge-photon coupling in planar germanium enabled by granular aluminium superinductors. Nature Communications. 16, 2103.

[Published Version] View | Files available | DOI | arXiv

2025 | Published | Journal Article | IST-REx-ID: 19566 |

Schoot Uiterkamp, Florianne E, Optic nerve crush does not induce retinal ganglion cell loss in the contralateral eye. Investigative Ophthalmology & Visual Science 66 (3). 2025

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2025 | Published | Journal Article | IST-REx-ID: 19076 |

Vega Zuniga, Tomas A, A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics. Nature Neuroscience 28. 2025

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2025 | Published | Thesis | IST-REx-ID: 19302

Sartoris, Linda, The effect of circadian rhythm on organisational immunity of ant colonies. 2025

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 18853

Zeng, Guifang, Modulating the solvation structure to enhance amorphous solid electrolyte interface formation for ultra-stable aqueous zinc anode. Energy and Environmental Science 18 (4). 2025

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2025 | Published | Journal Article | IST-REx-ID: 19364

Xu S, Horta S, Lawal AQ, Maji K, Lorion M, Ibáñez M. 2025. Interfacial bonding enhances thermoelectric cooling in 3D-printed materials. Science. 387(6736), 845–850.

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2025 | Draft | Preprint | IST-REx-ID: 19399 |

Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.

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2025 | Published | Journal Article | IST-REx-ID: 19278 |

Sobarzo Ponce JCA, Pertl F, Balazs D, Costanzo T, Sauer M, Foelske A, Ostermann M, Pichler CM, Wang Y, Nagata Y, Bonn M, Waitukaitis SR. 2025. Spontaneous ordering of identical materials into a triboelectric series. Nature. 638(8051), 664–669.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2025 | Published | Thesis | IST-REx-ID: 19456

Cumpelik, Andrea D, The role of prefrontal spatial coding in supporting a contextual association task. 2025

[Published Version] View | Files available | DOI

2025 | Published | Thesis | IST-REx-ID: 19048 |

Maslov M. 2025. Emergent physics of rotating quantum impurities in many-body environments. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19280 |

Redchenko E, Zens M, Zemlicka M, Peruzzo M, Hassani F, Sett R, Zielinski PD, Dhar HS, Krimer DO, Rotter S, Fink JM. 2025. Observation of collapse and revival in a superconducting atomic frequency comb. Physical Review Letters. 134(6), 063601.

[Published Version] View | Files available | DOI | arXiv

2025 | Published | Journal Article | IST-REx-ID: 19026 |

Puglia, Denise, Room temperature, cavity-free capacitive strong coupling to mechanical motion. Nano Letters 25 (7). 2025

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2025 | Research Data | IST-REx-ID: 18991 |

Chiossi HSC. 2025. Research data for the publication ‘Learning reshapes the hippocampal representation hierarchy’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18991.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 17884 |

Obr M, Percipalle M, Chernikova D, Yang H, Thader A, Pinke G, Porley Esteves D, Mansky LM, Dick RA, Schur FK. 2025. Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice. Nature Structural & Molecular Biology. 32, 268–276.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19037 |

Hasler R, Livio PA, Bozdogan A, Fossati S, Hageneder S, Montes-García V, Movilli J, Moazzenzade T, Loohuis L, Reiner-Rozman C, Tamayo A, Fiedler C, Ibáñez M, Kleber C, Huskens J, Dostalek J, Samorì P, Knoll W. 2025. Dual electronic and optical monitoring of biointerfaces by a grating-structured coplanar-gated field-effect transistor. IEEE Sensors Journal.

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2025 | Research Data | IST-REx-ID: 18886 |

Janik M. 2025. Research data for publication ‘Strong charge-photon coupling in planar germanium enabled by granular aluminium superinductors’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18886.

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2025 | Published | Thesis | IST-REx-ID: 18871

Arnold GM. 2025. Microwave-optic interconnects for superconducting circuits. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 18879 |

Watson, Jake, Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. Cell 188 (2). 2025

[Published Version] View | Files available | DOI | WoS

2025 | Research Data | IST-REx-ID: 18712 |

Surendranadh P, Sachdeva H. 2025. Mathematica notebook and Fortran code for ‘Effect of assortative mating and sexual selection on polygenic barriers to gene flow’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:17344.

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2025 | Published | Book Chapter | IST-REx-ID: 18765

Cheung GT, Pauler F, Hippenmeyer S. 2025.Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM). In: Lineage Tracing. Methods in Molecular Biology, vol. 2886, 139–151.

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2024 | Published | Thesis | IST-REx-ID: 18766 |

Datler J. 2024. Elucidating the structural determinants of the poxvirus core using multi-modal cryo-EM. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 19518 |

Wu, Diyuan, The iterative optimal brain surgeon: Faster sparse recovery by leveraging second-order information. 38th Conference on Neural Information Processing Systems 37. 2024

[Preprint] View | Download Preprint (ext.) | arXiv

2024 | Published | Conference Paper | IST-REx-ID: 19510 |

Modoranu, Ionut-Vlad, MICROADAM: Accurate adaptive optimization with low space overhead and provable convergence. 38th Conference on Neural Information Processing Systems 37. 2024

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2024 | Published | Thesis | IST-REx-ID: 18681

Tavakoli M. 2024. Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 18601 |

Rus S, Merrin J, Kulig MA, Minchington T, Kicheva A. 2024. Protocol for fabricating elastomeric stencils for patterned stem cell differentiation. STAR Protocols. 5(4), 103187.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 18553 |

Ramadhin AR, Lee S-H, Zhou D, Testa Salmazo AP, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA. 2024. STK19 drives transcription-coupled repair by stimulating repair complex stability, RNA Pol II ubiquitylation, and TFIIH recruitment. Molecular Cell. 84(24), 4740–4757.e12.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 18674 |

Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18660 |

Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Research Data | IST-REx-ID: 18579 |

Vega Zuniga TA, Sumser AL, Symonova O, Koppensteiner P, Schmidt F, Jösch MA. 2024. A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18579.

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2024 | Published | Journal Article | IST-REx-ID: 18596 |

Králová M, Kubalová I, Hajný J, Kubiasova K, Vagaská K, Ge Z, Gallei MC, Semerádová H, Kuchařová A, Hönig M, Monzer A, Kovačik M, Friml J, Novák O, Benková E, Ikeda Y, Zalabák D. 2024. A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis. Molecular Plant. 17(12), 1850–1865.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 18653 |

Hickie J, Van Straaten B, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Katsaros G, Ares N. 2024. Automated long-range compensation of an rf quantum dot sensor. Physical Review Applied. 22(6), 064026.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 18891 |

Súkeník, Peter, Neural collapse versus low-rank bias: Is deep neural collapse really optimal?. 38th Annual Conference on Neural Information Processing Systems 37. 2024

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2024 | Published | Journal Article | IST-REx-ID: 18761 |

Fraser R, Moraa R, Djolai A, Meisenheimer N, Laube S, Vicoso B, Huylmans AK. 2024. Evidence for a novel X chromosome in termites. Genome Biology and Evolution. 16(12), evae265.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 18588 |

Mweka CN. 2024. Non equilibrium dynamics of driven individual particles and 3D printing across scales. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | In Press | Journal Article | IST-REx-ID: 15016 |

Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell.

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2024 | Epub ahead of print | Journal Article | IST-REx-ID: 18605 |

Agasthya LN, Muller CJ, Cheve M. 2024. Moist convective scaling: Insights from an idealised model. Quarterly Journal of the Royal Meteorological Society.

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2024 | Submitted | Preprint | IST-REx-ID: 19424 |

Saez Mollejo J, Jirovec D, Schell YA, Kukucka J, Calcaterra S, Chrastina D, Isella G, Rimbach-Russ M, Bosco S, Katsaros G. Exchange anisotropies in microwave-driven singlet-triplet qubits. arXiv, 2408.03224.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2024 | Published | Thesis | IST-REx-ID: 18574

Gupta D. 2024. Visual adaptations to natural statistics. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18568 |

Satapathy RK. 2024. Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 18603 |

Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. 2024. Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology. 22(11), e3002879.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 18531

Mrnjavac A. 2024. Early stages of sex chromosome evolution. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18515 |

Surendranadh P. 2024. Effect of population structure on neutral genetic variation and barriers to gene exchange. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18477

Kaczmarek BM. 2024. Biochemical and structural insights into ADAR1 RNA editing. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18471

Agudelo Duenas N. 2024. Visualizing the neuronal transcriptional landscape with tissue context. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 18444 |

Pokusaeva V, Satapathy RK, Symonova O, Jösch MA. 2024. Bilateral interactions of optic-flow sensitive neurons coordinate course control in flies. Nature Communications. 15, 8830.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Submitted | Preprint | IST-REx-ID: 19520 |

Vijatovic, David, Spinal neuron diversity scales exponentially with swim-to-limb transformation during frog metamorphosis. bioRxiv. 2024

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2024 | Published | Thesis | IST-REx-ID: 18101 |

Porley Esteves D. 2024. Structural characterization of spumavirus capsid assemblies. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18129

Janik M. 2024. Strong charge-photon coupling in Germanium enabled by granular aluminium superinductors. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17232 |

Cheung GT, Pauler F, Koppensteiner P, Hippenmeyer S. 2024. Protocol for mapping cell lineage and cell-type identity of clonally-related cells in situ using MADM-CloneSeq. STAR Protocols. 5(3), 103168.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 17187 |

Cheung GT, Streicher C, Hippenmeyer S. 2024. Protocol for quantitative reconstruction of cell lineage using mosaic analysis with double markers in mice. STAR Protocols. 5(3), 103157.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 18104

Puglia D. 2024. Everyday electromechanics: Capacitive strong coupling to mechanical motion. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 18076 |

Sagi O. 2024. Hybrid circuits on planar Germanium. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17881 |

Mukhopadhyay S. 2024. Thermal effects in one dimensional Josephson chains. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17850 |

Gonzalez Somermeyer L. 2024. Fitness landscapes of orthologous green fluorescent proteins. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17485 |

Frantar E. 2024. Compressing large neural networks : Algorithms, systems and scaling laws. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17490 |

Markov I. 2024. Communication-efficient distributed training of deep neural networks: An algorithms and systems perspective. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 18121 |

Moakhar AS, Iofinova EB, Frantar E, Alistarh D-A. 2024. SPADE: Sparsity-guided debugging for deep neural networks. Proceedings of the 41st International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 235, 45955–45987.

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2024 | Published | Journal Article | IST-REx-ID: 17457 |

Ritzau-Jost A, Gsell F, Sell J, Sachs S, Montanaro-Punzengruber J-C, Kirmann T, Maaß S, Irani SR, Werner C, Geis C, Sauer M, Shigemoto R, Hallermann S. 2024. LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening. Neurology, Neuroimmunology and Neuroinflammation. 11(5), e200284.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Research Data | IST-REx-ID: 17488 |

Satapathy RK, Jösch MA, Symonova O, Pokusaeva V. 2024. Bilateral interactions of optic-flow sensitive neurons coordinate course control in flies, Institute of Science and Technology Austria, 10.15479/AT:ISTA:17488.

View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17890 |

Elkrewi MN, Vicoso B. 2024. Single-nucleus atlas of the Artemia female reproductive system suggests germline repression of the Z chromosome. PLoS Genetics. 20(8), e1011376.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 17465 |

Shevchenko A. 2024. High-dimensional limits in artificial neural networks. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17885 |

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau V-V, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. 2024. The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation. Nature Communications. 15, 7511.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Submitted | Preprint | IST-REx-ID: 17468 |

Mondal, Soumyadip, Individual Marcus-type kinetics controls singlet and triplet oxygen evolution from superoxide. ChemRxiv. 2024

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2024 | Published | Book Chapter | IST-REx-ID: 18052

Kleindienst D, Costanzo T, Shigemoto R. 2024.Automated Imaging and Analysis of Synapses in Freeze-Fracture Replica Samples with Deep Learning. In: New Aspects in Analyzing the Synaptic Organization of the Brain. Neuromethods, , 123–137.

View | DOI

2024 | Draft | Preprint | IST-REx-ID: 18057 |

Mukhopadhyay S, Lancheros Naranjo DA, Senior JL, Higginbotham AP. Dual relaxation oscillations in a Josephson junction array. arXiv, 2408.07829.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2024 | Published | Book Chapter | IST-REx-ID: 17425

Miranda, Osvaldo, Morphological Analysis of Neurons and Glia Using Mosaic Analysis with Double Markers. Neuronal Morphogenesis 2831. 2024

View | DOI | PubMed | Europe PMC

2024 | Published | Preprint | IST-REx-ID: 18648 |

Machnik NN, Mahmoudi SM, Borczyk M, Krätschmer I, Bauer MJ, Robinson MR. 2024. Causal inference for multiple risk factors and diseases from genomics data. bioRxiv, 10.1101/2023.12.06.570392.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2024 | Research Data | IST-REx-ID: 17362 |

Elkrewi MN, Vicoso B. 2024. Data for: ‘Single-nucleus atlas of the Artemia female reproductive system suggests germline repression of the Z chromosome’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:17362.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 18975 |

Modoranu I-V, Kalinov A, Kurtic E, Frantar E, Alistarh D-A. 2024. Error feedback can accurately compress preconditioners. 41st International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 235, 35910–35933.

[Preprint] View | Download Preprint (ext.) | arXiv

2024 | Published | Journal Article | IST-REx-ID: 17202 |

Sagi O, Crippa A, Valentini M, Janik M, Baghumyan L, Fabris G, Kapoor L, Hassani F, Fink JM, Calcaterra S, Chrastina D, Isella G, Katsaros G. 2024. A gate tunable transmon qubit in planar Ge. Nature Communications. 15, 6400.

2024 | Published | Journal Article | IST-REx-ID: 17373 |

Lenton IC, Pertl F, Shafeek LB, Waitukaitis SR. 2024. Beyond the blur: Using experimentally determined point spread functions to improve scanning Kelvin probe imaging. Journal of Applied Physics. 136(4), 045305.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17389 |

Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, de Kruijf M, Carballido MJ, Svab S, Kuhlmann AV, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. 2024. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. Scientific Reports. 14, 17281.

2024 | Published | Thesis | IST-REx-ID: 17319 |

Lukic K. 2024. Membrane proteins in plant physiology and bioenergetics: Investigating auxin efflux transporter PIN8 and ATP synthase inhibition by the novel inhibitor Yaku’amide B. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17208 |

Medina Ramos RA. 2024. Exploring the optimization landscape of variational quantum algorithms. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Draft | Preprint | IST-REx-ID: 18677 |

Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv, 10.1101/2024.03.01.582884.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2024 | Published | Thesis | IST-REx-ID: 17206 |

Raices J. 2024. Novel approaches to studying alternative splicing in Drosophila Melanogaster: Insights into sex-specific gene expression and the evolution of sex determination. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Research Data | IST-REx-ID: 17196 |

Sagi O. 2024. A gate-tunable transmon in planar Ge, Institute of Science and Technology Austria, 10.15479/AT:ISTA:17196.

[Published Version] View | Files available | DOI

2024 | Draft | Preprint | IST-REx-ID: 18144 |

Janik M, Roux KER, Borja Espinosa CN, Sagi O, Baghdadi A, Adletzberger T, Calcaterra S, Botifoll M, Manjón AG, Arbiol J, Chrastina D, Isella G, Pop IM, Katsaros G. Strong charge-photon coupling in planar germanium enabled by granular aluminium superinductors. arXiv, 2407.03079.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2024 | Research Data | IST-REx-ID: 17344 |

Surendranadh P, Sachdeva H. 2024. Mathematica notebook for ‘Effect of assortative mating and sexual selection on polygenic barriers to gene flow’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:17344.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 15313 |

Agasthya LN, Muller CJ. 2024. Dynamics and scaling of internally cooled convection. Communications in Nonlinear Science and Numerical Simulation. 134, 108011.

[Published Version] View | Files available | DOI | arXiv

2024 | Published | Journal Article | IST-REx-ID: 17235 |

Kohopää K, Ronzani A, Jabdaraghi RN, Bera A, Ribeiro M, Hazra D, Senior JL, Prunnila M, Govenius J, Lehtinen JS, Kemppinen A. 2024. Effect of ion irradiation on superconducting thin films. APL Materials. 12(7), 071101.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 14979 |

Datler J, Hansen J, Thader A, Schlögl A, Bauer LW, Hodirnau V-V, Schur FK. 2024. Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores. Nature Structural & Molecular Biology. 31, 1114–1123.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15323 |

Vercellino I, Sazanov LA. 2024. SCAF1 drives the compositional diversity of mammalian respirasomes. Nature Structural and Molecular Biology. 31, 1061–1071.

[Submitted Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14257 |

Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Amberg N, Venturino A, Roessler K, Czech T, Höftberger R, Siegert S, Novarino G, Jonas PM, Danzl JG. 2024. Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology. 42, 1051–1064.

2024 | Published | Journal Article | IST-REx-ID: 15381 |

Rangel Guerrero DK, Balueva K, Barayeu U, Baracskay P, Gridchyn I, Nardin M, Roth CN, Wulff P, Csicsvari JL. 2024. Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. Neuron. 112(12), 2045–2061.e10.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 17052 |

Fiedler C, Calcabrini M, Liu Y, Ibáñez M. 2024. Unveiling crucial chemical processing parameters influencing the performance of solution-processed inorganic thermoelectric materials. Angewandte Chemie - International Edition. 63(25), e202402628.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15357 |

Liu Y, Lee S, Fiedler C, Spadaro MC, Chang C, Li M, Hong M, Arbiol J, Ibáñez M. 2024. Enhancing thermoelectric performance of solutionpProcessed polycrystalline SnSe with PbSe nanocrystals. Chemical Engineering Journal. 490, 151405.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 15182 |

Kleinhanns T, Milillo F, Calcabrini M, Fiedler C, Horta S, Balazs D, Strumolo MJ, Hasler R, Llorca J, Tkadletz M, Brutchey RL, Ibáñez M. 2024. A route to high thermoelectric performance: Solution‐based control of microstructure and composition in Ag2Se. Advanced Energy Materials. 14(22), 2400408.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 17133 |

Hassani F. 2024. Superconducting qubits capable of dynamic switching between protected and high-speed control regimes. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 15301 |

Hörmayer L, Montesinos López JC, Trozzi N, Spona L, Yoshida S, Marhavá P, Caballero Mancebo S, Benková E, Heisenberg C-PJ, Dagdas Y, Majda M, Friml J. 2024. Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization. Developmental Cell. 59(10), 1333–1344.e4.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Research Data | IST-REx-ID: 15385 |

Burnett L, Koppensteiner P, Symonova O, Masson T, Vega Zuniga TA, Contreras X, Rülicke T, Shigemoto R, Novarino G, Jösch MA. 2024. Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice, Institute of Science and Technology Austria, 10.15479/AT:ISTA:15385.

[Published Version] View | Files available | DOI

2024 | Published | Thesis | IST-REx-ID: 15352

Murmann JS. 2024. Investigating acute microglia response to seizure activity in vivo: Combining 2-Photon imaging and EEG recording. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Draft | Preprint | IST-REx-ID: 18688 |

Watson JF, Vargas-Barroso V, Morse-Mora RJ, Navas-Olive A, Tavakoli M, Danzl JG, Tomschik M, Rössler K, Jonas PM. Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. bioRxiv, 10.1101/2024.05.02.592169.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2024 | Published | Journal Article | IST-REx-ID: 15375 |

He S, Yu Y, Wang L, Zhang J, Bai Z, Li G, Li P, Feng X. 2024. Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis. The Plant Cell. 36(5), 1829–1843.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 17124 |

Fiedler C, Liu Y, Ibáñez M. 2024. Solution-processed, surface-engineered, polycrystalline CdSe-SnSe exhibiting low thermal conductivity. Journal of Visualized Experiments. 2024(207), e66278.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15401 |

Napoli F, Guan J-Y, Arnaud C-A, Macek P, Fraga H, Breyton C, Schanda P. 2024. Deuteration of proteins boosted by cell lysates: High-resolution amide and Ha magic-angle-spinning (MAS) NMR without the reprotonation bottleneck. Magnetic Resonance. 5(1), 33–49.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 17147

Depope A, Mondelli M, Robinson MR. 2024. Inference of genetic effects via approximate message passing. 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing. ICASSP: International Conference on Acoustics, Speech and Signal Processing, 13151–13155.

View | DOI

2024 | Published | Journal Article | IST-REx-ID: 15330 |

Gnyliukh N, Johnson AJ, Nagel M, Monzer A, Babic D, Hlavata A, Alotaibi S, Isono E, Loose M, Friml J. 2024. Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in Arabidopsis thaliana. Journal of Cell Science. 137(8), jcs. 261720.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15250 |

Boytsov D, Madej GM, Horn G, Blaha N, Köcher T, Sitte HH, Siekhaus DE, Ziegler C, Sandtner W, Roblek M. 2024. Orphan lysosomal solute carrier MFSD1 facilitates highly selective dipeptide transport. Proceedings of the National Academy of Sciences of the United States of America. 121(13), e2319686121.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15146 |

Zens B, Fäßler F, Hansen J, Hauschild R, Datler J, Hodirnau V-V, Zheden V, Alanko JH, Sixt MK, Schur FK. 2024. Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix. Journal of Cell Biology. 223(6), e202309125.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14794 |

Hansen AH, Hippenmeyer S. 2024. Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers. STAR Protocols. 5(1), 102795.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14683 |

Amberg N, Cheung GT, Hippenmeyer S. 2024. Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry. STAR Protocols. 5(1), 102771.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 15101 |

Chen J. 2024. Developmental transformation of nanodomain coupling between Ca2+ channels and release sensors at a central GABAergic synapse. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Conference Paper | IST-REx-ID: 17411 |

Scott JA, Zakerinia H, Lampert C. 2024. PEFLL: Personalized federated learning by learning to learn. 12th International Conference on Learning Representations. ICLR: International Conference on Learning Representations.

[Published Version] View | Files available | arXiv

2024 | Published | Journal Article | IST-REx-ID: 14843 |

Chen J, Kaufmann W, Chen C, Arai itaru, Kim O, Shigemoto R, Jonas PM. 2024. Developmental transformation of Ca2+ channel-vesicle nanotopography at a central GABAergic synapse. Neuron. 112(5), 755–771.e9.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15257 |

Kulich I, Schmid J, Teplova A, Qi L, Friml J. 2024. Rapid translocation of NGR proteins driving polarization of PIN-activating D6 protein kinase during root gravitropism. eLife. 12, 91523.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15118

Nußbaum P, Kureisaite-Ciziene D, Bellini D, Van Der Does C, Kojic M, Taib N, Yeates A, Tourte M, Gribaldo S, Loose M, Löwe J, Albers SV. 2024. Proteins containing photosynthetic reaction centre domains modulate FtsZ-based archaeal cell division. Nature Microbiology. 9(3), 698–711.

View | DOI | PubMed | Europe PMC

2024 | Published | Preprint | IST-REx-ID: 19063 |

Zverev E, Abdelnabi S, Tabesh S, Fritz M, Lampert C. 2024. Can LLMs separate instructions from data? And what do we even mean by that? arXiv, 2403.06833.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2024 | Published | Thesis | IST-REx-ID: 15020 |

Hledik M. 2024. Genetic information and biological optimization. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Draft | Preprint | IST-REx-ID: 18689 |

Gallei MC, Truckenbrodt SM, Kreuzinger C, Inumella S, Vistunou V, Sommer CM, Tavakoli M, Agudelo Duenas N, Vorlaufer J, Jahr W, Randuch M, Johnson AJ, Benková E, Friml J, Danzl JG. Super-resolution expansion microscopy in plant roots. bioRxiv, 10.1101/2024.02.21.581330.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2024 | Published | Journal Article | IST-REx-ID: 15084 |

Koppensteiner, Peter, GABAB receptors induce phasic release from medial habenula terminals through activity-dependent recruitment of release-ready vesicles. Proceedings of the National Academy of Sciences of the United States of America 121 (8). 2024

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 17183 |

Sett, Riya, Emergent macroscopic bistability induced by a single superconducting qubit. PRX Quantum 5 (1). 2024

[Published Version] View | Files available | DOI | arXiv

2024 | Published | Journal Article | IST-REx-ID: 14846 |

Caballero Mancebo S, Shinde R, Bolger-Munro M, Peruzzo M, Szep G, Steccari I, Labrousse Arias D, Zheden V, Merrin J, Callan-Jones A, Voituriez R, Heisenberg C-PJ. 2024. Friction forces determine cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization. Nature Physics. 20, 310–321.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 15048 |

Schauer A, Pranjic-Ferscha K, Hauschild R, Heisenberg C-PJ. 2024. Robust axis elongation by Nodal-dependent restriction of BMP signaling. Development. 151(4), 1–18.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Thesis | IST-REx-ID: 14711 |

Olusanya OO. 2024. Local adaptation, genetic load and extinction in metapopulations. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 12875 |

Cheung GT, Pauler F, Koppensteiner P, Krausgruber T, Streicher C, Schrammel M, Özgen NY, Ivec A, Bock C, Shigemoto R, Hippenmeyer S. 2024. Multipotent progenitors instruct ontogeny of the superior colliculus. Neuron. 112(2), 230–246.e11.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14795 |

Arslan FN, Hannezo EB, Merrin J, Loose M, Heisenberg C-PJ. 2024. Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts. Current Biology. 34(1), 171–182.e8.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14435

Zeng G, Sun Q, Horta S, Wang S, Lu X, Zhang C, Li J, Li J, Ci L, Tian Y, Ibáñez M, Cabot A. 2024. A layered Bi2Te3@PPy cathode for aqueous zinc ion batteries: Mechanism and application in printed flexible batteries. Advanced Materials. 36(1), 2305128.

View | DOI | WoS | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 14793 |

Valentini M, Sagi O, Baghumyan L, de Gijsel T, Jung J, Calcaterra S, Ballabio A, Aguilera Servin JL, Aggarwal K, Janik M, Adletzberger T, Seoane Souto R, Leijnse M, Danon J, Schrade C, Bakkers E, Chrastina D, Isella G, Katsaros G. 2024. Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium. Nature Communications. 15, 169.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2023 | Published | Thesis | IST-REx-ID: 14697 |

Stopp JA. 2023. Neutrophils on the hunt : Migratory strategies employed by neutrophils to fulfill their effector function. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 14651 |

Arathoon, Louise S, Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus. 2023

[Published Version] View | Files available | DOI

2023 | Draft | Preprint | IST-REx-ID: 14644 |

Tluckova K, Testa Salmazo AP, Bernecky C. Mechanism of mammalian transcriptional repression by noncoding RNA. 10.15479/AT:ISTA:14644.

[Submitted Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 14719

Mollania H, Zhang C, Du R, Qi X, Li J, Horta S, Ibáñez M, Keller C, Chenevier P, Oloomi-Buygi M, Cabot A. 2023. Nanostructured Li₂S cathodes for silicon-sulfur batteries. ACS Applied Materials and Interfaces. 15(50), 58462–58475.

View | DOI | PubMed | Europe PMC

2023 | Published | Journal Article | IST-REx-ID: 13314 |

Dunajova Z, Prats Mateu B, Radler P, Lim K, Brandis D, Velicky P, Danzl JG, Wong RW, Elgeti J, Hannezo EB, Loose M. 2023. Chiral and nematic phases of flexible active filaments. Nature Physics. 19, 1916–1926.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2023 | Published | Journal Article | IST-REx-ID: 14613 |

Lasne C, Elkrewi MN, Toups MA, Layana Franco LA, Macon A, Vicoso B. 2023. The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome. Molecular Biology and Evolution. 40(12), msad245.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2023 | Published | Thesis | IST-REx-ID: 14641 |

Hennessey-Wesen M. 2023. Adaptive mutation in E. coli modulated by luxS. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 14562 |

Schur FK. 2023. Research data of the publication ‘ArpC5 isoforms regulate Arp2/3 complex-dependent protrusion through differential Ena/VASP positioning’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:14562.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 14434

He R, Yang L, Zhang Y, Jiang D, Lee S, Horta S, Liang Z, Lu X, Ostovari Moghaddam A, Li J, Ibáñez M, Xu Y, Zhou Y, Cabot A. 2023. A 3d‐4d‐5d high entropy alloy as a bifunctional oxygen catalyst for robust aqueous zinc–air batteries. Advanced Materials. 35(46), 2303719.

View | DOI | WoS | PubMed | Europe PMC

2023 | Published | Thesis | IST-REx-ID: 14547 |

Phan, Duc T, Resonant microwave spectroscopy of Al-InAs. 2023

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 14530 |

Riedl, Michael, Synchronization in collectively moving active matter. 2023

[Updated Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 14510 |

Gnyliukh N. 2023. Mechanism of clathrin-coated vesicle formation during endocytosis in plants. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 14032 |

Mukhopadhyay S, Senior JL, Saez Mollejo J, Puglia D, Zemlicka M, Fink JM, Higginbotham AP. 2023. Superconductivity from a melted insulator in Josephson junction arrays. Nature Physics. 19, 1630–1635.

[Published Version] View | Files available | DOI | WoS

2023 | Published | Journal Article | IST-REx-ID: 14363 |

Maes ME, Colombo G, Schoot Uiterkamp FE, Sternberg F, Venturino A, Pohl EE, Siegert S. 2023. Mitochondrial network adaptations of microglia reveal sex-specific stress response after injury and UCP2 knockout. iScience. 26(10), 107780.

2023 | Published | Journal Article | IST-REx-ID: 14517 |

Zemlicka M, Redchenko E, Peruzzo M, Hassani F, Trioni A, Barzanjeh S, Fink JM. 2023. Compact vacuum-gap transmon qubits: Selective and sensitive probes for superconductor surface losses. Physical Review Applied. 20(4), 044054.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2023 | Draft | Preprint | IST-REx-ID: 14591 |

Gnyliukh N, Johnson AJ, Nagel M-K, Monzer A, Hlavata A, Isono E, Loose M, Friml J. Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants. bioRxiv, 10.1101/2023.10.09.561523.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2023 | Published | Thesis | IST-REx-ID: 14280 |

Radler P. 2023. Spatiotemporal signaling during assembly of the bacterial divisome. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 13188 |

Hafner C, Bickel B. 2023. The design space of Kirchhoff rods. ACM Transactions on Graphics. 42(5), 171.

[Submitted Version] View | Files available | DOI | WoS

2023 | Published | Journal Article | IST-REx-ID: 14361 |

Riedl M, Mayer ID, Merrin J, Sixt MK, Hof B. 2023. Synchronization in collectively moving inanimate and living active matter. Nature Communications. 14, 5633.

2023 | Published | Thesis | IST-REx-ID: 14323 |

Kuzmicz-Kowalska K. 2023. Regulation of neural progenitor survival by Shh and BMP in the developing spinal cord. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 14341 |

Scarselli D, Lopez Alonso JM, Varshney A, Hof B. 2023. Turbulence suppression by cardiac-cycle-inspired driving of pipe flow. Nature. 621(7977), 71–74.

[Submitted Version] View | Files available | DOI | PubMed | Europe PMC

2023 | Published | Journal Article | IST-REx-ID: 14255 |

Koch J, Xin Q, Obr M, Schäfer A, Rolfs N, Anagho HA, Kudulyte A, Woltereck L, Kummer S, Campos J, Uckeley ZM, Bell-Sakyi L, Kräusslich HG, Schur FK, Acuna C, Lozach PY. 2023. The phenuivirus Toscana virus makes an atypical use of vacuolar acidity to enter host cells. PLoS Pathogens. 19(8), e1011562.

2023 | Published | Thesis | IST-REx-ID: 13984 |

Franschitz A. 2023. Individual and social immunity against viral infections in ants. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12696 |

Metzler S, Kirchner J, Grasse AV, Cremer S. 2023. Trade-offs between immunity and competitive ability in fighting ant males. BMC Ecology and Evolution. 23, 37.

2023 | Published | Journal Article | IST-REx-ID: 14040 |

Zhao Z, Vercellino I, Knoppová J, Sobotka R, Murray JW, Nixon PJ, Sazanov LA, Komenda J. 2023. The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis. Nature Communications. 14, 4681.

2023 | Research Data | IST-REx-ID: 13126 |

Danzl JG. 2023. Research data for the publication ‘Imaging brain tissue architecture across millimeter to nanometer scales’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:13126.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 14240 |

Jeschke S, Wojtan C. 2023. Generalizing shallow water simulations with dispersive surface waves. ACM Transactions on Graphics. 42(4), 83.

[Published Version] View | Files available | DOI | WoS

2023 | Published | Conference Abstract | IST-REx-ID: 14748

Chen Y-L, Ly M, Wojtan C. 2023. Unified treatment of contact, friction and shock-propagation in rigid body animation. Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Computer Animation. SCA: Symposium on Computer Animation, 5.

View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 13267 |

Velicky P, Miguel Villalba E, Michalska JM, Lyudchik J, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. 2023. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 20, 1256–1265.

2023 | Published | Journal Article | IST-REx-ID: 14077 |

Puixeu Sala G, Macon A, Vicoso B. 2023. Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster. G3: Genes, Genomes, Genetics. 13(8).

2023 | Published | Journal Article | IST-REx-ID: 14082

Higashi T, Stephenson RE, Schwayer C, Huljev K, Higashi AY, Heisenberg C-PJ, Chiba H, Miller AL. 2023. ZnUMBA - a live imaging method to detect local barrier breaches. Journal of Cell Science. 136(15), jcs260668.

View | DOI | WoS | PubMed | Europe PMC

2023 | Published | Conference Paper | IST-REx-ID: 14458 |

Frantar E, Alistarh D-A. 2023. SparseGPT: Massive language models can be accurately pruned in one-shot. Proceedings of the 40th International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 202, 10323–10337.

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2023 | Published | Conference Paper | IST-REx-ID: 14461 |

Markov I, Vladu A, Guo Q, Alistarh D-A. 2023. Quantized distributed training of large models with convergence guarantees. Proceedings of the 40th International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 202, 24020–24044.

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2023 | Published | Journal Article | IST-REx-ID: 13049 |

Freire M, Bhargava M, Schreck C, Hugron P-A, Bickel B, Lefebvre S. 2023. PCBend: Light up your 3D shapes with foldable circuit boards. Transactions on Graphics. 42(4), 142.

[Submitted Version] View | Files available | DOI | WoS

2023 | Published | Journal Article | IST-REx-ID: 12984 |

Piovarci M, Chapiro A, Bickel B. 2023. Skin-Screen: A computational fabrication framework for color tattoos. ACM Transactions on Graphics. 42(4), 67.

[Published Version] View | Files available | DOI | WoS

2023 | Research Data | IST-REx-ID: 13116 |

Dunajova Z, Prats Mateu B, Radler P, Lim K, Brandis D, Velicky P, Danzl JG, Wong RW, Elgeti J, Hannezo EB, Loose M. 2023. Chiral and nematic phases of flexible active filaments, Institute of Science and Technology Austria, 10.15479/AT:ISTA:13116.

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 13286 |

Valentini, Marco, Mesoscopic phenomena in hybrid semiconductor-superconductor nanodevices : From full-shell nanowires to two-dimensional hole gas in germanium. 2023

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 13968 |

Hasler R, Steger-Polt MH, Reiner-Rozman C, Fossati S, Lee S, Aspermair P, Kleber C, Ibáñez M, Dostalek J, Knoll W. 2023. Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing. Frontiers in Physics. 11, 1202132.

[Published Version] View | Files available | DOI | WoS

2023 | Published | Journal Article | IST-REx-ID: 13227 |

Hassani F, Peruzzo M, Kapoor L, Trioni A, Zemlicka M, Fink JM. 2023. Inductively shunted transmons exhibit noise insensitive plasmon states and a fluxon decay exceeding 3 hours. Nature Communications. 14, 3968.

2023 | Published | Journal Article | IST-REx-ID: 13212 |

Chen H, Li L, Zou M, Qi L, Friml J. 2023. Distinct functions of TIR1 and AFB1 receptors in auxin signalling. Molecular Plant. 16(7), 1117–1119.

2023 | Published | Journal Article | IST-REx-ID: 13096 |

Degen M, Santos JC, Pluhackova K, Cebrero G, Ramos S, Jankevicius G, Hartenian E, Guillerm U, Mari SA, Kohl B, Müller DJ, Schanda P, Maier T, Perez C, Sieben C, Broz P, Hiller S. 2023. Structural basis of NINJ1-mediated plasma membrane rupture in cell death. Nature. 618, 1065–1071.

2023 | Draft | Preprint | IST-REx-ID: 13312 |

Valentini M, Sagi O, Baghumyan L, Gijsel T de, Jung J, Calcaterra S, Ballabio A, Servin JA, Aggarwal K, Janik M, Adletzberger T, Souto RS, Leijnse M, Danon J, Schrade C, Bakkers E, Chrastina D, Isella G, Katsaros G. Radio frequency driven superconducting diode and parity conserving Cooper pair transport in a two-dimensional germanium hole gas. arXiv, 2306.07109.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2023 | Published | Journal Article | IST-REx-ID: 13264 |

Phan DT, Falthansl-Scheinecker P, Mishra U, Strickland WM, Langone D, Shabani J, Higginbotham AP. 2023. Gate-tunable superconductor-semiconductor parametric amplifier. Physical Review Applied. 19(6), 064032.

2023 | Published | Journal Article | IST-REx-ID: 13202 |

Eguchi K, Le Monnier E, Shigemoto R. 2023. Nanoscale phosphoinositide distribution on cell membranes of mouse cerebellar neurons. The Journal of Neuroscience. 43(23), 4197–4216.

2023 | Published | Journal Article | IST-REx-ID: 13127 |

Casillas Perez BE, Bodova K, Grasse AV, Tkačik G, Cremer S. 2023. Dynamic pathogen detection and social feedback shape collective hygiene in ants. Nature Communications. 14, 3232.

2023 | Published | Thesis | IST-REx-ID: 13107 |

Knaus, Lisa, The metabolism of the developing brain : How large neutral amino acids modulate perinatal neuronal excitability and survival. 2023

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 13117 |

Redchenko E, Poshakinskiy AV, Sett R, Zemlicka M, Poddubny AN, Fink JM. 2023. Tunable directional photon scattering from a pair of superconducting qubits. Nature Communications. 14, 2998.

2023 | Published | Thesis | IST-REx-ID: 13074 |

Krumes A. 2023. Efficiency and generalization of sparse neural networks. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 13081 |

Bocanegra L. 2023. Epithelial dynamics during mouse neural tube development. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 12817 |

Danzl JG. 2023. Research data for the publication ‘Dense 4D nanoscale reconstruction of living brain tissue’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:12817.

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 12945 |

Cremer S. 2023. Data from: ‘Dynamic pathogen detection and social feedback shape collective hygiene in ants’ , Institute of Science and Technology Austria, 10.15479/AT:ISTA:12945.

View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 13175 |

Sahu, Rishabh, Cavity quantum electrooptics. 2023

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 12900

Sahu, Rishabh, Cavity quantum electrooptics. 2023

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 12897 |

Hafner C. 2023. Inverse shape design with parametric representations: Kirchhoff Rods and parametric surface models. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 12891 |

Schauer A. 2023. Mesendoderm formation in zebrafish gastrulation: The role of extraembryonic tissues. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Conference Paper | IST-REx-ID: 17378 |

Frantar E, Ashkboos S, Hoefler T, Alistarh D-A. 2023. OPTQ: Accurate post-training quantization for generative pre-trained transformers. 11th International Conference on Learning Representations . ICLR: International Conference on Learning Representations.

[Published Version] View | Files available

2023 | Published | Conference Paper | IST-REx-ID: 13053 |

Krumes A, Vladu A, Kurtic E, Lampert C, Alistarh D-A. 2023. CrAM: A Compression-Aware Minimizer. 11th International Conference on Learning Representations . ICLR: International Conference on Learning Representations.

[Published Version] View | Files available | Download Published Version (ext.) | arXiv

2023 | Published | Book Chapter | IST-REx-ID: 13052

Leithner AF, Merrin J, Sixt MK. 2023.En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses. In: The Immune Synapse. Methods in Molecular Biology, vol. 2654, 137–147.

View | DOI | PubMed | Europe PMC

2023 | Published | Thesis | IST-REx-ID: 12885 |

Calcabrini M. 2023. Nanoparticle-based semiconductor solids: From synthesis to consolidation. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12802 |

Knaus L, Basilico B, Malzl D, Gerykova Bujalkova M, Smogavec M, Schwarz LA, Gorkiewicz S, Amberg N, Pauler F, Knittl-Frank C, Tassinari M, Maulide N, Rülicke T, Menche J, Hippenmeyer S, Novarino G. 2023. Large neutral amino acid levels tune perinatal neuronal excitability and survival. Cell. 186(9), 1950–1967.e25.

2023 | Published | Thesis | IST-REx-ID: 12826 |

Pokusaeva, Victoria, Neural control of optic flow-based navigation in Drosophila melanogaster. 2023

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12830 |

Huljev K, Shamipour S, Nunes Pinheiro DC, Preusser F, Steccari I, Sommer CM, Naik S, Heisenberg C-PJ. 2023. A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish. Developmental Cell. 58(7), 582–596.e7.

2023 | Published | Thesis | IST-REx-ID: 12809 |

Alcarva C. 2023. Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12832

He R, Yang L, Zhang Y, Wang X, Lee S, Zhang T, Li L, Liang Z, Chen J, Li J, Ostovari Moghaddam A, Llorca J, Ibáñez M, Arbiol J, Xu Y, Cabot A. 2023. A CrMnFeCoNi high entropy alloy boosting oxygen evolution/reduction reactions and zinc-air battery performance. Energy Storage Materials. 58(4), 287–298.

View | DOI | WoS

2023 | Published | Journal Article | IST-REx-ID: 12349 |

Gupta D, Mlynarski WF, Sumser AL, Symonova O, Svaton J, Jösch MA. 2023. Panoramic visual statistics shape retina-wide organization of receptive fields. Nature Neuroscience. 26, 606–614.

2023 | Published | Thesis | IST-REx-ID: 12726

Riedl M. 2023. Synchronization in collectively moving active matter. Institute of Science and Technology Austria.

View | Files available | DOI

2023 | Published | Thesis | IST-REx-ID: 12781 |

Kravchuk V. 2023. Structural and mechanistic study of bacterial complex I and its cyanobacterial ortholog. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12749

Cikes D, Elsayad K, Sezgin E, Koitai E, Ferenc T, Orthofer M, Yarwood R, Heinz LX, Sedlyarov V, Darwish-Miranda N, Taylor A, Grapentine S, al-Murshedi F, Abot A, Weidinger A, Kutchukian C, Sanchez C, Cronin SJF, Novatchkova M, Kavirayani A, Schuetz T, Haubner B, Haas L, Hagelkruys A, Jackowski S, Kozlov A, Jacquemond V, Knauf C, Superti-Furga G, Rullman E, Gustafsson T, McDermot J, Lowe M, Radak Z, Chamberlain JS, Bakovic M, Banka S, Penninger JM. 2023. PCYT2-regulated lipid biosynthesis is critical to muscle health and ageing. Nature Metabolism.

View | DOI

2023 | Published | Thesis | IST-REx-ID: 12732 |

Brighi, Pietro, Ergodicity breaking in disordered and kinetically constrained quantum many-body systems. 2023

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12759 |

Rothman JS, Borges Merjane C, Holderith N, Jonas PM, Angus Silver R. 2023. Validation of a stereological method for estimating particle size and density from 2D projections with high accuracy. PLoS ONE. 18(3 March), e0277148.

2023 | Published | Thesis | IST-REx-ID: 12716 |

Burnett L. 2023. To flee, or not to flee? Using innate defensive behaviours to investigate rapid perceptual decision-making through subcortical circuits in mouse models of autism. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12543 |

Stock M, Milutinovic B, Hönigsberger M, Grasse AV, Wiesenhofer F, Kampleitner N, Narasimhan M, Schmitt T, Cremer S. 2023. Pathogen evasion of social immunity. Nature Ecology and Evolution. 7, 450–460.

2023 | Published | Journal Article | IST-REx-ID: 12789 |

Mujica N, Waitukaitis SR. 2023. Accurate determination of the shapes of granular charge distributions. Physical Review E. 107(3), 034901.

2023 | Published | Thesis | IST-REx-ID: 12491 |

Zens B. 2023. Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 12370 |

Gupta D, Sumser AL, Jösch MA. 2023. Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields, Institute of Science and Technology Austria, 10.15479/AT:ISTA:12370.

[Published Version] View | Files available | DOI

2023 | Published | Journal Article | IST-REx-ID: 12334 |

Fäßler F, Javoor M, Datler J, Döring H, Hofer F, Dimchev GA, Hodirnau V-V, Faix J, Rottner K, Schur FK. 2023. ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning. Science Advances. 9(3), add6495.

2023 | Published | Thesis | IST-REx-ID: 12470 |

Michalska JM. 2023. A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 12109 |

Pertl F, Sobarzo Ponce JCA, Shafeek LB, Cramer T, Waitukaitis SR. 2022. Quantifying nanoscale charge density features of contact-charged surfaces with an FEM/KPFM-hybrid approach. Physical Review Materials. 6(12), 125605.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2022 | Published | Journal Article | IST-REx-ID: 12495 |

Iofinova EB, Konstantinov NH, Lampert C. 2022. FLEA: Provably robust fair multisource learning from unreliable training data. Transactions on Machine Learning Research.

[Published Version] View | Files available | Download Published Version (ext.) | arXiv

2022 | Published | Journal Article | IST-REx-ID: 12572 |

Iofinova EB, Konstantinov NH, Lampert C. 2022. FLEA: Provably robust fair multisource learning from unreliable training data. fg.

[Published Version] View | Files available | Download Published Version (ext.)

2022 | Published | Journal Article | IST-REx-ID: 12117 |

Hübschmann V, Korkut M, Siegert S. 2022. Assessing human iPSC-derived microglia identity and function by immunostaining, phagocytosis, calcium activity, and inflammation assay. STAR Protocols. 3(4), 101866.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 12118 |

Valentini M, Borovkov M, Prada E, Martí-Sánchez S, Botifoll M, Hofmann AC, Arbiol J, Aguado R, San-Jose P, Katsaros G. 2022. Majorana-like Coulomb spectroscopy in the absence of zero-bias peaks. Nature. 612(7940), 442–447.

2022 | Published | Journal Article | IST-REx-ID: 12209 |

Nunes Pinheiro DC, Kardos R, Hannezo EB, Heisenberg C-PJ. 2022. Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming. Nature Physics. 18(12), 1482–1493.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Thesis | IST-REx-ID: 12378 |

Colombo G. 2022. MorphOMICs, a tool for mapping microglial morphology, reveals brain region- and sex-dependent phenotypes. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 12143 |

Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.

2022 | Published | Journal Article | IST-REx-ID: 12142 |

Ojavee SE, Kutalik Z, Robinson MR. 2022. Liability-scale heritability estimation for biobank studies of low-prevalence disease. The American Journal of Human Genetics. 109(11), 2009–2017.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 12144 |

Qi L, Kwiatkowski M, Chen H, Hörmayer L, Sinclair SA, Zou M, del Genio CI, Kubeš MF, Napier R, Jaworski K, Friml J. 2022. Adenylate cyclase activity of TIR1/AFB auxin receptors in plants. Nature. 611(7934), 133–138.

2022 | Published | Journal Article | IST-REx-ID: 11336 |

Amberg N, Pauler F, Streicher C, Hippenmeyer S. 2022. Tissue-wide genetic and cellular landscape shapes the execution of sequential PRC2 functions in neural stem cell lineage progression. Science Advances. 8(44), abq1263.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 12239 |

Johnson AJ, Kaufmann W, Sommer CM, Costanzo T, Dahhan DA, Bednarek SY, Friml J. 2022. Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution. Molecular Plant. 15(10), 1533–1542.

2022 | Published | Journal Article | IST-REx-ID: 12244 |

Colombo G, Cubero RJ, Kanari L, Venturino A, Schulz R, Scolamiero M, Agerberg J, Mathys H, Tsai L-H, Chachólski W, Hess K, Siegert S. 2022. A tool for mapping microglial morphology, morphOMICs, reveals brain-region and sex-dependent phenotypes. Nature Neuroscience. 25(10), 1379–1393.

2022 | Published | Journal Article | IST-REx-ID: 12248 |

Elkrewi MN, Khauratovich U, Toups MA, Bett VK, Mrnjavac A, Macon A, Fraisse C, Sax L, Huylmans AK, Hontoria F, Vicoso B. 2022. ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp. Genetics. 222(2), iyac123.

2022 | Published | Thesis | IST-REx-ID: 12368 |

Arslan FN. 2022. Remodeling of E-cadherin-mediated contacts via cortical flows. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 12366 |

Redchenko E. 2022. Controllable states of superconducting Qubit ensembles. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 12358 |

Sperl G. 2022. Homogenizing yarn simulations: Large-scale mechanics, small-scale detail, and quantitative fitting. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 12138 |

Kravchuk V, Petrova O, Kampjut D, Wojciechowska-Bason A, Breese Z, Sazanov LA. 2022. A universal coupling mechanism of respiratory complex I. Nature. 609(7928), 808–814.

2022 | Published | Journal Article | IST-REx-ID: 12288 |

Sumser AL, Jösch MA, Jonas PM, Ben Simon Y. 2022. Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling. eLife. 11, 79848.

2022 | Published | Journal Article | IST-REx-ID: 12291 |

Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.

2022 | Published | Journal Article | IST-REx-ID: 12262 |

Prattes M, Grishkovskaya I, Hodirnau V-V, Hetzmannseder C, Zisser G, Sailer C, Kargas V, Loibl M, Gerhalter M, Kofler L, Warren AJ, Stengel F, Haselbach D, Bergler H. 2022. Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1. Nature Structural & Molecular Biology. 29(9), 942–953.

2022 | Published | Journal Article | IST-REx-ID: 12261 |

Angermayr A, Pang TY, Chevereau G, Mitosch K, Lercher MJ, Bollenbach MT. 2022. Growth‐mediated negative feedback shapes quantitative antibiotic response. Molecular Systems Biology. 18(9), e10490.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 12082 |

Artan M, Hartl M, Chen W, de Bono M. 2022. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Journal of Biological Chemistry. 298(9), 102343.

2022 | Published | Journal Article | IST-REx-ID: 12065 |

Prehal C, Mondal S, Lovicar L, Freunberger SA. 2022. Exclusive solution discharge in Li-O₂ batteries? ACS Energy Letters. 7(9), 3112–3119.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 11705 |

Chang C, Liu Y, Lee S, Spadaro M, Koskela KM, Kleinhanns T, Costanzo T, Arbiol J, Brutchey RL, Ibáñez M. 2022. Surface functionalization of surfactant-free particles: A strategy to tailor the properties of nanocomposites for enhanced thermoelectric performance. Angewandte Chemie - International Edition. 61(35), e202207002.

2022 | Published | Thesis | IST-REx-ID: 11945 |

Schulz R. 2022. Chimeric G protein-coupled receptors mimic distinct signaling pathways and modulate microglia function. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 11879 |

Artner C. 2022. Modulation of auxin transport via ZF proteins adjust plant response to high ambient temperature. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 11951 |

Ben Simon Y, Käfer K, Velicky P, Csicsvari JL, Danzl JG, Jonas PM. 2022. A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory. Nature Communications. 13, 4826.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 11995 |

Schulz R, Korkut M, Venturino A, Colombo G, Siegert S. 2022. Chimeric GPCRs mimic distinct signaling pathways and modulate microglia responses. Nature Communications. 13, 4728.

2022 | Published | Journal Article | IST-REx-ID: 12174 |

Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.

[Published Version] View | DOI | Download Published Version (ext.) | WoS

2022 | Published | Journal Article | IST-REx-ID: 11843 |

Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. 2022. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. eLife. 11, e78995.

2022 | Published | Journal Article | IST-REx-ID: 11734 |

Abualia, Rashed, Molecular framework integrating nitrate sensing in root and auxin-guided shoot adaptive responses. Proceedings of the National Academy of Sciences of the United States of America 119 (31). 2022

2022 | Published | Journal Article | IST-REx-ID: 11736 |

Sperl G, Sánchez-Banderas RM, Li M, Wojtan C, Otaduy MA. 2022. Estimation of yarn-level simulation models for production fabrics. ACM Transactions on Graphics. 41(4), 65.

[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS

2022 | Published | Journal Article | IST-REx-ID: 11478 |

Bartalska K, Hübschmann V, Korkut M, Cubero RJ, Venturino A, Rössler K, Czech T, Siegert S. 2022. A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation. iScience. 25(7), 104580.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 9794 |

Assen FP, Abe J, Hons M, Hauschild R, Shamipour S, Kaufmann W, Costanzo T, Krens G, Brown M, Ludewig B, Hippenmeyer S, Heisenberg C-PJ, Weninger W, Hannezo EB, Luther SA, Stein JV, Sixt MK. 2022. Multitier mechanics control stromal adaptations in swelling lymph nodes. Nature Immunology. 23, 1246–1255.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 10791 |

Hansen, Andi H, Tissue-wide effects override cell-intrinsic gene function in radial neuron migration. Oxford Open Neuroscience 1 (1). 2022

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 11473 |

Mysliwy K. 2022. Polarons in Bose gases and polar crystals: Some rigorous energy estimates. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 11411 |

Surendranadh P, Arathoon LS, Baskett C, Field D, Pickup M, Barton NH. 2022. Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus. Genetics. 221(3), iyac083.

2022 | Published | Journal Article | IST-REx-ID: 11469 |

Brighi P, Michailidis A, Kirova K, Abanin DA, Serbyn M. 2022. Localization of a mobile impurity interacting with an Anderson insulator. Physical Review B. 105(22), 224208.

2022 | Published | Journal Article | IST-REx-ID: 11470 |

Brighi P, Michailidis AA, Abanin DA, Serbyn M. 2022. Propagation of many-body localization in an Anderson insulator. Physical Review B. 105(22), L220203.

2022 | Published | Journal Article | IST-REx-ID: 10841 |

Dahhan, DA, Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components. Plant Cell 34 (6). 2022

2022 | Published | Journal Article | IST-REx-ID: 11155 |

Obr M, Hagen WJH, Dick RA, Yu L, Kotecha A, Schur FK. 2022. Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs. Journal of Structural Biology. 214(2), 107852.

2022 | Published | Thesis | IST-REx-ID: 11393 |

Jevtic M. 2022. Contextual fear learning induced changes in AMPA receptor subtypes along the proximodistal axis in dorsal hippocampus. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 11373 |

Radler P, Baranova NS, Dos Santos Caldas PR, Sommer CM, Lopez Pelegrin MD, Michalik D, Loose M. 2022. In vitro reconstitution of Escherichia coli divisome activation. Nature Communications. 13, 2635.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 11448 |

Gonzalez Somermeyer L, Fleiss A, Mishin AS, Bozhanova NG, Igolkina AA, Meiler J, Alaball Pujol M-E, Putintseva EV, Sarkisyan KS, Kondrashov F. 2022. Heterogeneity of the GFP fitness landscape and data-driven protein design. eLife. 11, 75842.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 11341 |

Lukacisin M, Espinosa-Cantú A, Bollenbach MT. 2022. Intron-mediated induction of phenotypic heterogeneity. Nature. 605, 113–118.

2022 | Published | Journal Article | IST-REx-ID: 11432 |

Schreck C, Wojtan C. 2022. Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method. Computer Graphics Forum. 41(2), 343–353.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

2022 | Published | Journal Article | IST-REx-ID: 10922 |

Liu Z, Hu J, Xu H, Song P, Zhang R, Bickel B, Fu C-W. 2022. Worst-case rigidity analysis and optimization for assemblies with mechanical joints. Computer Graphics Forum. 41(2), 507–519.

[Submitted Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 10713 |

Akhmanova M, Emtenani S, Krueger D, György A, Pereira Guarda M, Vlasov M, Vlasov F, Akopian A, Ratheesh A, De Renzis S, Siekhaus DE. 2022. Cell division in tissues enables macrophage infiltration. Science. 376(6591), 394–396.

2022 | Published | Thesis | IST-REx-ID: 11196 |

Kim O. 2022. Nanoarchitecture of hippocampal mossy fiber-CA3 pyramidal neuron synapses. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 11193 |

Wachner S. 2022. Transcriptional regulation by Dfos and BMP-signaling support tissue invasion of Drosophila immune cells. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Thesis | IST-REx-ID: 11128 |

Matejovicova L. 2022. Genetic basis of flower colour as a model for adaptive evolution. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 11160 |

Villa CE, Cheroni C, Dotter C, López-Tóbon A, Oliveira B, Sacco R, Yahya AÇ, Morandell J, Gabriele M, Tavakoli M, Lyudchik J, Sommer CM, Gabitto M, Danzl JG, Testa G, Novarino G. 2022. CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Reports. 39(1), 110615.

2022 | Research Data | IST-REx-ID: 10934 |

Radler P. 2022. In vitro reconstitution of Escherichia coli divisome activation, Institute of Science and Technology Austria, 10.15479/AT:ISTA:10934.

[Submitted Version] View | Files available | DOI

2022 | Published | Journal Article | IST-REx-ID: 10920 |

Jirovec D, Mutter PM, Hofmann AC, Crippa A, Rychetsky M, Craig DL, Kukucka J, Martins F, Ballabio A, Ares N, Chrastina D, Isella G, Burkard G, Katsaros G. 2022. Dynamics of hole singlet-triplet qubits with large g-factor differences. Physical Review Letters. 128(12), 126803.

2022 | Published | Journal Article | IST-REx-ID: 10918 |

Emtenani S, Martin ET, György A, Bicher J, Genger J-W, Köcher T, Akhmanova M, Pereira Guarda M, Roblek M, Bergthaler A, Hurd TR, Rangan P, Siekhaus DE. 2022. Macrophage mitochondrial bioenergetics and tissue invasion are boosted by an Atossa-Porthos axis in Drosophila. The Embo Journal. 41, e109049.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 10851 |

Phan DT, Senior JL, Ghazaryan A, Hatefipour M, Strickland WM, Shabani J, Serbyn M, Higginbotham AP. 2022. Detecting induced p±ip pairing at the Al-InAs interface with a quantum microwave circuit. Physical Review Letters. 128(10), 107701.

2022 | Published | Journal Article | IST-REx-ID: 10924 |

Sahu R, Hease WJ, Rueda Sanchez AR, Arnold GM, Qiu L, Fink JM. 2022. Quantum-enabled operation of a microwave-optical interface. Nature Communications. 13, 1276.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 | Published | Journal Article | IST-REx-ID: 10639 |

Windhaber S, Xin Q, Uckeley ZM, Koch J, Obr M, Garnier C, Luengo-Guyonnot C, Duboeuf M, Schur FK, Lozach P-Y. 2022. The Orthobunyavirus Germiston enters host cells from late endosomes. Journal of Virology. 96(5), e02146-21.

2022 | Published | Journal Article | IST-REx-ID: 10826 |

Valperga G, de Bono M. 2022. Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans. eLife. 11, e68040.

2022 | Published | Journal Article | IST-REx-ID: 10766 |

Slovakova, Jana, Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells. Proceedings of the National Academy of Sciences of the United States of America 119 (8). 2022

[Published Version] View | Files available | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 10712 |

Roblek M, Bicher J, van Gogh M, György A, Seeböck R, Szulc B, Damme M, Olczak M, Borsig L, Siekhaus DE. 2022. The solute carrier MFSD1 decreases β1 integrin’s activation status and thus tumor metastasis. Frontiers in Oncology. 12, 777634.

[Published Version] View | Files available | DOI | WoS

2022 | Published | Thesis | IST-REx-ID: 10727 |

Metzler S. 2022. Pathogen-mediated sexual selection and immunization in ant colonies. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2022 | Published | Conference Paper | IST-REx-ID: 10752

Lampert J, Lampert C. 2022. Overcoming rare-language discrimination in multi-lingual sentiment analysis. 2021 IEEE International Conference on Big Data. Big Data: International Conference on Big Data, 5185–5192.

View | DOI | WoS

2022 | Published | Journal Article | IST-REx-ID: 10703 |

Gaertner, Florian, WASp triggers mechanosensitive actin patches to facilitate immune cell migration in dense tissues. Developmental Cell 57 (1). 2022

2022 | Published | Journal Article | IST-REx-ID: 10709 |

Belyaeva V, Wachner S, György A, Emtenani S, Gridchyn I, Akhmanova M, Linder M, Roblek M, Sibilia M, Siekhaus DE. 2022. Fos regulates macrophage infiltration against surrounding tissue resistance by a cortical actin-based mechanism in Drosophila. PLoS Biology. 20(1), e3001494.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2022 | Published | Journal Article | IST-REx-ID: 10614 |

2022 | Published | Journal Article | IST-REx-ID: 10654 |

Klotz L, Lemoult GM, Avila K, Hof B. 2022. Phase transition to turbulence in spatially extended shear flows. Physical Review Letters. 128(1), 014502.

2022 | Published | Journal Article | IST-REx-ID: 10284 |

Casillas Perez BE, Pull C, Naiser F, Naderlinger E, Matas J, Cremer S. 2022. Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies. Ecology Letters. 25(1), 89–100.

2021 | Published | Journal Article | IST-REx-ID: 10123 |

Liu Y, Calcabrini M, Yu Y, Genç A, Chang C, Costanzo T, Kleinhanns T, Lee S, Llorca J, Cojocaru‐Mirédin O, Ibáñez M. 2021. The importance of surface adsorbates in solution‐processed thermoelectric materials: The case of SnSe. Advanced Materials. 33(52), 2106858.

2021 | Published | Journal Article | IST-REx-ID: 10606 |

Godard BG, Dumollard R, Heisenberg C-PJ, Mcdougall A. 2021. Combined effect of cell geometry and polarity domains determines the orientation of unequal division. eLife. 10, e75639.

2021 | Published | Journal Article | IST-REx-ID: 10565 |

Venturino, Alessandro, Minimally invasive protocols and quantification for microglia-mediated perineuronal net disassembly in mouse brain. STAR Protocols 2 (4). 2021

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 10816 |

Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. 2021. How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network. Nature Computational Science. 1(12), 830–842.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)

2021 | Published | Journal Article | IST-REx-ID: 9887 |

Johnson, Alexander J, The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis. Proceedings of the National Academy of Sciences of the United States of America 118 (51). 2021

2021 | Published | Journal Article | IST-REx-ID: 10655 |

Maes ME, Wögenstein GM, Colombo G, Casado Polanco R, Siegert S. 2021. Optimizing AAV2/6 microglial targeting identified enhanced efficiency in the photoreceptor degenerative environment. Molecular Therapy - Methods and Clinical Development. 23, 210–224.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Conference Paper | IST-REx-ID: 11458 |

Krumes A, Iofinova EB, Vladu A, Alistarh D-A. 2021. AC/DC: Alternating Compressed/DeCompressed training of deep neural networks. 35th Conference on Neural Information Processing Systems. NeurIPS: Neural Information Processing Systems, Advances in Neural Information Processing Systems, vol. 34, 8557–8570.

[Published Version] View | Files available | Download Published Version (ext.) | arXiv

2021 | Published | Journal Article | IST-REx-ID: 10535 |

Bodova K, Szep E, Barton NH. 2021. Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. 17(12), e1009661.

2021 | Published | Journal Article | IST-REx-ID: 9928 |

Peruzzo M, Hassani F, Szep G, Trioni A, Redchenko E, Zemlicka M, Fink JM. 2021. Geometric superinductance qubits: Controlling phase delocalization across a single Josephson junction. PRX Quantum. 2(4), 040341.

[Published Version] View | Files available | DOI | WoS | arXiv

2021 | Published | Thesis | IST-REx-ID: 10303 |

Abualia R. 2021. Role of hormones in nitrate regulated growth. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Thesis | IST-REx-ID: 10307 |

Tomasek K. 2021. Pathogenic Escherichia coli hijack the host immune response. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 10223 |

Li, Lanxin, Cell surface and intracellular auxin signalling for H<sup>+</sup> fluxes in root growth. Nature 599 (7884). 2021

2021 | Published | Journal Article | IST-REx-ID: 10321 |

Amberg N, Hippenmeyer S. 2021. Genetic mosaic dissection of candidate genes in mice using mosaic analysis with double markers. STAR Protocols. 2(4), 100939.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 10290 |

Dimchev GA, Amiri B, Fäßler F, Falcke M, Schur FK. 2021. Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data. Journal of Structural Biology. 213(4), 107808.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Thesis | IST-REx-ID: 10199 |

Toman V. 2021. Improved verification techniques for concurrent systems. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Book Chapter | IST-REx-ID: 10268

Hörmayer L, Friml J, Glanc M. 2021.Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy. In: Plant Cell Division. Methods in Molecular Biology, vol. 2382, 105–114.

View | DOI | PubMed | Europe PMC

2021 | Draft | Preprint | IST-REx-ID: 10316 |

Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. bioRxiv, 10.1101/2021.10.18.464770.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2021 | Published | Journal Article | IST-REx-ID: 10146

Vercellino I, Sazanov LA. 2021. Structure and assembly of the mammalian mitochondrial supercomplex CIII₂CIV. Nature. 598(7880), 364–367.

2021 | Published | Journal Article | IST-REx-ID: 9376 |

Zhang R, Auzinger T, Bickel B. 2021. Computational design of planar multistable compliant structures. ACM Transactions on Graphics. 40(5), 186.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Thesis | IST-REx-ID: 10058 |

Jirovec D. 2021. Singlet-Triplet qubits and spin-orbit interaction in 2-dimensional Ge hole gases. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 10166 |

Huylmans AK, Macon A, Hontoria F, Vicoso B. 2021. Transitions to asexuality and evolution of gene expression in Artemia brine shrimp. Proceedings of the Royal Society B: Biological Sciences. 288(1959), 20211720.

2021 | Published | Thesis | IST-REx-ID: 10030 |

Portinale L. 2021. Discrete-to-continuum limits of transport problems and gradient flows in the space of measures. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 10073 |

Chang C, Ibáñez M. 2021. Enhanced thermoelectric performance by surface engineering in SnTe-PbS nanocomposites. Materials. 14(18), 5416.

2021 | Published | Thesis | IST-REx-ID: 9992 |

Hörmayer L. 2021. Wound healing in the Arabidopsis root meristem. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Accepted | Preprint | IST-REx-ID: 10095 |

Li L, Verstraeten I, Roosjen M, Takahashi K, Rodriguez Solovey L, Merrin J, Chen J, Shabala L, Smet W, Ren H, Vanneste S, Shabala S, De Rybel B, Weijers D, Kinoshita T, Gray WM, Friml J. Cell surface and intracellular auxin signalling for H+-fluxes in root growth. Research Square, 266395.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2021 | Published | Thesis | IST-REx-ID: 9920 |

Peruzzo M. 2021. Geometric superinductors and their applications in circuit quantum electrodynamics. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 9818 |

Sperl G, Narain R, Wojtan C. 2021. Mechanics-aware deformation of yarn pattern geometry. ACM Transactions on Graphics. 40(4), 168.

[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS

2021 | Published | Journal Article | IST-REx-ID: 9907 |

Labajová, Naďa, Cardiolipin-containing lipid membranes attract the bacterial cell division protein diviva. International Journal of Molecular Sciences 22 (15). 2021

2021 | Published | Journal Article | IST-REx-ID: 8909 |

Jirovec D, Hofmann AC, Ballabio A, Mutter PM, Tavani G, Botifoll M, Crippa A, Kukucka J, Sagi O, Martins F, Saez Mollejo J, Prieto Gonzalez I, Borovkov M, Arbiol J, Chrastina D, Isella G, Katsaros G. 2021. A singlet triplet hole spin qubit in planar Ge. Nature Materials. 20(8), 1106–1112.

2021 | Published | Thesis | IST-REx-ID: 9728 |

Agrawal N. 2021. Transition to turbulence and drag reduction in particle-laden pipe flows. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Draft | Preprint | IST-REx-ID: 10066 |

Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Kruijf M de, Carballido MJ, Svab S, Kuhlmann AV, Braakman FR, Geyer S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs GAD, Ares N. Cross-architecture tuning of silicon and SiGe-based quantum devices using machine learning. arXiv, 2107.12975.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2021 | Draft | Preprint | IST-REx-ID: 10029 |

Phan DT, Senior JL, Ghazaryan A, Hatefipour M, Strickland WM, Shabani J, Serbyn M, Higginbotham AP. Breakdown of induced p±ip pairing in a superconductor-semiconductor hybrid. arXiv, 2107.03695.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2021 | Published | Journal Article | IST-REx-ID: 9642 |

Venturino A, Schulz R, De Jesús-Cortés H, Maes ME, Nagy B, Reilly-Andújar F, Colombo G, Cubero RJ, Schoot Uiterkamp FE, Bear MF, Siegert S. 2021. Microglia enable mature perineuronal nets disassembly upon anesthetic ketamine exposure or 60-Hz light entrainment in the healthy brain. Cell Reports. 36(1), 109313.

2021 | Published | Journal Article | IST-REx-ID: 8910 |

Valentini, Marco, Nontopological zero-bias peaks in full-shell nanowires induced by flux-tunable Andreev states. Science 373 (6550). 2021

2021 | Published | Thesis | IST-REx-ID: 9623 |

Caballero Mancebo S. 2021. Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 9603 |

Contreras X, Amberg N, Davaatseren A, Hansen AH, Sonntag J, Andersen L, Bernthaler T, Streicher C, Heger A-M, Johnson RL, Schwarz LA, Luo L, Rülicke T, Hippenmeyer S. 2021. A genome-wide library of MADM mice for single-cell genetic mosaic analysis. Cell Reports. 35(12), 109274.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Journal Article | IST-REx-ID: 10167 |

Elkrewi MN, Moldovan MA, Picard MAL, Vicoso B. 2021. Schistosome W-linked genes inform temporal dynamics of sex chromosome evolution and suggest candidate for sex determination. Molecular Biology and Evolution. 138(12), 5345–58.

2021 | Published | Journal Article | IST-REx-ID: 9558 |

Yalniz G, Hof B, Budanur NB. 2021. Coarse graining the state space of a turbulent flow using periodic orbits. Physical Review Letters. 126(24), 244502.

2021 | Published | Journal Article | IST-REx-ID: 9540 |

Prattes M, Grishkovskaya I, Hodirnau V-V, Rössler I, Klein I, Hetzmannseder C, Zisser G, Gruber CC, Gruber K, Haselbach D, Bergler H. 2021. Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine. Nature Communications. 12(1), 3483.

2021 | Published | Journal Article | IST-REx-ID: 9449 |

Jirovec D, Hofmann AC, Ballabio A, Mutter PM, Tavani Giulio, Botifoll M, Crippa A, Kukucka J, Sagi O, Martins F, Saez Mollejo J, Prieto Gonzalez I, Borovkov M, Arbio J, Chrastina D, Isella G, Katsaros G. 2021. A singlet-triplet hole spin qubit in planar Ge. Nature Materials.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | arXiv

2021 | Published | Thesis | IST-REx-ID: 9562 |

Kleindienst D. 2021. 2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 9438 |

Vandael DH, Okamoto Y, Borges Merjane C, Vargas Barroso VM, Suter B, Jonas PM. 2021. Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses. Nature Protocols. 16(6), 2947–2967.

2021 | Published | Journal Article | IST-REx-ID: 9287 |

Narasimhan M, Gallei MC, Tan S, Johnson AJ, Verstraeten I, Li L, Rodriguez Solovey L, Han H, Himschoot E, Wang R, Vanneste S, Sánchez-Simarro J, Aniento F, Adamowski M, Friml J. 2021. Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking. Plant Physiology. 186(2), 1122–1142.

2021 | Published | Thesis | IST-REx-ID: 9418 |

Phuong M. 2021. Underspecification in deep learning. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 9431 |

Obr M, Ricana CL, Nikulin N, Feathers J-PR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FK, Dick RA. 2021. Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer. Nature Communications. 12(1), 3226.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Journal Article | IST-REx-ID: 9429 |

Morandell J, Schwarz LA, Basilico B, Tasciyan S, Dimchev GA, Nicolas A, Sommer CM, Kreuzinger C, Dotter C, Knaus L, Dobler Z, Cacci E, Schur FK, Danzl JG, Novarino G. 2021. Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development. Nature Communications. 12(1), 3058.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Journal Article | IST-REx-ID: 9778 |

Vandael DH, Okamoto Y, Jonas PM. 2021. Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses. Nature Communications. 12(1), 2912.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Journal Article | IST-REx-ID: 10559 |

Aggarwal K, Hofmann AC, Jirovec D, Prieto Gonzalez I, Sammak A, Botifoll M, Martí-Sánchez S, Veldhorst M, Arbiol J, Scappucci G, Danon J, Katsaros G. 2021. Enhancement of proximity-induced superconductivity in a planar Ge hole gas. Physical Review Research. 3(2), L022005.

[Published Version] View | Files available | DOI | arXiv

2021 | Published | Journal Article | IST-REx-ID: 9301 |

Prehal, Christian, In situ small-angle X-ray scattering reveals solution phase discharge of Li–O2 batteries with weakly solvating electrolytes. Proceedings of the National Academy of Sciences of the United States of America 118 (14). 2021

[Preprint] View | DOI | Download Preprint (ext.) | WoS

2021 | Published | Journal Article | IST-REx-ID: 9330 |

Schöpf, Clemens L., Presynaptic α2δ subunits are key organizers of glutamatergic synapses. Proceedings of the National Academy of Sciences of the United States of America 118 (14). 2021

[Published Version] View | Files available | DOI | WoS

2021 | Published | Journal Article | IST-REx-ID: 9316 |

Petridou, Nicoletta, Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions. Cell 184 (7). 2021

2021 | Published | Journal Article | IST-REx-ID: 9205 |

Kampjut D, Steiner J, Sazanov LA. 2021. Cryo-EM grid optimization for membrane proteins. iScience. 24(3), 102139.

2021 | Published | Journal Article | IST-REx-ID: 9250 |

Petit YK, Mourad E, Prehal C, Leypold C, Windischbacher A, Mijailovic D, Slugovc C, Borisov SM, Zojer E, Brutti S, Fontaine O, Freunberger SA. 2021. Mechanism of mediated alkali peroxide oxidation and triplet versus singlet oxygen formation. Nature Chemistry. 13(5), 465–471.

2021 | Published | Journal Article | IST-REx-ID: 9290 |

Glanc M, Van Gelderen K, Hörmayer L, Tan S, Naramoto S, Zhang X, Domjan D, Vcelarova L, Hauschild R, Johnson AJ, de Koning E, van Dop M, Rademacher E, Janson S, Wei X, Molnar G, Fendrych M, De Rybel B, Offringa R, Friml J. 2021. AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells. Current Biology. 31(9), 1918–1930.

2021 | Published | Journal Article | IST-REx-ID: 9329 |

Zhang X, Schlögl A, Vandael DH, Jonas PM. 2021. MOD: A novel machine-learning optimal-filtering method for accurate and efficient detection of subthreshold synaptic events in vivo. Journal of Neuroscience Methods. 357(6), 109125.

[Published Version] View | Files available | DOI | WoS

2021 | Published | Book Chapter | IST-REx-ID: 9245

Xia P, Heisenberg C-PJ. 2021.Quantifying tissue tension in the granulosa layer after laser surgery. In: Germline Development in the Zebrafish. Methods in Molecular Biology, vol. 2218, 117–128.

View | DOI | PubMed | Europe PMC

2021 | Submitted | Preprint | IST-REx-ID: 9238 |

Emtenani S, Martin ET, György A, Bicher J, Genger J-W, Hurd TR, Köcher T, Bergthaler A, Rangan P, Siekhaus DE. A genetic program boosts mitochondrial function to power macrophage tissue invasion. bioRxiv, 10.1101/2021.02.18.431643.

[Preprint] View | DOI | Download Preprint (ext.)

2021 | Published | Journal Article | IST-REx-ID: 9168 |

Fraisse C, Sachdeva H. 2021. The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes. Genetics. 217(2), iyaa025.

[Published Version] View | DOI | Download Published Version (ext.) | WoS

2021 | Published | Journal Article | IST-REx-ID: 9010 |

Ötvös K, Marconi M, Vega A, O’Brien J, Johnson AJ, Abualia R, Antonielli L, Montesinos López JC, Zhang Y, Tan S, Cuesta C, Artner C, Bouguyon E, Gojon A, Friml J, Gutiérrez RA, Wabnik KT, Benková E. 2021. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport. EMBO Journal. 40(3), e106862.

2021 | Published | Journal Article | IST-REx-ID: 8931 |

Gelová Z, Gallei MC, Pernisová M, Brunoud G, Zhang X, Glanc M, Li L, Michalko J, Pavlovicova Z, Verstraeten I, Han H, Hajny J, Hauschild R, Čovanová M, Zwiewka M, Hörmayer L, Fendrych M, Xu T, Vernoux T, Friml J. 2021. Developmental roles of auxin binding protein 1 in Arabidopsis thaliana. Plant Science. 303, 110750.

2021 | Published | Journal Article | IST-REx-ID: 8988 |

Düllberg, Christian F, In vitro reconstitution reveals phosphoinositides as cargo-release factors and activators of the ARF6 GAP ADAP1. Proceedings of the National Academy of Sciences of the United States of America 118 (1). 2021

2021 | Research Data | IST-REx-ID: 9389 |

Valentini M. 2021. Research data for ‘Non-topological zero bias peaks in full-shell nanowires induced by flux tunable Andreev states’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:9389.

[Published Version] View | Files available | DOI

2021 | Published | Journal Article | IST-REx-ID: 8582 |

Li, Hongjiang, Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana. New Phytologist 229 (1). 2021

[Published Version] View | Files available | DOI | WoS

2020 | Published | Thesis | IST-REx-ID: 8983 |

Emtenani S. 2020. Metabolic regulation of Drosophila macrophage tissue invasion. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 8971 |

Fäßler F, Dimchev GA, Hodirnau V-V, Wan W, Schur FK. 2020. Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction. Nature Communications. 11, 6437.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8957

Godard, Benoit G, Apical relaxation during mitotic rounding promotes tension-oriented cell division. Developmental Cell 55 (6). 2020

2020 | Published | Journal Article | IST-REx-ID: 8978 |

Laukoter S, Amberg N, Pauler F, Hippenmeyer S. 2020. Generation and isolation of single cells from mouse brain with mosaic analysis with double markers-induced uniparental chromosome disomy. STAR Protocols. 1(3), 100215.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2020 | Draft | Preprint | IST-REx-ID: 8831 |

Aggarwal K, Hofmann AC, Jirovec D, Prieto Gonzalez I, Sammak A, Botifoll M, Marti-Sanchez S, Veldhorst M, Arbiol J, Scappucci G, Katsaros G. Enhancement of proximity induced superconductivity in planar Germanium. arXiv, 2012.00322.

[Submitted Version] View | Files available | DOI | arXiv

2020 | Published | Journal Article | IST-REx-ID: 8943 |

Tan S, Di Donato M, Glanc M, Zhang X, Klíma P, Liu J, Bailly A, Ferro N, Petrášek J, Geisler M, Friml J. 2020. Non-steroidal anti-inflammatory drugs target TWISTED DWARF1-regulated actin dynamics and auxin transport-mediated plant development. Cell Reports. 33(9), 108463.

2020 | Published | Journal Article | IST-REx-ID: 8586 |

Fäßler F, Zens B, Hauschild R, Schur FK. 2020. 3D printed cell culture grid holders for improved cellular specimen preparation in cryo-electron microscopy. Journal of Structural Biology. 212(3), 107633.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8562 |

Gavriil K, Guseinov R, Perez Rodriguez J, Pellis D, Henderson PM, Rist F, Pottmann H, Bickel B. 2020. Computational design of cold bent glass façades. ACM Transactions on Graphics. 39(6), 208.

[Submitted Version] View | Files available | DOI | WoS | arXiv

2020 | Research Data | IST-REx-ID: 8761 |

Guseinov R. 2020. Supplementary data for ‘Computational design of cold bent glass façades’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:8761.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 9114 |

Hease WJ, Rueda Sanchez AR, Sahu R, Wulf M, Arnold GM, Schwefel HGL, Fink JM. 2020. Bidirectional electro-optic wavelength conversion in the quantum ground state. PRX Quantum. 1(2), 020315.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Preprint | IST-REx-ID: 9750 |

Slovakova J, Sikora MK, Caballero Mancebo S, Krens G, Kaufmann W, Huljev K, Heisenberg C-PJ. 2020. Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion. bioRxiv, 10.1101/2020.11.20.391284.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2020 | Published | Journal Article | IST-REx-ID: 8581

Pinke, Gergely, Cryo-EM structure of the entire mammalian F-type ATP synthase. Nature Structural and Molecular Biology 27 (11). 2020

2020 | Published | Journal Article | IST-REx-ID: 8737 |

Kampjut D, Sazanov LA. 2020. The coupling mechanism of mammalian respiratory complex I. Science. 370(6516), eabc4209.

2020 | Published | Journal Article | IST-REx-ID: 8721 |

Hajny J, Prat T, Rydza N, Rodriguez Solovey L, Tan S, Verstraeten I, Domjan D, Mazur E, Smakowska-Luzan E, Smet W, Mor E, Nolf J, Yang B, Grunewald W, Molnar G, Belkhadir Y, De Rybel B, Friml J. 2020. Receptor kinase module targets PIN-dependent auxin transport during canalization. Science. 370(6516), 550–557.

2020 | Published | Journal Article | IST-REx-ID: 8755 |

Peruzzo M, Trioni A, Hassani F, Zemlicka M, Fink JM. 2020. Surpassing the resistance quantum with a geometric superinductor. Physical Review Applied. 14(4), 044055.

[Published Version] View | Files available | DOI | WoS | arXiv

2020 | Published | Thesis | IST-REx-ID: 8657 |

Kavcic B. 2020. Perturbations of protein synthesis: from antibiotics to genetics and physiology. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8620 |

Morandell J. 2020. Illuminating the role of Cul3 in autism spectrum disorder pathogenesis. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8589 |

Han H. 2020. Novel insights into PIN polarity regulation during Arabidopsis development. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 8162 |

Laukoter S, Pauler F, Beattie RJ, Amberg N, Hansen AH, Streicher C, Penz T, Bock C, Hippenmeyer S. 2020. Cell-type specificity of genomic imprinting in cerebral cortex. Neuron. 107(6), 1160–1179.e9.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8261 |

Zhang X, Schlögl A, Jonas PM. 2020. Selective routing of spatial information flow from input to output in hippocampal granule cells. Neuron. 107(6), 1212–1225.

2020 | Published | Thesis | IST-REx-ID: 8366 |

Guseinov R. 2020. Computational design of curved thin shells: From glass façades to programmable matter. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Draft | Preprint | IST-REx-ID: 8557 |

Belyaeva V, Wachner S, Gridchyn I, Linder M, Emtenani S, György A, Sibilia M, Siekhaus DE. Cortical actin properties controlled by Drosophila Fos aid macrophage infiltration against surrounding tissue resistance. bioRxiv, 10.1101/2020.09.18.301481.

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2020 | Published | Thesis | IST-REx-ID: 8390 |

Royer A. 2020. Leveraging structure in Computer Vision tasks for flexible Deep Learning models. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8386 |

Zhang R. 2020. Structure-aware computational design and its application to 3D printable volume scattering, mechanism, and multistability. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8358 |

Dos Santos Caldas PR. 2020. Organization and dynamics of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinkers. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8353 |

Steiner J. 2020. Biochemical and structural investigation of the Mrp antiporter, an ancestor of complex I. Institute of Science and Technology Austria.

View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8340 |

Kampjut D. 2020. Molecular mechanisms of mitochondrial redox-coupled proton pumping enzymes. Institute of Science and Technology Austria.

View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8350 |

Shamipour S. 2020. Bulk actin dynamics drive phase segregation in zebrafish oocytes . Institute of Science and Technology Austria.

View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 15061 |

Pinotsis, Nikos, Calcium modulates the domain flexibility and function of an α-actinin similar to the ancestral α-actinin. Proceedings of the National Academy of Sciences of the United States of America 117 (36). 2020

[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC

2020 | Published | Journal Article | IST-REx-ID: 8529 |

Arnold GM, Wulf M, Barzanjeh S, Redchenko E, Rueda Sanchez AR, Hease WJ, Hassani F, Fink JM. 2020. Converting microwave and telecom photons with a silicon photonic nanomechanical interface. Nature Communications. 11, 4460.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Thesis | IST-REx-ID: 8341 |

Bezeljak U. 2020. In vitro reconstitution of a Rab activation switch. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 8142 |

Montesinos López JC, Abuzeineh A, Kopf A, Juanes Garcia A, Ötvös K, Petrášek J, Sixt MK, Benková E. 2020. Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage. The Embo Journal. 39(17), e104238.

2020 | Published | Journal Article | IST-REx-ID: 8336 |

Kubiasova K, Montesinos López JC, Šamajová O, Nisler J, Mik V, Semerádová H, Plíhalová L, Novák O, Marhavý P, Cavallari N, Zalabák D, Berka K, Doležal K, Galuszka P, Šamaj J, Strnad M, Benková E, Plíhal O, Spíchal L. 2020. Cytokinin fluoroprobe reveals multiple sites of cytokinin perception at plasma membrane and endoplasmic reticulum. Nature Communications. 11, 4285.

2020 | Published | Journal Article | IST-REx-ID: 8337 |

Antoniadi I, Novák O, Gelová Z, Johnson AJ, Plíhal O, Simerský R, Mik V, Vain T, Mateo-Bonmatí E, Karady M, Pernisová M, Plačková L, Opassathian K, Hejátko J, Robert S, Friml J, Doležal K, Ljung K, Turnbull C. 2020. Cell-surface receptors enable perception of extracellular cytokinins. Nature Communications. 11, 4284.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8139 |

Johnson AJ, Gnyliukh N, Kaufmann W, Narasimhan M, Vert G, Bednarek S, Friml J. 2020. Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis. Journal of Cell Science. 133(15), jcs248062.

2020 | Published | Journal Article | IST-REx-ID: 8001 |

Vandael DH, Borges Merjane C, Zhang X, Jonas PM. 2020. Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation. Neuron. 107(3), 509–521.

2020 | Published | Journal Article | IST-REx-ID: 8284 |

Steiner J, Sazanov LA. 2020. Structure and mechanism of the Mrp complex, an ancient cation/proton antiporter. eLife. 9, e59407.

2020 | Research Data | IST-REx-ID: 8097 |

Kavcic B. 2020. Analysis scripts and research data for the paper ‘Mechanisms of drug interactions between translation-inhibiting antibiotics’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:8097.

[Published Version] View | Files available | DOI

2020 | Published | Conference Paper | IST-REx-ID: 8724 |

Konstantinov NH, Frantar E, Alistarh D-A, Lampert C. 2020. On the sample complexity of adversarial multi-source PAC learning. Proceedings of the 37th International Conference on Machine Learning. ICML: International Conference on Machine Learning vol. 119, 5416–5425.

[Published Version] View | Files available | arXiv

2020 | Published | Journal Article | IST-REx-ID: 8384 |

Ishida S, Synak P, Narita F, Hachisuka T, Wojtan C. 2020. A model for soap film dynamics with evolving thickness. ACM Transactions on Graphics. 39(4), 31.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS

2020 | Published | Journal Article | IST-REx-ID: 8385 |

Sperl G, Narain R, Wojtan C. 2020. Homogenized yarn-level cloth. ACM Transactions on Graphics. 39(4), 48.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.) | WoS

2020 | Published | Journal Article | IST-REx-ID: 8535 |

Skrivan T, Soderstrom A, Johansson J, Sprenger C, Museth K, Wojtan C. 2020. Wave curves: Simulating Lagrangian water waves on dynamically deforming surfaces. ACM Transactions on Graphics. 39(4), 65.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Conference Paper | IST-REx-ID: 8188 |

Henderson, Paul M, Unsupervised object-centric video generation and decomposition in 3D. 34th Conference on Neural Information Processing Systems 33. 2020

[Preprint] View | Download Preprint (ext.) | arXiv

2020 | Published | Journal Article | IST-REx-ID: 8002 |

Hörmayer, Lukas, Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots. Proceedings of the National Academy of Sciences of the United States of America 117 (26). 2020

2020 | Published | Thesis | IST-REx-ID: 8032 |

Huszár K. 2020. Combinatorial width parameters for 3-dimensional manifolds. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7885

Reversat, Anne, Cellular locomotion using environmental topography. Nature 582. 2020

View | Files available | DOI | WoS

2020 | Published | Preprint | IST-REx-ID: 8545 |

Contreras X, Davaatseren A, Amberg N, Hansen AH, Sonntag J, Andersen L, Bernthaler T, Heger A-M, Johnson R, Schwarz LA, Luo L, Rülicke T, Hippenmeyer S. 2020. A genome-wide library of MADM mice for single-cell genetic mosaic analysis. bioRxiv, 10.1101/2020.06.05.136192.

[Preprint] View | DOI | Download Preprint (ext.)

2020 | Published | Thesis | IST-REx-ID: 7902 |

Contreras X. 2020. Genetic dissection of neural development in health and disease at single cell resolution. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 5681 |

Hikaru, Ibayashi, Simulating liquids on dynamically warping grids. IEEE Transactions on Visualization and Computer Graphics 26 (6). 2020

2020 | Published | Journal Article | IST-REx-ID: 7875 |

Kopf A, Renkawitz J, Hauschild R, Girkontaite I, Tedford K, Merrin J, Thorn-Seshold O, Trauner D, Häcker H, Fischer KD, Kiermaier E, Sixt MK. 2020. Microtubules control cellular shape and coherence in amoeboid migrating cells. The Journal of Cell Biology. 219(6), e201907154.

2020 | Published | Journal Article | IST-REx-ID: 8203 |

Katsaros G, Kukucka J, Vukušić L, Watzinger H, Gao F, Wang T, Zhang J-J, Held K. 2020. Zero field splitting of heavy-hole states in quantum dots. Nano Letters. 20(7), 5201–5206.

2020 | Published | Journal Article | IST-REx-ID: 7814 |

Beattie RJ, Hippenmeyer S, Pauler F. 2020. SCOPES: Sparking curiosity through Open-Source platforms in education and science. Frontiers in Education. 5, 48.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7815 |

Beattie RJ, Streicher C, Amberg N, Cheung GT, Contreras X, Hansen AH, Hippenmeyer S. 2020. Lineage tracing and clonal analysis in developing cerebral cortex using mosaic analysis with double markers (MADM). Journal of Visual Experiments. (159), e61147.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8765 |

Schreck C, Wojtan C. 2020. A practical method for animating anisotropic elastoplastic materials. Computer Graphics Forum. 39(2), 89–99.

[Submitted Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 7805 |

Hurny A, Cuesta C, Cavallari N, Ötvös K, Duclercq J, Dokládal L, Montesinos López JC, Gallemi M, Semerádová H, Rauter T, Stenzel I, Persiau G, Benade F, Bhalearo R, Sýkorová E, Gorzsás A, Sechet J, Mouille G, Heilmann I, De Jaeger G, Ludwig-Müller J, Benková E. 2020. Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance. Nature Communications. 11, 2170.

2020 | Published | Journal Article | IST-REx-ID: 7600 |

Tan S, Zhang X, Kong W, Yang X-L, Molnar G, Vondráková Z, Filepová R, Petrášek J, Friml J, Xue H-W. 2020. The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis. Nature Plants. 6, 556–569.

2020 | Published | Journal Article | IST-REx-ID: 7619 |

Zhang X, Adamowski M, Marhavá P, Tan S, Zhang Y, Rodriguez Solovey L, Zwiewka M, Pukyšová V, Sánchez AS, Raxwal VK, Hardtke CS, Nodzynski T, Friml J. 2020. Arabidopsis flippases cooperate with ARF GTPase exchange factors to regulate the trafficking and polarity of PIN auxin transporters. The Plant Cell. 32(5), 1644–1664.

2020 | Published | Journal Article | IST-REx-ID: 7541 |

Gao F, Wang J-H, Watzinger H, Hu H, Rančić MJ, Zhang J-Y, Wang T, Yao Y, Wang G-L, Kukucka J, Vukušić L, Kloeffel C, Loss D, Liu F, Katsaros G, Zhang J-J. 2020. Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling. Advanced Materials. 32(16), 1906523.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 7472 |

Käfer K, Nardin M, Blahna K, Csicsvari JL. 2020. Replay of behavioral sequences in the medial prefrontal cortex during rule switching. Neuron. 106(1), P154–165.e6.

2020 | Published | Journal Article | IST-REx-ID: 7580 |

Bezeljak, Urban, Stochastic activation and bistability in a Rab GTPase regulatory network. Proceedings of the National Academy of Sciences of the United States of America 117 (12). 2020

[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS

2020 | Published | Journal Article | IST-REx-ID: 7343 |

Milutinovic B, Stock M, Grasse AV, Naderlinger E, Hilbe C, Cremer S. 2020. Social immunity modulates competition between coinfecting pathogens. Ecology Letters. 23(3), 565–574.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Thesis | IST-REx-ID: 7525 |

Bhandari P. 2020. Localization and functional role of Cav2.3 in the medial habenula to interpeduncular nucleus pathway. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7427 |

Tan S, Abas MF, Verstraeten I, Glanc M, Molnar G, Hajny J, Lasák P, Petřík I, Russinova E, Petrášek J, Novák O, Pospíšil J, Friml J. 2020. Salicylic acid targets protein phosphatase 2A to attenuate growth in plants. Current Biology. 30(3), 381–395.e8.

2020 | Published | Journal Article | IST-REx-ID: 7464 |

Dick RA, Xu C, Morado DR, Kravchuk V, Ricana CL, Lyddon TD, Broad AM, Feathers JR, Johnson MC, Vogt VM, Perilla JR, Briggs JAG, Schur FK. 2020. Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly. PLOS Pathogens. 16(1), e1008277.

2020 | Research Data Reference | IST-REx-ID: 9723 |

[Published Version] View | Files available | DOI | Download Published Version (ext.)

2020 | Published | Journal Article | IST-REx-ID: 7490 |

Narasimhan M, Johnson AJ, Prizak R, Kaufmann W, Tan S, Casillas Perez BE, Friml J. 2020. Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants. eLife. 9, e52067.

2020 | Draft | Preprint | IST-REx-ID: 7800 |

Morandell J, Schwarz LA, Basilico B, Tasciyan S, Nicolas A, Sommer CM, Kreuzinger C, Knaus L, Dobler Z, Cacci E, Danzl JG, Novarino G. Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development. bioRxiv, 10.1101/2020.01.10.902064 .

[Preprint] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7253 |

Laukoter S, Beattie RJ, Pauler F, Amberg N, Nakayama KI, Hippenmeyer S. 2020. Imprinted Cdkn1c genomic locus cell-autonomously promotes cell survival in cerebral cortex development. Nature Communications. 11, 195.

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 7252

Borges Merjane C, Kim O, Jonas PM. 2020. Functional Electron Microscopy (“Flash and Freeze”) of Identified Cortical Synapses in Acute Brain Slices. Neuron.

View | DOI

2019 | Published | Journal Article | IST-REx-ID: 7197 |

Dos Santos Caldas PR, Lopez Pelegrin MD, Pearce DJG, Budanur NB, Brugués J, Loose M. 2019. Cooperative ordering of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinker ZapA. Nature Communications. 10, 5744.

[Published Version] View | Files available | DOI | WoS

2019 | Published | Thesis | IST-REx-ID: 7186 |

Schwayer C. 2019. Mechanosensation of tight junctions depends on ZO-1 phase separation and flow. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Thesis | IST-REx-ID: 7172 |

Vasileva MK. 2019. Molecular mechanisms of endomembrane trafficking in Arabidopsis thaliana. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 7026 |

Lukacisin M, Bollenbach MT. 2019. Emergent gene expression responses to drug combinations predict higher-order drug interactions. Cell Systems. 9(5), 423-433.e1-e3.

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6486 |

Kühnen, Jakob, Relaminarization of pipe flow by means of 3D-printed shaped honeycombs. Journal of Fluids Engineering 141 (11). 2019

2019 | Published | Journal Article | IST-REx-ID: 7001 |

Schwayer C, Shamipour S, Pranjic-Ferscha K, Schauer A, Balda M, Tada M, Matter K, Heisenberg C-PJ. 2019. Mechanosensation of tight junctions depends on ZO-1 phase separation and flow. Cell. 179(4), 937–952.e18.

2019 | Draft | Preprint | IST-REx-ID: 10065 |

Hofmann AC, Jirovec D, Borovkov M, Prieto Gonzalez I, Ballabio A, Frigerio J, Chrastina D, Isella G, Katsaros G. Assessing the potential of Ge/SiGe quantum dots as hosts for singlet-triplet qubits. arXiv, 1910.05841.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

2019 | Published | Thesis | IST-REx-ID: 6947 |

Assen FP. 2019. Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 6978 |

Budanur NB, Dogra A, Hof B. 2019. Geometry of transient chaos in streamwise-localized pipe flow turbulence. Physical Review Fluids. 4(10), 102401.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Published | Journal Article | IST-REx-ID: 6897 |

Zhu Q, Gallemi M, Pospíšil J, Žádníková P, Strnad M, Benková E. 2019. Root gravity response module guides differential growth determining both root bending and apical hook formation in Arabidopsis. Development. 146(17), dev175919.

2019 | Published | Journal Article | IST-REx-ID: 6848 |

Kampjut D, Sazanov LA. 2019. Structure and mechanism of mitochondrial proton-translocating transhydrogenase. Nature. 573(7773), 291–295.

2019 | Published | Thesis | IST-REx-ID: 6849 |

Rangel Guerrero DK. 2019. The role of CCK-interneurons in regulating hippocampal network dynamics. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 6859

Zhou L, Sazanov LA. 2019. Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase. Science. 365(6455), eaaw9144.

2019 | Published | Journal Article | IST-REx-ID: 6755 |

Picard, Marion A L, Dosage compensation throughout the Schistosoma mansoni lifecycle: Specific chromatin landscape of the Z chromosome. Genome biology and evolution 11 (7). 2019

2019 | Published | Journal Article | IST-REx-ID: 6442 |

Schreck C, Hafner C, Wojtan C. 2019. Fundamental solutions for water wave animation. ACM Transactions on Graphics. 38(4), 130.

[Submitted Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6609 |

Barzanjeh S, Redchenko E, Peruzzo M, Wulf M, Lewis D, Arnold GM, Fink JM. 2019. Stationary entangled radiation from micromechanical motion. Nature. 570, 480–483.

2019 | Published | Journal Article | IST-REx-ID: 6611 |

Glanc M, Fendrych M, Friml J. 2019. PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton. Biomolecules. 9(6), 222.

2019 | Published | Thesis | IST-REx-ID: 6546 |

Valosková K. 2019. The role of a highly conserved major facilitator superfamily member in Drosophila embryonic macrophage migration. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 6508 |

Shamipour, Shayan, Bulk actin dynamics drive phase segregation in zebrafish oocytes. Cell 177 (6). 2019

2019 | Published | Thesis | IST-REx-ID: 6392 |

Lukacisin M. 2019. Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory. IST Austria.

[Published Version] View | Files available | DOI

2019 | Published | Thesis | IST-REx-ID: 6435 |

Casillas Perez BE. 2019. Collective defenses of garden ants against a fungal pathogen. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 6603 |

Marhavá P, Hörmayer L, Yoshida S, Marhavý P, Benková E, Friml J. 2019. Re-activation of stem cell pathways for pattern restoration in plant wound healing. Cell. 177(4), 957–969.e13.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2019 | Published | Journal Article | IST-REx-ID: 6351 |

Marhavá, Petra, Re-activation of stem cell pathways for pattern restoration in plant wound healing. Cell 177 (4). 2019

2019 | Published | Journal Article | IST-REx-ID: 6328 |

Renkawitz J, Kopf A, Stopp JA, de Vries I, Driscoll MK, Merrin J, Hauschild R, Welf ES, Danuser G, Fiolka R, Sixt MK. 2019. Nuclear positioning facilitates amoeboid migration along the path of least resistance. Nature. 568, 546–550.

2019 | Published | Journal Article | IST-REx-ID: 6418 |

Huylmans AK, Toups MA, Macon A, Gammerdinger WJ, Vicoso B. 2019. Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome. Genome biology and evolution. 11(4), 1033–1044.

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6187 |

Valosková K, Bicher J, Roblek M, Emtenani S, György A, Misova M, Ratheesh A, Rodrigues P, Shkarina K, Larsen ISB, Vakhrushev SY, Clausen H, Siekhaus DE. 2019. A conserved major facilitator superfamily member orchestrates a subset of O-glycosylation to aid macrophage tissue invasion. eLife. 8, e41801.

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6087 |

Xia P, Gütl DJ, Zheden V, Heisenberg C-PJ. 2019. Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity. Cell. 176(6), 1379–1392.e14.

2019 | Published | Journal Article | IST-REx-ID: 6046 |

Mitosch K, Rieckh G, Bollenbach MT. 2019. Temporal order and precision of complex stress responses in individual bacteria. Molecular systems biology. 15(2), e8470.

2019 | Published | Journal Article | IST-REx-ID: 6025 |

Capek D, Smutny M, Tichy AM, Morri M, Janovjak HL, Heisenberg C-PJ. 2019. Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration. eLife. 8, e42093.

[Published Version] View | Files available | DOI | WoS

2019 | Published | Thesis | IST-REx-ID: 6269 |

Narasimhan M. 2019. Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants . Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 5789 |

Petridou, Nicoletta, Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling. Nature Cell Biology 21. 2019

2019 | Published | Journal Article | IST-REx-ID: 7406

Mckenzie C, Spanova M, Johnson AJ, Kainrath S, Zheden V, Sitte HH, Janovjak HL. 2019. Isolation of synaptic vesicles from genetically engineered cultured neurons. Journal of Neuroscience Methods. 312, 114–121.

View | DOI | WoS | PubMed | Europe PMC

2018 | Published | Thesis | IST-REx-ID: 6263 |

Lukacisinova M. 2018. Genetic determinants of antibiotic resistance evolution. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2018 | Published | Journal Article | IST-REx-ID: 3 |

Deliu E, Arecco N, Morandell J, Dotter C, Contreras X, Girardot C, Käsper E, Kozlova A, Kishi K, Chiaradia I, Noh K, Novarino G. 2018. Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition. Nature Neuroscience. 21(12), 1717–1727.

[Submitted Version] View | Files available | DOI | WoS

2018 | Published | Journal Article | IST-REx-ID: 23 |

Vukušić, Lada, Single-shot readout of hole spins in Ge. Nano Letters 18 (11). 2018

2018 | Published | Journal Article | IST-REx-ID: 44 |

Turner CJ, Michailidis A, Abanin DA, Serbyn M, Papić Z. 2018. Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations. Physical Review B. 98(15), 155134.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2018 | Published | Journal Article | IST-REx-ID: 77 |

Watzinger H, Kukucka J, Vukušić L, Gao F, Wang T, Schäffler F, Zhang J, Katsaros G. 2018. A germanium hole spin qubit. Nature Communications. 9(3902).

[Published Version] View | Files available | DOI | WoS

2018 | Published | Journal Article | IST-REx-ID: 134 |

Jeschke S, Skrivan T, Mueller Fischer M, Chentanez N, Macklin M, Wojtan C. 2018. Water surface wavelets. ACM Transactions on Graphics. 37(4), 94.

[Published Version] View | Files available | DOI | WoS

2018 | Published | Journal Article | IST-REx-ID: 15 |

Hons M, Kopf A, Hauschild R, Leithner AF, Gärtner FR, Abe J, Renkawitz J, Stein J, Sixt MK. 2018. Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells. Nature Immunology. 19(6), 606–616.

2018 | Published | Journal Article | IST-REx-ID: 308 |

Ratheesh A, Bicher J, Smutny M, Veselá J, Papusheva E, Krens G, Kaufmann W, György A, Casano AM, Siekhaus DE. 2018. Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage invasive migration. Developmental Cell. 45(3), 331–346.

2018 | Published | Thesis | IST-REx-ID: 323 |

Leithner AF. 2018. Branched actin networks in dendritic cell biology. Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2018 | Published | Journal Article | IST-REx-ID: 402 |

Brown M, Assen FP, Leithner AF, Abe J, Schachner H, Asfour G, Bagó Horváth Z, Stein J, Uhrin P, Sixt MK, Kerjaschki D. 2018. Lymph node blood vessels provide exit routes for metastatic tumor cell dissemination in mice. Science. 359(6382), 1408–1411.

2018 | Published | Journal Article | IST-REx-ID: 328 |

Choueiri GH, Lopez Alonso JM, Hof B. 2018. Exceeding the asymptotic limit of polymer drag reduction. Physical Review Letters. 120(12), 124501.

[Preprint] View | DOI | Download Preprint (ext.) | WoS

2018 | Published | Journal Article | IST-REx-ID: 326 |

Sawada K, Kawakami R, Shigemoto R, Nemoto T. 2018. Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices. European Journal of Neuroscience. 47(9), 1033–1042.

[Published Version] View | Files available | DOI | WoS

2018 | Published | Journal Article | IST-REx-ID: 544 |

György A, Roblek M, Ratheesh A, Valosková K, Belyaeva V, Wachner S, Matsubayashi Y, Sanchez Sanchez B, Stramer B, Siekhaus DE. 2018. Tools allowing independent visualization and genetic manipulation of Drosophila melanogaster macrophages and surrounding tissues. G3: Genes, Genomes, Genetics. 8(3), 845–857.

[Published Version] View | Files available | DOI | WoS

2018 | Published | Thesis | IST-REx-ID: 395 |

Tarlungeanu D-C. 2018. The branched chain amino acids in autism spectrum disorders . Institute of Science and Technology Austria.

[Published Version] View | Files available | DOI

2018 | Published | Journal Article | IST-REx-ID: 503

Tomasek K, Bergmiller T, Guet CC. 2018. Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains. Journal of Biotechnology. 268, 40–52.

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2018 | Published | Journal Article | IST-REx-ID: 437 |

Leithner AF, Renkawitz J, de Vries I, Hauschild R, Haecker H, Sixt MK. 2018. Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration. European Journal of Immunology. 48(6), 1074–1077.

[Published Version] View | Files available | DOI | WoS

2017 | Published | Book Chapter | IST-REx-ID: 1213

Baranova, Natalia, Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers. Cytokinesis 137. 2017

View | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 749 |

Chen, Chong, Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses. Cell Reports 21 (8). 2017

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 804 |

Schmalhorst, Philipp S, Overcoming the limitations of the MARTINI force field in simulations of polysaccharides. Journal of Chemical Theory and Computation 13 (10). 2017

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

2017 | Published | Journal Article | IST-REx-ID: 727

Mueller, Jan, Load adaptation of lamellipodial actin networks. Cell 171 (1). 2017

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2017 | Published | Journal Article | IST-REx-ID: 803 |

Samwer, Matthias, DNA cross-bridging shapes a single nucleus from a set of mitotic chromosomes. Cell 170 (5). 2017

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 840 |

Vukusic, Lada, Fast hole tunneling times in germanium hut wires probed by single-shot reflectometry. Nano Letters 17 (9). 2017

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 470 |

Jeschke S, Wojtan C. 2017. Water wave packets. ACM Transactions on Graphics. 36(4), 103.

[Published Version] View | Files available | DOI

2017 | Published | Journal Article | IST-REx-ID: 946 |

von Wangenheim D, Hauschild R, Fendrych M, Barone V, Benková E, Friml J. 2017. Live tracking of moving samples in confocal microscopy for vertically grown roots. eLife. 6, e26792.

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 944

Beattie RJ, Postiglione MP, Burnett L, Laukoter S, Streicher C, Pauler F, Xiao G, Klezovitch O, Vasioukhin V, Ghashghaei T, Hippenmeyer S. 2017. Mosaic analysis with double markers reveals distinct sequential functions of Lgl1 in neural stem cells. Neuron. 94(3), 517–533.e3.

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2017 | Published | Journal Article | IST-REx-ID: 661 |

Smutny, Michael, Friction forces position the neural anlage. Nature Cell Biology 19. 2017

2017 | Published | Journal Article | IST-REx-ID: 1067 |

Morita, Hitoshi, The physical basis of coordinated tissue spreading in zebrafish gastrulation. Developmental Cell 40 (4). 2017

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 1087 |

Song, Baofang, Speed and structure of turbulent fronts in pipe flow. Journal of Fluid Mechanics 813. 2017

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

2017 | Published | Journal Article | IST-REx-ID: 1118 |

Gan J, Weng S-M, Pernia-Andrade A, Csicsvari JL, Jonas PM. 2017. Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo. Neuron. 93(2), 308–314.

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 1078 |

von Wangenheim D, Hauschild R, Friml J. 2017. Light sheet fluorescence microscopy of plant roots growing on the surface of a gel. Journal of visualized experiments JoVE. 2017(119), e55044.

[Published Version] View | Files available | DOI | WoS

2017 | Published | Journal Article | IST-REx-ID: 1117 |

Chen, Chong, Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse. Cell Reports 18 (3). 2017

[Published Version] View | Files available | DOI | WoS

2016 | Published | Journal Article | IST-REx-ID: 1323 |

Vyleta N, Borges Merjane C, Jonas PM. 2016. Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. eLife. 5, e17977.

[Published Version] View | Files available | DOI

2016 | Published | Journal Article | IST-REx-ID: 1321 |

Leithner AF, Eichner A, Müller J, Reversat A, Brown M, Schwarz J, Merrin J, De Gorter D, Schur FK, Bayerl J, de Vries I, Wieser S, Hauschild R, Lai F, Moser M, Kerjaschki D, Rottner K, Small V, Stradal T, Sixt MK. 2016. Diversified actin protrusions promote environmental exploration but are dispensable for locomotion of leukocytes. Nature Cell Biology. 18, 1253–1259.

[Submitted Version] View | Files available | DOI

2016 | Published | Journal Article | IST-REx-ID: 1350 |

Guzmán J, Schlögl A, Frotscher M, Jonas PM. 2016. Synaptic mechanisms of pattern completion in the hippocampal CA3 network. Science. 353(6304), 1117–1123.

[Preprint] View | Files available | DOI

2016 | Published | Journal Article | IST-REx-ID: 1271 |

Diz Muñoz A, Romanczuk P, Yu W, Bergert M, Ivanovitch K, Salbreux G, Heisenberg C-PJ, Paluch E. 2016. Steering cell migration by alternating blebs and actin-rich protrusions. BMC Biology. 14(1), 74.

[Published Version] View | Files available | DOI

2016 | Published | Book Chapter | IST-REx-ID: 1094

Harada H, Shigemoto R. 2016.Immunogold protein localization on grid-glued freeze-fracture replicas. In: High-Resolution Imaging of Cellular Proteins. Methods in Molecular Biology, vol. 1474, 203–216.

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2016 | Published | Journal Article | IST-REx-ID: 1100 |

Sako K, Pradhan S, Barone V, Inglés Prieto Á, Mueller P, Ruprecht V, Capek D, Galande S, Janovjak HL, Heisenberg C-PJ. 2016. Optogenetic control of nodal signaling reveals a temporal pattern of nodal signaling regulating cell fate specification during gastrulation. Cell Reports. 16(3), 866–877.

[Published Version] View | Files available | DOI

2016 | Published | Conference Paper | IST-REx-ID: 1363 |

Bojsen-Hansen M, Wojtan C. 2016. Generalized non-reflecting boundaries for fluid re-simulation. ACM SIGGRAPH, ACM Transactions on Graphics, vol. 35, 96.

[Published Version] View | Files available | DOI

2016 | Published | Thesis | IST-REx-ID: 1129 |

Schwarz J. 2016. Quantitative analysis of haptotactic cell migration. Institute of Science and Technology Austria.

[Published Version] View | Files available

2016 | Published | Journal Article | IST-REx-ID: 1492 |

Marhavý P, Montesinos López JC, Abuzeineh A, Van Damme D, Vermeer J, Duclercq J, Rakusova H, Marhavá P, Friml J, Geldner N, Benková E. 2016. Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation. Genes and Development. 30(4), 471–483.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2016 | Published | Journal Article | IST-REx-ID: 1599 |

Kiermaier E, Moussion C, Veldkamp C, Gerardy Schahn R, de Vries I, Williams L, Chaffee G, Phillips A, Freiberger F, Imre R, Taleski D, Payne R, Braun A, Förster R, Mechtler K, Mühlenhoff M, Volkman B, Sixt MK. 2016. Polysialylation controls dendritic cell trafficking by regulating chemokine recognition. Science. 351(6269), 186–190.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC

2016 | Published | Journal Article | IST-REx-ID: 1597

Schwarz J, Sixt MK. 2016. Quantitative analysis of dendritic cell haptotaxis. Methods in Enzymology. 570, 567–581.

View | DOI | PubMed | Europe PMC

2015 | Published | Journal Article | IST-REx-ID: 1537 |

Ruprecht V, Wieser S, Callan Jones A, Smutny M, Morita H, Sako K, Barone V, Ritsch Marte M, Sixt MK, Voituriez R, Heisenberg C-PJ. 2015. Cortical contractility triggers a stochastic switch to fast amoeboid cell motility. Cell. 160(4), 673–685.

[Published Version] View | Files available | DOI

2015 | Published | Journal Article | IST-REx-ID: 1993 |

Konrad M, Grasse AV, Tragust S, Cremer S. 2015. Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host. Proceedings of the Royal Society of London Series B Biological Sciences. 282(1799), 20141976.

2015 | Published | Journal Article | IST-REx-ID: 1640 |

Šimášková M, O’Brien J, Khan-Djamei M, Van Noorden G, Ötvös K, Vieten A, De Clercq I, Van Haperen J, Cuesta C, Hoyerová K, Vanneste S, Marhavý P, Wabnik KT, Van Breusegem F, Nowack M, Murphy A, Friml J, Weijers D, Beeckman T, Benková E. 2015. Cytokinin response factors regulate PIN-FORMED auxin transporters. Nature Communications. 6, 8717.

[Submitted Version] View | Files available | DOI

2014 | Published | Thesis | IST-REx-ID: 1403

Behrndt M. 2014. Forces driving epithelial spreading in zebrafish epiboly. IST Austria.

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2013 | Published | Journal Article | IST-REx-ID: 2282 |

Campinho P, Behrndt M, Ranft J, Risler T, Minc N, Heisenberg C-PJ. 2013. Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly. Nature Cell Biology. 15, 1405–1414.

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)

2013 | Published | Thesis | IST-REx-ID: 1406

Campinho P. 2013. Mechanics of zebrafish epiboly: Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading. Institute of Science and Technology Austria.

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2013 | Published | Journal Article | IST-REx-ID: 2944

Aeschbacher S, Futschik A, Beaumont M. 2013. Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates. . Molecular Ecology. 22(4), 987–1002.

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2012 | Published | Journal Article | IST-REx-ID: 2962 |

Aeschbacher S, Beaumont M, Futschik A. 2012. A novel approach for choosing summary statistics in approximate Bayesian computation. Genetics. 192(3), 1027–1047.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC

2012 | Published | Journal Article | IST-REx-ID: 2951

Maître J-L, Berthoumieux H, Krens G, Salbreux G, Julicher F, Paluch E, Heisenberg C-PJ. 2012. Adhesion functions in cell sorting by mechanically coupling the cortices of adhering cells. Science. 338(6104), 253–256.

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2012 | Published | Journal Article | IST-REx-ID: 2950

Behrndt M, Salbreux G, Campinho P, Hauschild R, Oswald F, Roensch J, Grill S, Heisenberg C-PJ. 2012. Forces driving epithelial spreading in zebrafish gastrulation. Science. 338(6104), 257–260.

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2011 | Published | Journal Article | IST-REx-ID: 3396 |

Stockinger P, Heisenberg C-PJ, Maître J-L. 2011. Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube. Development. 138(21), 4673–4683.

[Published Version] View | Files available | DOI

2010 | Published | Journal Article | IST-REx-ID: 4157 |

Papusheva E, Heisenberg C-PJ. 2010. Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis. EMBO Journal. 29(16), 2753–2768.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC

2022 | Thesis | IST-REx-ID: 11896

Artner C. 2022. Modulation of auxin transport via ZF proteins adjust plant response to high ambient temperature. IST Austria .

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2023 | Research Data | IST-REx-ID: 12373 |

Gupta D, Sumser AL, Jösch MA. 2023. Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields, ISTA.

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